EY702984

Overview
NameEY702984
Unique NameEY702984
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10026 contig Csv1_Contig10026:1..851. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY702984 vs. ExPASy Swiss-Prot
Match: M3K2_ARATH (Mitogen-activated protein kinase kinase kinase 2 OS=Arabidopsis thaliana GN=ANP2 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.339e-11
Identity = 44/144 (30.56%), Postives = 67/144 (46.53%), Query Frame = 2 
Query:  434 SWPDDGKQQSHRLPLPPXXXXXXXXXXXXXXXXXXPSVPRSPGRMENPVSPESHWKQGKMLGRGTFGHVYVGFNSDSGEMCAMXESTLFDDAKVKESA----KQLMQEIVLLXRLXHPTSVHTM-DLKQ*GKLYIYLEYVSGGS 850
            S  DD  Q++H  P P                      P  P      + P   W++G+++GRG FG VY+G N DSGE+ A+ +  +  +   KE      ++L +E+ LL  L HP  V  +  +++   L I LE+V GGS
Sbjct:   16 STTDDENQENHPPPFPSLLADKITSCIRKSMVFAKSQSP--PNNSTVQIKPPIRWRKGQLIGRGAFGTVYMGMNLDSGELLAVKQVLITSNCASKEKTQAHIQELEEEVKLLKNLSHPNIVRYLGTVREDETLNILLEFVPGGS 157
The following BLAST results are available for this feature:
BLAST of EY702984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
M3K2_ARATH2.339e-1130.56Mitogen-activated protein kinase kinase kinase 2 O... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-014-E06-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702984 ID=EY702984; Name=EY702984; organism=Citrus sinensis; type=EST; length=851bp
AATCGTCTCTCCCCATCACCCAAACAAAGACGTTTAAGTGGTCATGTGCC
AAATCTACAGGTTCCGTATCATGGTGCTTTCAGCAGGACAGCTCGTTGTC
AAGTCCCTCCAGAAGTCCACTGAGAGCATTTGGATATTTGAGCAAGTCGT
GAATTCTGCTTTCTGGTCTGGGAAGCCTTATGCAGATGTCACATTACTTG
GCTCTGGCCACTGCTCTAGTCCAGGTTCTGGTCAAAATTCTGGGAATAAT
TCGATGGGAGGTGATATGTCAGGACAGTTATTTTGGCAACAGTTACAAAG
CAGGGGTAGCCCAGAATATTCACCAATACCTAGTCCCAGAATGACTAGCC
CAGGCCCCAGCTCCAGAATCCAAAGTGGTGCTGTCACCCCTATTCATCCT
AGAGCAGGAGGTGCACCCATTGAGTCGCAGACAAGCTGGCCTGATGATGG
AAAACAACAAAGCCACCGCTTGCCTCTTCCTCCTATAACAATATCCAATT
CTTCTCCCTTTTCTCATTCAAATTCGGCTGCAACATCACCCTCTGTGCCG
CGAAGTCCAGGAAGAATGGAAAATCCAGTTAGCCCCGAGTCACACTGGAA
ACAGGGAAAGATGCTGGGTAGAGGCACATTTGGACATGTTTATGTTGGTT
TTAACAGTGATAGTGGTGAAATGTGTGCAATGAANGAAAGTACATTATTT
GATGATGCCAAAGTCAAGGAGAGTGCTAAGCAGCTGATGCAGGAAATTGT
ATTATTANGTCGCTTACNGCATCCAACATCNGTGCATACTATGGATCTAA
AACAGTGAGGAAAACTTTATATATACCTGGAGTATGTATCTGGTGGGTCA
T
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