EY702978
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY702978 vs. ExPASy Swiss-Prot
Match: LBD4_ARATH (LOB domain-containing protein 4 OS=Arabidopsis thaliana GN=LBD4 PE=2 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 1.202e-47 Identity = 89/96 (92.71%), Postives = 94/96 (97.92%), Query Frame = 2 Query: 242 MKESGRKQGAPSPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQELPVHQRGDAVSSMVYEANARVRDPVYGCLGAIASLQ 529 MKES RKQGA SPCAACKLLRRRCAQDCVF+PYFPADEPQKFANVH+VFGASNVNKMLQELP+HQRGDAVSSMVYEANARVRDPVYGC+GAI+SLQ Sbjct: 1 MKESSRKQGAASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQ 96
BLAST of EY702978 vs. ExPASy Swiss-Prot
Match: LBD12_ARATH (LOB domain-containing protein 12 OS=Arabidopsis thaliana GN=LBD12 PE=2 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 7.306e-37 Identity = 70/85 (82.35%), Postives = 80/85 (94.12%), Query Frame = 2 Query: 275 SPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQELPVHQRGDAVSSMVYEANARVRDPVYGCLGAIASLQ 529 SPCA+CKLLRRRCA+DC+FAPYFP D+P KFA VHKVFGASNV+KMLQELPVHQR DAV+S+V+EANARVRDPVYGC+GAI+ LQ Sbjct: 7 SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVNSLVFEANARVRDPVYGCVGAISYLQ 91
BLAST of EY702978 vs. ExPASy Swiss-Prot
Match: LBD3_ARATH (LOB domain-containing protein 3 OS=Arabidopsis thaliana GN=LBD3 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 2.112e-34 Identity = 68/97 (70.10%), Postives = 79/97 (81.44%), Query Frame = 2 Query: 242 MKESGRKQGAP-SPCAACKLLRRRCAQD-CVFAPYFPADEPQKFANVHKVFGASNVNKMLQELPVHQRGDAVSSMVYEANARVRDPVYGCLGAIASL 526 M++ G + G SPCA CKLLRR+C +D CVFAPYFPA EP KFA VHK+FGASNVNKMLQEL + R DAV SMVYEANAR++DPVYGC+G I+SL Sbjct: 1 MRQKGHRHGRTVSPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELSENHRSDAVDSMVYEANARIQDPVYGCVGTISSL 97 HSP 2 Score: 26.1794 bits (56), Expect = 2.112e-34 Identity = 10/19 (52.63%), Postives = 16/19 (84.21%), Query Frame = 1 Query: 532 QIDVLQTQLARLKAEVVHL 588 Q++ LQTQLA +AE++H+ Sbjct: 100 QLETLQTQLAFAQAELIHI 118
BLAST of EY702978 vs. ExPASy Swiss-Prot
Match: LBD15_ARATH (LOB domain-containing protein 15 OS=Arabidopsis thaliana GN=LBD15 PE=2 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 5.418e-32 Identity = 62/85 (72.94%), Postives = 74/85 (87.06%), Query Frame = 2 Query: 275 SPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQELPVHQRGDAVSSMVYEANARVRDPVYGCLGAIASLQ 529 +PCAACKLLRRRCAQ+C F+PYF EP KFA+VHKVFGASNV+KML E+P QR DA +S+VYEAN R+RDPVYGC+GAI++LQ Sbjct: 44 TPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPVYGCMGAISALQ 128
BLAST of EY702978 vs. ExPASy Swiss-Prot
Match: LOB_ARATH (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana GN=LOB PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 9.242e-32 Identity = 62/85 (72.94%), Postives = 71/85 (83.53%), Query Frame = 2 Query: 275 SPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQELPVHQRGDAVSSMVYEANARVRDPVYGCLGAIASLQ 529 SPCAACK LRR+C C+FAPYFP +EP KFANVHK+FGASNV K+L EL HQR DAV+S+ YEA ARVRDPVYGC+GAI+ LQ Sbjct: 10 SPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQ 94
BLAST of EY702978 vs. ExPASy Swiss-Prot
Match: LBD25_ARATH (LOB domain-containing protein 25 OS=Arabidopsis thaliana GN=LBD25 PE=2 SV=3) HSP 1 Score: 137.117 bits (344), Expect = 1.207e-31 Identity = 60/85 (70.59%), Postives = 73/85 (85.88%), Query Frame = 2 Query: 275 SPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQELPVHQRGDAVSSMVYEANARVRDPVYGCLGAIASLQ 529 SPCAACK LRR+C DCVFAPYFP +EP KFANVH++FGASNV+K+L E+ HQR DAV+S+ YEA AR++DPVYGC+GAI+ LQ Sbjct: 38 SPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQREDAVNSLAYEAEARLKDPVYGCVGAISVLQ 122
BLAST of EY702978 vs. ExPASy Swiss-Prot
Match: LBD36_ARATH (LOB domain-containing protein 36 OS=Arabidopsis thaliana GN=LBD36 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.587e-31 Identity = 65/105 (61.90%), Postives = 78/105 (74.29%), Query Frame = 2 Query: 275 SPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQELPVHQRGDAVSSMVYEANARVRDPVYGCLGAIASLQIK*TCYRPNWPGSKPRWCTY 589 SPCAACK LRR+C Q+CVFAPYFP D+PQKFA VHKVFGASNV K+L EL +QR DAV+S+ YEA AR+RDPVYGC+G I+ LQ + + +K TY Sbjct: 6 SPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDAVNSLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELATY 110
BLAST of EY702978 vs. ExPASy Swiss-Prot
Match: LBD6_ARATH (LOB domain-containing protein 6 OS=Arabidopsis thaliana GN=LBD6 PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 7.824e-31 Identity = 61/85 (71.76%), Postives = 71/85 (83.53%), Query Frame = 2 Query: 275 SPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQELPVHQRGDAVSSMVYEANARVRDPVYGCLGAIASLQ 529 SPCAACK LRR+C +CVFAPYFP D+PQKFANVHKVFGASNV K+L EL QR DAV+S+ YEA+ R+RDPVYGC+G I+ LQ Sbjct: 8 SPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVNSLAYEADMRLRDPVYGCVGVISLLQ 92
BLAST of EY702978 vs. ExPASy Swiss-Prot
Match: LBD13_ARATH (LOB domain-containing protein 13 OS=Arabidopsis thaliana GN=LBD13 PE=2 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 1.743e-30 Identity = 60/85 (70.59%), Postives = 73/85 (85.88%), Query Frame = 2 Query: 275 SPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQELPVHQRGDAVSSMVYEANARVRDPVYGCLGAIASLQ 529 +PCAACKLLRRRCA++C F+PYF EP KFA VHKVFGASNV+KML E+ QRGDA +S+VYEAN R+RDP+YGC+GAI++LQ Sbjct: 51 TPCAACKLLRRRCAEECPFSPYFSPHEPHKFAAVHKVFGASNVSKMLLEVGESQRGDAANSLVYEANLRLRDPIYGCMGAISALQ 135
BLAST of EY702978 vs. ExPASy Swiss-Prot
Match: LBD6_MAIZE (LOB domain-containing protein 6 OS=Zea mays GN=LBD6 PE=1 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.883e-30 Identity = 60/88 (68.18%), Postives = 70/88 (79.55%), Query Frame = 2 Query: 266 GAPSPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQELPVHQRGDAVSSMVYEANARVRDPVYGCLGAIASLQ 529 G SPCAACK LRR+C DCVFAPYFP D PQKF +VH+VFGASNV K+L EL QR DAV+S+ YEA+ R+RDPVYGC+G I+ LQ Sbjct: 29 GTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPFQREDAVNSLAYEADMRLRDPVYGCVGVISILQ 116 The following BLAST results are available for this feature:
BLAST of EY702978 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >EY702978 ID=EY702978; Name=EY702978; organism=Citrus sinensis; type=EST; length=856bpback to top |