EY702974

Overview
NameEY702974
Unique NameEY702974
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length856
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6040 contig Csv1_Contig6040:2..858. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702974 vs. ExPASy Swiss-Prot
Match: NACA1_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana GN=At3g12390 PE=1 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 1.041e-59
Identity = 125/153 (81.70%), Postives = 131/153 (85.62%), Query Frame = 3
Query:  207 DGEAGGXXXXXXXXXXXXXAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVVSKPESS--AMAQDDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 659
            DGEAGG             AMLKLGMKPI GVSRVTVKKSKNILFVISKPDVFKSP +DTYVIFGEAKIEDLSSQ+Q+QAAEQFKAPDLS+V+SK ESS  A+ QDDEEVDE GVEPKDIELVMTQAGVSR  AVKALKAADGDIVSAIMELT
Sbjct:   50 DGEAGGKSKQSRSEKKSRKAMLKLGMKPITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEAKIEDLSSQIQSQAAEQFKAPDLSNVISKGESSSAAVVQDDEEVDEEGVEPKDIELVMTQAGVSRPNAVKALKAADGDIVSAIMELT 202          
BLAST of EY702974 vs. ExPASy Swiss-Prot
Match: NACA_PINTA (Nascent polypeptide-associated complex subunit alpha-like protein OS=Pinus taeda PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.273e-57
Identity = 116/133 (87.22%), Postives = 124/133 (93.23%), Query Frame = 3
Query:  264 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVVSKPESSAMAQDDE-EVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 659
            AMLKLGMKP+ GVSRVT+KKSKNILFVIS PDVFKSPT+DTY+ FGEAKIEDLSSQLQTQAAEQFKAP+LSHV  KPESS  AQ+DE EVD+TGVEPKDIELVMTQAGVSR KAVKALKAADGDIVSAIM+LT
Sbjct:   72 AMLKLGMKPVSGVSRVTIKKSKNILFVISNPDVFKSPTSDTYIAFGEAKIEDLSSQLQTQAAEQFKAPNLSHVTMKPESSTAAQEDEDEVDDTGVEPKDIELVMTQAGVSRTKAVKALKAADGDIVSAIMDLT 204          
BLAST of EY702974 vs. ExPASy Swiss-Prot
Match: NACA3_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 3 OS=Arabidopsis thaliana GN=At5g13850 PE=1 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 3.136e-56
Identity = 121/161 (75.16%), Postives = 132/161 (81.99%), Query Frame = 3
Query:  198 GHRDGEAGGXXXXXXXXXXXXXAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVVSKPESSAMA-------QDDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 659
            GH DGEAGG             AMLKLGMKPI GVSRVTVKKSKNILFVISKPDVFKSP +DTYVIFGEAKIEDLSSQLQ+QAAEQFKAP+LS+V+S+ E+S+ A        DDEEVDE GVEPKDIELVMTQAGVS+ +AVKALK A+GDIVSAIMELT
Sbjct:   44 GH-DGEAGGRSKQSRSEKKSRKAMLKLGMKPITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEAKIEDLSSQLQSQAAEQFKAPNLSNVISQGETSSAATAAAVQDDDDEEVDEEGVEPKDIELVMTQAGVSKPRAVKALKLANGDIVSAIMELT 203          
BLAST of EY702974 vs. ExPASy Swiss-Prot
Match: NACA2_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 2 OS=Arabidopsis thaliana GN=At3g49470 PE=2 SV=2)

HSP 1 Score: 190.66 bits (483), Expect = 9.145e-48
Identity = 97/138 (70.29%), Postives = 118/138 (85.51%), Query Frame = 3
Query:  264 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVVSKPESSA------MAQDDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 659
            AMLKLGMKP+ GVSRVT+K++KN+LF ISKPDVFKSP ++TYVIFGEAKIEDLSSQLQTQAA+QF+ P++     + E+S       + +D+EE+DETGVE +DI+LVMTQAGVSR+KAVKALK+ DGDIVSAIMELT
Sbjct:   79 AMLKLGMKPVTGVSRVTIKRTKNVLFFISKPDVFKSPHSETYVIFGEAKIEDLSSQLQTQAAQQFRMPEIGATSQRAEASTATVEAQVEEDEEEIDETGVEARDIDLVMTQAGVSRSKAVKALKSHDGDIVSAIMELT 216          
BLAST of EY702974 vs. ExPASy Swiss-Prot
Match: NACA4_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 4 OS=Arabidopsis thaliana GN=At4g10480 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 2.037e-47
Identity = 97/138 (70.29%), Postives = 117/138 (84.78%), Query Frame = 3
Query:  264 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVVSKPESSAMA------QDDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 659
            AMLKLGMKP+  VSRVT+K+SKN+LFVISKPDVFKSP ++TYVIFGEAKI+D+SSQLQ QAA++FK PD++ ++   + S  A      +DDE+VDETGVE KDI+LVMTQAGVSR KAVKALK ++GDIVSAIMELT
Sbjct:   74 AMLKLGMKPVTDVSRVTIKRSKNVLFVISKPDVFKSPNSETYVIFGEAKIDDMSSQLQAQAAQRFKMPDVASMIPNTDGSEAATVAQEEEDDEDVDETGVEAKDIDLVMTQAGVSRPKAVKALKESNGDIVSAIMELT 211          
BLAST of EY702974 vs. ExPASy Swiss-Prot
Match: NACA5_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 5 OS=Arabidopsis thaliana GN=At1g33040 PE=2 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 4.248e-45
Identity = 92/138 (66.67%), Postives = 116/138 (84.06%), Query Frame = 3
Query:  264 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVVSKPESSAM------AQDDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 659
            A+LKLGMKP+  VSRVT+K++KN+LFVISKPDV+KSP  +TYVIFGEAK++DLSSQLQTQAA++FK PD++ ++    S A        +D+++VD+TGVE +DI+LVMTQAGVS+AKAV ALKA DGDIVSAIMELT
Sbjct:   71 AVLKLGMKPVSDVSRVTIKRAKNVLFVISKPDVYKSPNAETYVIFGEAKVDDLSSQLQTQAAQRFKMPDVTSMLPNAGSEATMAPLAEEEDEDDVDDTGVEARDIDLVMTQAGVSKAKAVSALKANDGDIVSAIMELT 208          
BLAST of EY702974 vs. ExPASy Swiss-Prot
Match: NACA_ORENI (Nascent polypeptide-associated complex subunit alpha OS=Oreochromis niloticus GN=naca PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.564e-39
Identity = 86/136 (63.24%), Postives = 110/136 (80.88%), Query Frame = 3
Query:  264 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAP--DLSHVVSKPESSAMAQ--DDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 659
            AM KLG++ + GV+RVT++KSKNILFVI+KPDV+KSP +DTY++FGEAKIEDLS Q Q  AAE+FK P   +S+V    ++  + +  ++EEVDETGVE KDIELVM+QA VSRAKAV+ALK  + DIV+AIMELT
Sbjct:   79 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVPGETVSNVQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNNNDIVNAIMELT 214          
BLAST of EY702974 vs. ExPASy Swiss-Prot
Match: NACAD_MOUSE (NAC-alpha domain-containing protein 1 OS=Mus musculus GN=Nacad PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.941e-39
Identity = 84/141 (59.57%), Postives = 105/141 (74.47%), Query Frame = 3
Query:  264 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVV---------SKPESSAMAQDDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 659
            AM KLG++ I GV+R+T++KSKNILFVI+KPDVFKSP +DTYV+FGEAKIEDLS Q+   AAE+FK P     +          +PE     ++DEEV+E G+EP+DIELVM QA V+RAKAV+ALK    DIV+AIMELT
Sbjct: 1363 AMSKLGLRQIQGVTRITIQKSKNILFVIAKPDVFKSPASDTYVVFGEAKIEDLSQQVHKAAAEKFKVPSEPSALVPELSPGPRVRPECEEQEEEDEEVEEAGLEPRDIELVMAQANVTRAKAVRALKDNHSDIVNAIMELT 1503          
BLAST of EY702974 vs. ExPASy Swiss-Prot
Match: NACA_DROME (Nascent polypeptide-associated complex subunit alpha OS=Drosophila melanogaster GN=Nacalpha PE=1 SV=2)

HSP 1 Score: 159.844 bits (403), Expect = 1.729e-38
Identity = 81/136 (59.56%), Postives = 106/136 (77.94%), Query Frame = 3
Query:  267 MLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVVSKPESSAMA-----QDDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 659
            MLKLG+K I GV+RVT++KSKNILFVI+ PDV+K+P +DTY++FGEAKIEDLS Q Q  AAE+FKAP+ +       ++        +D+E+VD+TGV+ KDIELV+TQA  +RAKA+KALK  + DIV+AIMELT
Sbjct:   80 MLKLGLKQIQGVNRVTIRKSKNILFVINNPDVYKNPHSDTYIVFGEAKIEDLSQQAQVAAAEKFKAPEAAGAADSVGATTSVAPIAEEDEEDVDDTGVDEKDIELVITQANTTRAKAIKALKNNNNDIVNAIMELT 215          
BLAST of EY702974 vs. ExPASy Swiss-Prot
Match: NACA_DANRE (Nascent polypeptide-associated complex subunit alpha OS=Danio rerio GN=naca PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.729e-38
Identity = 84/136 (61.76%), Postives = 109/136 (80.15%), Query Frame = 3
Query:  264 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPD--LSHVVSKPESSAMAQ--DDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 659
            AM KLG++ + GV+RVT++KSKNILFVI+KPDV+KSP +DTY++FGEAKIEDLS Q Q  AAE+FK     +S++    ++  + +  ++EEVDETGVE KDIELVM+QA VSRAKAV+ALK  + DIV+AIMELT
Sbjct:   79 AMSKLGLRQVAGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNNNDIVNAIMELT 214          
The following BLAST results are available for this feature:
BLAST of EY702974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
NACA1_ARATH1.041e-5981.70Nascent polypeptide-associated complex subunit alp... [more]
NACA_PINTA1.273e-5787.22Nascent polypeptide-associated complex subunit alp... [more]
NACA3_ARATH3.136e-5675.16Nascent polypeptide-associated complex subunit alp... [more]
NACA2_ARATH9.145e-4870.29Nascent polypeptide-associated complex subunit alp... [more]
NACA4_ARATH2.037e-4770.29Nascent polypeptide-associated complex subunit alp... [more]
NACA5_ARATH4.248e-4566.67Nascent polypeptide-associated complex subunit alp... [more]
NACA_ORENI1.564e-3963.24Nascent polypeptide-associated complex subunit alp... [more]
NACAD_MOUSE5.941e-3959.57NAC-alpha domain-containing protein 1 OS=Mus muscu... [more]
NACA_DROME1.729e-3859.56Nascent polypeptide-associated complex subunit alp... [more]
NACA_DANRE1.729e-3861.76Nascent polypeptide-associated complex subunit alp... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-014-D07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702974 ID=EY702974; Name=EY702974; organism=Citrus sinensis; type=EST; length=856bp
CACGCGTCCGGTCTTGAGGAATTTGCCTCTGTTTATCCCCAAGAACAGCC
ATGACTGCTCAGACCCAAGAAGAGCTTCTCGCCTCTCTTCTCGAACAGCA
AAAAATCGATGATGATAAGCCTGTTGTAGAAGATGATGAAGATGAAGACG
AGGATGAGGATGAAGATGATGAGAAAGACGAAGATGAAGCTGACGAGGGA
CACCGAGATGGAGAGGCAGGTGGTAGGTCAAAACAGAGCAGAAGTGAAAA
GAAGAGTCGCAAAGCAATGTTAAAGCTTGGAATGAAACCTATCCCTGGTG
TTAGCCGGGTTACCGTCAAAAAGAGCAAGAATATCTTGTTTGTTATCTCA
AAACCGGATGTTTTCAAGAGCCCGACAACAGATACATATGTAATCTTTGG
TGAGGCAAAGATCGAGGACTTGAGCTCACAATTGCAGACTCAGGCAGCAG
AGCAATTTAAGGCTCCTGATCTCAGCCACGTGGTCTCCAAACCTGAGTCA
TCAGCCATGGCTCAGGACGATGAAGAAGTAGATGAGACCGGGGTTGAGCC
TAAGGACATAGAGTTAGTAATGACACAGGCAGGAGTCTCCAGGGCAAAGG
CTGTGAAAGCGCTGAAGGCTGCAGATGGGGACATAGTTTCAGCTATCATG
GAGCTTACCAACTGAGAGTTTTCTTAGATGTTTGTGGTGATTTAGTAAAC
CTTCTATAATTTTCCAGTCCATGTGTCCTTTAATCTCTCTTTTTTTTTCC
CCTGCCTTTTGNGATATTTCCTTTTCCTTTGTGGATATCAATTCACCGTG
GCTGCNATCTTTGATGATAAATGGAGTCTAGTTTTTTCCTGGAAAAAAAA
AAAAAA
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