EY702992

Overview
NameEY702992
Unique NameEY702992
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY702992_ssr848 microsatellite EY702992_ssr848:848..859. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: CTR1_ARATH (Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana GN=CTR1 PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.722e-39
Identity = 78/121 (64.46%), Postives = 98/121 (80.99%), Query Frame = 3
Query:   39 WTVKVGDFGLSRLKHETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 401
            +TVKV DFGLSRLK  T L++K+  GTP+WMAPEVLR+EPS+EKSDVYSFGVILWELAT + PW NLN  QV+ AVGF  +RLEIP++++P+ AAI+E CW ++P  RPSF  ++D LR L
Sbjct:  688 YTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPL 808          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: DRKC_DICDI (Probable serine/threonine-protein kinase drkC OS=Dictyostelium discoideum GN=drkC PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.377e-25
Identity = 54/122 (44.26%), Postives = 76/122 (62.30%), Query Frame = 3
Query:   33 QHWTVKVGDFGLSRL--KHETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 392
            +H+ VK+ DFGLS    KH    T  T  GTP W APEVLRN+P  EK+DV+SF ++LWE+ T + P+  + + Q++ +VG    R  +P  V   +  ++  CW  DPQ RPSFQE+V +L
Sbjct:  625 EHYRVKISDFGLSTRFKKHLDKKTAMTPVGTPCWTAPEVLRNDPYTEKADVFSFAIVLWEIVTREDPYQGMPTFQIVISVGQHKLRPIVPPQVSAPFTRLITECWSEDPQQRPSFQEIVKRL 746          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: Y9955_DICDI (Probable serine/threonine-protein kinase DDB_G0267514 OS=Dictyostelium discoideum GN=DDB_G0267514 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.951e-23
Identity = 53/123 (43.09%), Postives = 83/123 (67.48%), Query Frame = 3
Query:   33 QHWTVKVGDFGLSRLKHETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 401
            +H  VK+ DFGLS+LK +++  TK+  G+P WM+PE+L  E   EK DVY+FG+ILWEL T ++P+  L+S+Q+  AV   + R  IP     + + ++++CWH DP  RPSF E+++ L ++
Sbjct:  794 EHMNVKICDFGLSKLKSKSTEMTKS-IGSPIWMSPELLMGEDYTEKVDVYAFGIILWELGTGELPYSGLDSVQLALAVTTKSLRPPIPNAWPYQLSHLIQACWHQDPLKRPSFTEILNLLNEI 915          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: DRKD_DICDI (Probable serine/threonine-protein kinase drkD OS=Dictyostelium discoideum GN=drkD PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.573e-23
Identity = 53/133 (39.85%), Postives = 82/133 (61.65%), Query Frame = 3
Query:   39 WTVKVGDFGLSRLKHETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTV 437
            W VKV DFGL+ +K  T    KT  GT  W+APEVL  E   EK+DVYS+ ++LWEL T  IP+   N+MQV+ ++    +RL +P    P++AA++  CW +DP  RPSF E++  +  +  ++ +  + ++
Sbjct:  986 WQVKVADFGLATVKSHTF--AKTMCGTTGWVAPEVLAEEGYTEKADVYSYAIVLWELLTRLIPYAGKNTMQVVRSID-RGERLPMPAWCPPKYAALMNRCWETDPTHRPSFPEILPIMEGMISEFQKEKKESI 1115          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: SHKD_DICDI (Dual specificity protein kinase shkD OS=Dictyostelium discoideum GN=shkD PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.585e-23
Identity = 50/120 (41.67%), Postives = 74/120 (61.67%), Query Frame = 3
Query:   45 VKVGDFGLSRLKHETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQV-IGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 401
            VKV DFG S++K       K  KGTP WMAPEV+   P +EK+DVYSFG+ILWE+ T++ P+ +     +   A+    +R  IP D  P    ++++CW  +PQ RPSF E++ +L ++
Sbjct:  414 VKVTDFGFSQIKEGEEFQDKAAKGTPLWMAPEVMMGNPYNEKADVYSFGIILWEILTKEAPYSHHKDYDIFFNAICNEKERPPIPADTLPSLRHLIQTCWDHNPQNRPSFSEILFRLNEI 533          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: DRKB_DICDI (Probable serine/threonine-protein kinase drkB OS=Dictyostelium discoideum GN=drkB PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.114e-21
Identity = 51/128 (39.84%), Postives = 80/128 (62.50%), Query Frame = 3
Query:   33 QHWTVKVGDFGLSRLKHETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 416
            ++W VKV DFGLS ++ + +  T T  GTP W +PEVLR++   EK+DVYSFG+ILWE AT + P+  +   QVI AVG    R   PK   P++  +++ C + +P  RP+ ++ ++ L  ++ + F
Sbjct:  524 ENWKVKVADFGLSTIEQQGA--TMTACGTPCWTSPEVLRSQRYTEKADVYSFGIILWECATRQDPYFGIPPFQVIFAVGREGMRPPTPKYGPPKYIQLLKDCLNENPSQRPTMEQCLEILESIETKGF 649          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: DRKA_DICDI (Probable serine/threonine-protein kinase drkA OS=Dictyostelium discoideum GN=drkA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.114e-21
Identity = 49/123 (39.84%), Postives = 79/123 (64.23%), Query Frame = 3
Query:   33 QHWTVKVGDFGLSRLKHETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 401
            ++W VKV DFGLS ++ + +  T T  GTP W +PEVLR++   EK+DVYSFG+ILWE AT + P+  +   QVI AVG    R  +P++  P++  ++  C + +P  RP+ ++ +++L  +
Sbjct:  507 ENWKVKVADFGLSTIEQQGA--TMTACGTPCWTSPEVLRSQRYTEKADVYSFGIILWECATRQDPYFGIPPFQVIFAVGREGMRPPVPQNGPPKYIQLLIDCLNENPSHRPTMEQCLERLESI 627          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: M3K12_MOUSE (Mitogen-activated protein kinase kinase kinase 12 OS=Mus musculus GN=Map3k12 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.762e-21
Identity = 53/134 (39.55%), Postives = 80/134 (59.70%), Query Frame = 3
Query:   45 VKVGDFGLSRLKHETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELV--------DKLRDLQRQYFQA 422
            VK+ DFG S+   + S T  +  GT  WMAPEV+RNEP  EK D++SFGV+LWEL T +IP+ +++S  +I  VG  +  L +P      +  ++  CW+S P+ RPSF++++        D L   Q  YF++
Sbjct:  283 VKISDFGTSKELSDKS-TKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSSCPDGFKILLRQCWNSKPRNRPSFRQILLHLDIASADVLSTPQETYFKS 415          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: M3K12_HUMAN (Mitogen-activated protein kinase kinase kinase 12 OS=Homo sapiens GN=MAP3K12 PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 2.762e-21
Identity = 53/134 (39.55%), Postives = 80/134 (59.70%), Query Frame = 3
Query:   45 VKVGDFGLSRLKHETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELV--------DKLRDLQRQYFQA 422
            VK+ DFG S+   + S T  +  GT  WMAPEV+RNEP  EK D++SFGV+LWEL T +IP+ +++S  +I  VG  +  L +P      +  ++  CW+S P+ RPSF++++        D L   Q  YF++
Sbjct:  250 VKISDFGTSKELSDKS-TKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSSCPDGFKILLRQCWNSKPRNRPSFRQILLHLDIASADVLSTPQETYFKS 382          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: M313A_XENLA (Mitogen-activated protein kinase kinase kinase 13-A OS=Xenopus laevis GN=map3k13-A PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.762e-21
Identity = 54/135 (40.00%), Postives = 81/135 (60.00%), Query Frame = 3
Query:   42 TVKVGDFGLSRLKHETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELV--------DKLRDLQRQYFQA 422
            TVK+ DFG S+   + S T  +  GT  WMAPEV+RNEP  EK D++SFGV+LWEL T +IP+ +++S  +I  VG  +  L +P      +  +++  WHS P+ RPSF++++        D L   Q  YF++
Sbjct:  293 TVKISDFGTSKELSDKS-TKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVLLWELLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKILMKQTWHSKPRNRPSFRQILMHLDIASADVLGTPQETYFKS 426          
The following BLAST results are available for this feature:
BLAST of EY702992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 311
Match NameE-valueIdentityDescription
CTR1_ARATH1.722e-3964.46Serine/threonine-protein kinase CTR1 OS=Arabidopsi... [more]
DRKC_DICDI5.377e-2544.26Probable serine/threonine-protein kinase drkC OS=D... [more]
Y9955_DICDI2.951e-2343.09Probable serine/threonine-protein kinase DDB_G0267... [more]
DRKD_DICDI6.573e-2339.85Probable serine/threonine-protein kinase drkD OS=D... [more]
SHKD_DICDI8.585e-2341.67Dual specificity protein kinase shkD OS=Dictyostel... [more]
DRKB_DICDI2.114e-2139.84Probable serine/threonine-protein kinase drkB OS=D... [more]
DRKA_DICDI2.114e-2139.84Probable serine/threonine-protein kinase drkA OS=D... [more]
M3K12_MOUSE2.762e-2139.55Mitogen-activated protein kinase kinase kinase 12 ... [more]
M3K12_HUMAN2.762e-2139.55Mitogen-activated protein kinase kinase kinase 12 ... [more]
M313A_XENLA2.762e-2140.00Mitogen-activated protein kinase kinase kinase 13-... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-014-F02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702992 ID=EY702992; Name=EY702992; organism=Citrus sinensis; type=EST; length=906bp
TCCTCGACCCACGCGTCCGATCTTCTAGTTCCCAACACTGGACTGTCAAG
GTTGGTGATTTTGGTCTGTCACGTCTCAAGCATGAGACATCTCTCACCAC
CAAGACTGGGAAGGGAACTCCTCAATGGATGGCACCGGAAGTTCTCCGAA
ATGAACCCTCCGATGAGAAGTCTGATGTATACAGCTTTGGAGTTATATTA
TGGGAGCTCGCCACTGAGAAGATCCCTTGGGATAATCTCAACTCAATGCA
GGTGATTGGAGCTGTAGGGTTCATGAACCAACGCTTAGAGATCCCAAAAG
ATGTGGATCCACGGTGGGCTGCTATAGTTGAGAGCTGCTGGCACAGTGAT
CCACAGTGCAGGCCATCATTTCAGGAACTGGTGGACAAGCTTCGAGATCT
GCAGAGACAATACTTCCAGGCATCTCGATCAACAGTAGGAGATAGCACCC
AGAAGGAATTGTAGACCATATTCACATTGTTTCCCTGTTCCGTTGCTGAA
ACACACGTCATTGCAAGTAGAAGAATCAGGCATTATTTTTCACAAAAGAT
TTACTTTCTTGGCTGGTAAACAGCTGGTTACAACAGATTTGCCACTCAAA
AGGCTTGAGCTATTGGCCCCGCATAATTCACAGCTACCAGACAATGAAAG
ATAGTAAGAAAAAAAGTTTATAAAGCCAAAGGGTGGGTAGTTGGCATAAT
GTGAGCTGCCTAATTTTGATGGTGATTGCTTTGCCAGTTTGCCTGGCTGG
GAAAGGTTATTTTTTTATATAACTGGTGTGCAAAAATCTTCAGATACTGT
CCGACCGGCTTTGTGTACTGGAACCATGTTTGGCTGAATTACCTTTTTAA
ATAAATAAAAAAAGGCGGCGCGCCCTAAGGATCCAATTTCGTCCCCGGTC
ATGGGA
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