EY702932

Overview
NameEY702932
Unique NameEY702932
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length882
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2446 contig Csv1_Contig2446:7..893. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY702932 vs. ExPASy Swiss-Prot
Match: Y5957_ARATH (Uncharacterized protein At5g39570 OS=Arabidopsis thaliana GN=At5g39570 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.105e-35
Identity = 91/189 (48.15%), Postives = 105/189 (55.56%), Query Frame = 3 
Query:  132 ITLTYGRPLPPSDETCYPSSSASDGDFDYARPKFSSHSEPSAYADEALNNEYSSYARPKXXXXXXXXXXXXXXXXXXXXXXXAYGIQPGMGRXXXXXXXXXXXXXXXXXAKRPDSQEYGSGYGKRPESE-EYGSGYGRKPDSEVYGSGYGRRPESG-ESGFGGRTESEYGGS-AYGRKPEYESGYGQKP 689
            IT+ YGRP+PPSDETCYP SS  D DF+Y RP+F+   EPSAY DEALN EYSSY+RPK                        YG + G GR                   R   Q YGSGYG R E+E EYGSG G + + E     YGRRPESG  SG+GGR+ESEY    +YGR  E E GY +KP
Sbjct:   28 ITVIYGRPIPPSDETCYPLSSGVDDDFEYERPEFTQIHEPSAYGDEALNTEYSSYSRPK-PRPAFRPDSGGGGHVQGERPNPGYGSESGYGRKPESEYGSGYGGQTEVEYGRRPEQSYGSGYGGRTETESEYGSGGGGRTEVE-----YGRRPESGLGSGYGGRSESEYERKPSYGRSEEQEEGY-RKP 209
The following BLAST results are available for this feature:
BLAST of EY702932 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y5957_ARATH1.105e-3548.15Uncharacterized protein At5g39570 OS=Arabidopsis t... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-013-H07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702932 ID=EY702932; Name=EY702932; organism=Citrus sinensis; type=EST; length=882bp
CCACGCGTCCGAATAAAACAAAACAAAATCGCGATCGGAACAGAGAAACA
ATGCCGTACTACGCTGACAATGACGATGACGTTACTGATTTCGACGATTA
CGATCCAACACCCTACGATGGTGGATACGACATCACTTTGACTTACGGCC
GTCCTCTGCCACCGTCCGATGAGACTTGTTACCCATCATCGTCGGCGTCA
GATGGGGACTTCGACTACGCTCGTCCCAAGTTCTCGTCGCACTCGGAGCC
TTCAGCCTACGCTGACGAAGCTCTCAATAACGAGTACAGCTCCTACGCCC
GACCAAAGCCTCGTCCCGGTTTCGTACCCGGGTCAGGGGGTGGGTCGGGT
TATGGAGGAAGGCCCCAGCCGCAGCCGGCGTATGGGATTCAGCCTGGAAT
GGGAAGGCCCGAACCTTATGGGTCGGGGAGGTCTGAATCTGAATATGGTT
CTGGGTATGCGAAGAGGCCTGATTCGCAGGAATATGGATCTGGGTACGGA
AAGAGACCCGAGTCGGAGGAATATGGATCTGGGTACGGCAGGAAACCTGA
TTCCGAGGTGTATGGCTCTGGATATGGGCGGAGACCCGAGTCGGGTGAAT
CCGGATTTGGTGGTAGGACTGAGTCCGAGTATGGAGGATCAGCGTATGGA
CGAAAACCCGAATATGAGTCCGGTTATGGCCAGAAACCGGATATGAATCT
GGGCTTGGTGGAAAACANGGTACGAGTCTGGATATGGAAGCAACCCCGAT
TTGAATCGGATATGTANGAAACCCGAGTACGAGTCTGGGTACGGCAGCAA
GCCGGAATTTGATCCCGCTATGGTANGAAACCGAGTATGAGTCCGGCTAC
CGGAGTAACATGATGATAGGTCCGCTATGGAG
back to top