EY702990

Overview
NameEY702990
Unique NameEY702990
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length946
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702990 vs. ExPASy Swiss-Prot
Match: AB6I_ARATH (ABC transporter I family member 6, chloroplastic OS=Arabidopsis thaliana GN=ABCI6 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.078e-31
Identity = 92/200 (46.00%), Postives = 123/200 (61.50%), Query Frame = 1
Query:   79 MAAFLPSTSCCSFKFSNPP---SKSHVFTLPALPLLCR-RSNYHRHHL---SLNRVTAALSAVDSPLKSSS--EGQDEKSQ-PLLQVTGLTAVIAESKQEILKGVNLLVNQGEAHAIMGKNGSGKSTLSKVLVGHPDYEVTQGSVLIKGDNLLQMDPEERSLACTY--FESPFTTSNPRSPHHSTYFTWPYSARGKKLRQ 642
            +A F+P+ S      S PP    +  + T P+  LLC  R+N     +   +   V  + S+V S + S S  E +D+  + PLL+V  L AVIAES+QEILKGVNL+V +GE HA+MGKNGSGKST SKVLVGHPDYEVT GS++ KG NLL M+PE+RSLA  +  F+SP          +  +    ++AR +KL Q
Sbjct:   14 IAQFVPTVS------SPPPLPTQRVRLGTSPSRVLLCNLRANSAAAPILRTTRRSVIVSASSVSSAVDSDSLVEDRDDVGRIPLLEVRDLRAVIAESRQEILKGVNLVVYEGEVHAVMGKNGSGKSTFSKVLVGHPDYEVTGGSIVFKGQNLLDMEPEDRSLAGLFMSFQSPVEIP---GVSNMDFLNMAFNARKRKLGQ 204          
BLAST of EY702990 vs. ExPASy Swiss-Prot
Match: Y075_SYNY3 (Probable ATP-dependent transporter slr0075 OS=Synechocystis sp. (strain PCC 6803) GN=slr0075 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.109e-19
Identity = 51/116 (43.97%), Postives = 72/116 (62.07%), Query Frame = 1
Query:  289 SQPLLQVTGLTAVIAESKQEILKGVNLLVNQGEAHAIMGKNGSGKSTLSKVLVGHPDYEVTQGSVLIKGDNLLQMDPEERSLACTYFESPFTTSNPRSPHHSTYFTWPYSARGKKL 636
            SQ +L +  LTA +     +ILKGVNL +  GE HAIMG+NGSGKSTLSKV+ GHPDYE+T G ++ +G +L  ++P ER+LA  +    +    P    +  +    Y+A+ K L
Sbjct:    2 SQTILSIKNLTASV--DGNQILKGVNLEIKAGEVHAIMGRNGSGKSTLSKVITGHPDYEITGGEIIYQGQDLSALEPHERALAGIFLAFQYPLEIP-GVSNLDFLRIAYNAKRKHL 114          
BLAST of EY702990 vs. ExPASy Swiss-Prot
Match: ABCX_CYAPA (Probable ATP-dependent transporter ycf16 OS=Cyanophora paradoxa GN=ycf16 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 8.015e-19
Identity = 47/80 (58.75%), Postives = 59/80 (73.75%), Query Frame = 1
Query:  298 LLQVTGLTAVIAESKQEILKGVNLLVNQGEAHAIMGKNGSGKSTLSKVLVGHPDYEVTQGSVLIKGDNLLQMDPEERSLA 537
            +L+V  L A +  +  EILKGVNL +N GE HAIMG NGSGKST SK+L GHP Y+VT G +L K  NLL+++PEER+ A
Sbjct:    8 ILEVKNLKAQVDGT--EILKGVNLTINSGEIHAIMGPNGSGKSTFSKILAGHPAYQVTGGEILFKNKNLLELEPEERARA 85          
BLAST of EY702990 vs. ExPASy Swiss-Prot
Match: ABCX_ODOSI (Probable ATP-dependent transporter ycf16 OS=Odontella sinensis GN=ycf16 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.786e-18
Identity = 45/79 (56.96%), Postives = 58/79 (73.42%), Query Frame = 1
Query:  295 PLLQVTGLTAVIAESKQEILKGVNLLVNQGEAHAIMGKNGSGKSTLSKVLVGHPDYEVTQGSVLIKGDNLLQMDPEERS 531
            P+L++  L A I E+  EILK +NL +++GE HAIMG NGSGKST SKVL GHP Y +  G +L KG ++L +DPEERS
Sbjct:    6 PILEIKNLKACINEN--EILKDLNLKIHKGEIHAIMGPNGSGKSTFSKVLAGHPAYNILSGDILFKGSSILNLDPEERS 82          
BLAST of EY702990 vs. ExPASy Swiss-Prot
Match: ABCX_GUITH (Probable ATP-dependent transporter ycf16 OS=Guillardia theta GN=ycf16 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.578e-17
Identity = 41/78 (52.56%), Postives = 59/78 (75.64%), Query Frame = 1
Query:  298 LLQVTGLTAVIAESKQEILKGVNLLVNQGEAHAIMGKNGSGKSTLSKVLVGHPDYEVTQGSVLIKGDNLLQMDPEERS 531
            +L+VT L A + E K  I+KG+NL+VN GE HAIMGKNGSGKST +K++ GHPDY +T G +  +  ++L++ PE+R+
Sbjct:    5 ILEVTNLHAAVNEIK--IVKGLNLVVNAGEIHAIMGKNGSGKSTFAKIIAGHPDYTITNGDITYQHTSILELTPEDRA 80          
BLAST of EY702990 vs. ExPASy Swiss-Prot
Match: ABCX_PORYE (Probable ATP-dependent transporter ycf16 OS=Porphyra yezoensis GN=ycf16 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.502e-17
Identity = 44/96 (45.83%), Postives = 62/96 (64.58%), Query Frame = 1
Query:  289 SQPLLQVTGLTAVIAESKQEILKGVNLLVNQGEAHAIMGKNGSGKSTLSKVLVGHPDYEVTQGSVLIKGDNLLQMDPEERSLACTYFESPFTTSNP 576
            SQ +L++  L A + E+   ILKGVNL +  GE HAIMG NGSGKSTLSKV+ GHP Y +  G +L  G ++L+++P+ER+ A  +    +    P
Sbjct:    2 SQTILEIKDLYASVGETT--ILKGVNLSIRAGEIHAIMGPNGSGKSTLSKVIAGHPAYSLISGDILFFGQSILEIEPDERAKAGIFLAFQYPVEIP 95          
BLAST of EY702990 vs. ExPASy Swiss-Prot
Match: ABCX_GALSU (Probable ATP-dependent transporter ycf16 OS=Galdieria sulphuraria GN=ycf16 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.851e-16
Identity = 42/82 (51.22%), Postives = 57/82 (69.51%), Query Frame = 1
Query:  286 KSQPLLQVTGLTAVIAESKQEILKGVNLLVNQGEAHAIMGKNGSGKSTLSKVLVGHPDYEVTQGSVLIKGDNLLQMDPEERS 531
            K + LLQ+  L   +A +++ IL G+NL VNQGE HAIMG NGSGKSTLSKV+ GH  Y+V +G ++ +  NLL    E+R+
Sbjct:    2 KHKSLLQIKNLHVKLANTEEYILNGINLNVNQGEIHAIMGPNGSGKSTLSKVIAGHSLYKVVKGEIIFQDQNLLNYTIEDRA 83          
BLAST of EY702990 vs. ExPASy Swiss-Prot
Match: ABCX_PORPU (Probable ATP-dependent transporter ycf16 OS=Porphyra purpurea GN=ycf16 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.415e-15
Identity = 51/132 (38.64%), Postives = 75/132 (56.82%), Query Frame = 1
Query:  289 SQPLLQVTGLTAVIAESKQEILKGVNLLVNQGEAHAIMGKNGSGKSTLSKVLVGHPDYEVTQGSVLIKGDNLLQMDPEERSLACTYFESPFTTSNPRSPHHSTYFTWPYSARGKKLRQL*NCTILLFIATFT 684
            S  +L++  L A + +    ILKGVNL +  GE HAIMG NGSGKSTLSKV+ GHP Y +  G +L  G ++L+M+P+ER+ A  +    +    P    ++ +     +AR +K R+L   + L F    T
Sbjct:    2 SDYILEIKDLHASVNDVP--ILKGVNLSIKPGEIHAIMGPNGSGKSTLSKVIAGHPAYSLLNGDILFYGRSILKMEPDERARAGIFLAFQYPVEIP-GVSNADFLRIALNAR-RKFRELPELSPLEFFQLIT 129          
BLAST of EY702990 vs. ExPASy Swiss-Prot
Match: ABCX_ANTSP (Probable ATP-dependent transporter ycf16 OS=Antithamnion sp. GN=ycf16 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.848e-15
Identity = 38/78 (48.72%), Postives = 55/78 (70.51%), Query Frame = 1
Query:  298 LLQVTGLTAVIAESKQEILKGVNLLVNQGEAHAIMGKNGSGKSTLSKVLVGHPDYEVTQGSVLIKGDNLLQMDPEERS 531
            LL +  L   I E+  +IL  +NL +  GE HAIMGKNGSGKSTL+KV+ GHP Y++T G +L +  ++ +++PE+RS
Sbjct:    6 LLNIKNLDVTIGET--QILNSLNLSIKPGEIHAIMGKNGSGKSTLAKVIAGHPSYKITNGQILFENQDVTEIEPEDRS 81          
BLAST of EY702990 vs. ExPASy Swiss-Prot
Match: V296_BACSU (Vegetative protein 296 OS=Bacillus subtilis GN=yurY PE=1 SV=3)

HSP 1 Score: 82.4185 bits (202), Expect = 4.116e-15
Identity = 37/65 (56.92%), Postives = 52/65 (80.00%), Query Frame = 1
Query:  343 QEILKGVNLLVNQGEAHAIMGKNGSGKSTLSKVLVGHPDYEVTQGSVLIKGDNLLQMDPEERSLA 537
            +EILKGVNL +  GE HA+MG NG+GKSTLS  ++GHP YEVT+GS+ + G ++L+M+ +ER+ A
Sbjct:   18 KEILKGVNLEIKGGEFHAVMGPNGTGKSTLSAAIMGHPKYEVTKGSITLDGKDVLEMEVDERAQA 82          
The following BLAST results are available for this feature:
BLAST of EY702990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
AB6I_ARATH1.078e-3146.00ABC transporter I family member 6, chloroplastic O... [more]
Y075_SYNY32.109e-1943.97Probable ATP-dependent transporter slr0075 OS=Syne... [more]
ABCX_CYAPA8.015e-1958.75Probable ATP-dependent transporter ycf16 OS=Cyanop... [more]
ABCX_ODOSI1.786e-1856.96Probable ATP-dependent transporter ycf16 OS=Odonte... [more]
ABCX_GUITH2.578e-1752.56Probable ATP-dependent transporter ycf16 OS=Guilla... [more]
ABCX_PORYE7.502e-1745.83Probable ATP-dependent transporter ycf16 OS=Porphy... [more]
ABCX_GALSU2.851e-1651.22Probable ATP-dependent transporter ycf16 OS=Galdie... [more]
ABCX_PORPU1.415e-1538.64Probable ATP-dependent transporter ycf16 OS=Porphy... [more]
ABCX_ANTSP1.848e-1548.72Probable ATP-dependent transporter ycf16 OS=Antith... [more]
V296_BACSU4.116e-1556.92Vegetative protein 296 OS=Bacillus subtilis GN=yur... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-014-E12-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702990 ID=EY702990; Name=EY702990; organism=Citrus sinensis; type=EST; length=946bp
CTCCTTTCAATGGTACCCTGCATGTCCGGGCCGGAATTCCTCAAAAAAGC
AGNCGTCCGGCCTAACGTCACCACTAAGATGGCTGCATTTCTACCCAGCA
CCTCTTGTTGTTCATTCAAATTCTCAAACCCACCCTCTAAATCTCACGTG
TTTACTCTTCCCGCCCTTCCCCTTCTCTGTCGCCGGTCAAACTACCATCG
TCACCATCTATCTCTCAACCGCGTAACAGCCGCCCTCTCCGCCGTCGATT
CCCCTTTGAAATCTTCCTCCGAGGGTCAGGATGAGAAAAGCCAGCCTCTG
CTTCAAGTCACAGGCTTAACGGCCGTGATCGCAGAGTCCAAGCAGGAAAT
TCTCAAGGGCGTCAATCTCTTGGTCAACCAAGGAGAGGCTCATGCGATCA
TGGGAAAGAACGGTTCTGGGAAGAGCACTCTTTCAAAGGTTCTGGTTGGG
CATCCGGATTATGAAGTGACACAAGGGAGTGTCCTGATTAAAGGTGATAA
TCTTCTACAAATGGACCCAGAAGAACGCTCGCTTGCCTGTACATATTTTG
AGTCTCCATTCACCACTTCGAACCCCCGAAGTCCACATCACTCCACTTAC
TTCACATGGCCTTATAGTGCTCGTGGAAAAAAACTGCGTCAACTCTGAAA
CTGCACCATTTTGCTTTTCATCGCTACCTTTACCCTTCACCTCAAACCGG
TCGAGCCTTAGAGACTGACTATTGNTAAGTGAAGGTGTGTATGCAGGCGG
TGTGCGTTACGGTGAATCGTAACCCTACCCTAACTACTCCACCCCACCAG
TATGATCGCAAATACACTTCCCCCTCATAGCCAGCAACACCCCACCTATG
CGATCGCTACTTTCACCTCCTTGCTCCCACCTCGTATAACCCCCTCAACC
GCCTTTATGGACCCCACACAAATCATTCACACTACACACAACAAGC
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