EY702931

Overview
NameEY702931
Unique NameEY702931
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10573 contig Csv1_Contig10573:28..892. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702931 vs. ExPASy Swiss-Prot
Match: 21KD_DAUCA (21 kDa protein OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 3.006e-36
Identity = 83/193 (43.01%), Postives = 124/193 (64.25%), Query Frame = 3
Query:   54 KYFLILLAIFSYLNSSSASRHGPSKIAADRRFIKTSCSSTTYPTLCYKSLARHASLIQTSPKLLAHASLNVTLAMAKSTSAVMLKMSKSPGMKPREVDAMQDCLEELSDSVDELRKSIGEMGLI---KASNFELTMSDIQTWVSAALTDETTCSDGFEKNTVNGKV---VRAQIVKIAHMTSNALALINSYAS 614
            K  L+  A+   L ++SA        A   +FIKTSC+ TTYP +C +SL+ +A  IQ +P+ LA  +L V+L   +     M +++K  G+K R+  A+ DCLEE+ DS+D + +S  EM  +   K ++F   MS+++TWVSAALTDETTC DGF    ++GK+   VRAQ+V +A +TSNALAL+N++A+
Sbjct:    5 KSTLVFSALLVILAAASA--------APANQFIKTSCTLTTYPAVCEQSLSAYAKTIQNNPQELASTALQVSLTRTQQAQTFMKRLNKFKGLKARQYAAIHDCLEEVEDSLDRVSRSCDEMKNLSHAKGNDFTFRMSNVETWVSAALTDETTCMDGFAGKGMDGKIKESVRAQVVAVARVTSNALALVNNFAA 189          
BLAST of EY702931 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 2.732e-21
Identity = 63/190 (33.16%), Postives = 107/190 (56.32%), Query Frame = 3
Query:   63 LILLAIFSYLNSSSASRHGPSKI----AADRRFIKTSCSSTTYPTLCYKSLARHASLIQTSPKLLAHASLNVTLAMAKSTSAVMLKM-SKSPGMKPREVDAMQDCLEELSDSVDELRKSIGEMGLI-KASNFELTMSDIQTWVSAALTDETTCSDGFEKNTVNGKVVRAQI---VKIAHMTSNALALINS 605
            L+LLA    + +++ +++   KI    +     +K+ CSST YP LC+ ++A       TS K +  ASLN+T    K     + K+ +K  G+ PREV A+ DCLE + +++DEL  ++ ++    K  +      D++T +S+A+T++ TC DGF  +  + KV +A +   V + HM SNALA+I +
Sbjct:   29 LLLLASIVGIAATTTNQNKNQKITTLSSTSHAILKSVCSSTLYPELCFSAVAATGGKELTSQKEVIEASLNLTTKAVKHNYFAVKKLIAKRKGLTPREVTALHDCLETIDETLDELHVAVEDLHQYPKQKSLRKHADDLKTLISSAITNQGTCLDGFSYDDADRKVRKALLKGQVHVEHMCSNALAMIKN 218          
BLAST of EY702931 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 7.439e-19
Identity = 51/157 (32.48%), Postives = 91/157 (57.96%), Query Frame = 3
Query:  150 IKTSCSSTTYPTLCYKSLARHASLIQTSPKLLAHASLNVTLAMAKSTSAVMLKM-SKSPGMKPREVDAMQDCLEELSDSVDELRKSIGEMGLIKA-SNFELTMSDIQTWVSAALTDETTCSDGFEKNTVNGKVVRAQI---VKIAHMTSNALALINS 605
            +++SCSST YP LC  ++     +  TS K +  AS+N+T+   +     + K+  K  G+ PRE  A+ DCLE + +++DEL +++ ++ L            D++T +S+A+T++ TC DGF  +  + +V +A +   + + HM SNALA+I +
Sbjct:   59 LRSSCSSTRYPELCISAVVTAGGVELTSQKDVIEASVNLTITAVEHNYFTVKKLIKKRKGLTPREKTALHDCLETIDETLDELHETVEDLHLYPTKKTLREHAGDLKTLISSAITNQETCLDGFSHDDADKQVRKALLKGQIHVEHMCSNALAMIKN 215          
BLAST of EY702931 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.188e-16
Identity = 56/159 (35.22%), Postives = 88/159 (55.35%), Query Frame = 3
Query:  150 IKTSCSSTTYPTLCYKSLAR--HASLIQTSPKLLAHASLNVTLAMAKSTSAVMLKMSKSPGMKPREVDAMQDCLEELSDSVDELRKSIGEM-GLIKASNFELTMSDIQTWVSAALTDETTCSDGFEKNTVNGKVVRAQI----VKIAHMTSNALALINS 605
            +K+SCSST YP LC+ ++A    AS   TS K +   SLN+T    +     + K+ K   +  RE  A+ DCLE + +++DEL K++ ++       +      D++T +SAA+T++ TC DGF  +  N K VR  +    V +  M SNALA+I +
Sbjct:   69 LKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDAN-KHVRDALSDGQVHVEKMCSNALAMIKN 226          
BLAST of EY702931 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.188e-16
Identity = 56/159 (35.22%), Postives = 88/159 (55.35%), Query Frame = 3
Query:  150 IKTSCSSTTYPTLCYKSLAR--HASLIQTSPKLLAHASLNVTLAMAKSTSAVMLKMSKSPGMKPREVDAMQDCLEELSDSVDELRKSIGEM-GLIKASNFELTMSDIQTWVSAALTDETTCSDGFEKNTVNGKVVRAQI----VKIAHMTSNALALINS 605
            +K+SCSST YP LC+ ++A    AS   TS K +   SLN+T    +     + K+ K   +  RE  A+ DCLE + +++DEL K++ ++       +      D++T +SAA+T++ TC DGF  +  N K VR  +    V +  M SNALA+I +
Sbjct:   69 LKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDAN-KHVRDALSDGQVHVEKMCSNALAMIKN 226          
BLAST of EY702931 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.646e-16
Identity = 51/157 (32.48%), Postives = 92/157 (58.60%), Query Frame = 3
Query:  150 IKTSCSSTTYPTLCYKSLARHASLIQ--TSPKLLAHASLNVTL-AMAKSTSAVMLKMSKSPGMKPREVDAMQDCLEELSDSVDELRKSIGEMGLI-KASNFELTMSDIQTWVSAALTDETTCSDGFEKNTVNGKVVRAQIVKIAH---MTSNALALI 599
            +K++CS+T +P LCY ++   +   +  TS K +   SLN+T+ A+ ++  AV   +    G+ PRE  A+ DCLE + +++DEL  ++ ++ L     + +  + D++T +S+A+T++ TC DGF  +  + KV +  +    H   M SNALA+I
Sbjct:   66 VKSACSNTLHPELCYSAIVNVSDFSKKVTSQKDVIELSLNITVKAVRRNYYAVKELIKTRKGLTPREKVALHDCLETMDETLDELHTAVEDLELYPNKKSLKEHVEDLKTLISSAITNQETCLDGFSHDEADKKVRKVLLKGQKHVEKMCSNALAMI 222          
BLAST of EY702931 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.715e-15
Identity = 53/185 (28.65%), Postives = 89/185 (48.11%), Query Frame = 3
Query:   63 LILLAIFSYLNSSSASRHGPSKIAADRRFIKTSCSSTTYPTLCYKSLARHASLIQTSPKLLAHASLNVTL---AMAKSTSAVMLKMSKSPGMKPREVDAMQDCLEELSDSVDELRKSIGEMGLIKASNFELTMSDIQTWVSAALTDETTCSDGFEKNTVNGKVVRAQIV----KIAHMTSNALAL 596
            ++   IF+ + +  + +  P       + I  +CS + YP LC  +L      +      L H S N TL   + A  TS+ +        M PR   A   CLE L DSVD L +++  + ++       + SD+ TW+S+A+T+  TC+DGF++    G  V+ Q++     ++ M SN LA+
Sbjct:   46 VVCFGIFAGIRAVDSGKTEPKLTRKPTQAISRTCSKSLYPNLCIDTLLDFPGSLTADENELIHISFNATLQKFSKALYTSSTITYTQ----MPPRVRSAYDSCLELLDDSVDALTRALSSVVVVSGDE---SHSDVMTWLSSAMTNHDTCTDGFDEIEGQGGEVKDQVIGAVKDLSEMVSNCLAI 223          
BLAST of EY702931 vs. ExPASy Swiss-Prot
Match: PME21_ARATH (Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana GN=PME21 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.502e-11
Identity = 48/199 (24.12%), Postives = 94/199 (47.24%), Query Frame = 3
Query:   39 SNHMLKYFLILLAIFSYLNSSSASRHGPSKIAADRRFIKTSCSSTTYPTLCYKSLARHASLIQTSPKLLAHASLNVTLAM---AKSTSAVMLKMSKSPGMKPREVDAMQDCLEELSDSVDELRKSIGEMGLIKASNFELTMSDIQTWVSAALTDETTCSDGFEKNTVN-GKVVRAQIVKIAHMTSNALALINSYASLRG 623
            S+ +L   ++ + +   LN       G +++ A  + +K  C+ T Y   C  +L ++     T P  L   + NVT+     A   S  ++++ K      R   A+  C E +  ++DEL  S  E+G  +    +  + +++ W+SAA++ E TC +GF+    N G+ ++  +     +T N LA+I+  ++  G
Sbjct:   21 SSVLLISMVVAVTVGVSLNKHDGDSKGKAEVNASVKAVKDVCAPTDYRKTCEDTLIKNGKNT-TDPMELVKTAFNVTMKQITDAAKKSQTIMELQKDS----RTRMALDQCKELMDYALDELSNSFEELGKFEFHLLDEALINLRIWLSAAISHEETCLEGFQGTQGNAGETMKKALKTAIELTHNGLAIISEMSNFVG 214          
BLAST of EY702931 vs. ExPASy Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.962e-11
Identity = 56/190 (29.47%), Postives = 90/190 (47.37%), Query Frame = 3
Query:   63 LILLAIFSYLNSS-SASRHGPSKIAADRRFIKTSCSSTTYPTLCYKSLARH-ASLIQTSPKLLAHASLNVTL-----AMAKSTSAVMLKMSKSPGMKPREVDAMQDCLEELSDSVDELRKSIGEMGLIKASNFELTMSDIQTWVSAALTDETTCSDGFEKNTVNG--KVVRAQIVKIAHMTSNALALINS 605
            ++  AIF+ + S    ++  P       + I  +C  T +P LC  SL     SL  +S K L H ++N+TL     A+  S S   + M       PR   A   C+E L DSVD L +++  +    A        D+ TW+SAALT+  TC++GF+     G    + A +  ++ + SN LA+ ++
Sbjct:   57 ILAAAIFAGVRSRLKLNQSVPGLARKPSQAISKACELTRFPELCVDSLMDFPGSLAASSSKDLIHVTVNMTLHHFSHALYSSASLSFVDMP------PRARSAYDSCVELLDDSVDALSRALSSVVSSSAKP-----QDVTTWLSAALTNHDTCTEGFDGVDDGGVKDHMTAALQNLSELVSNCLAIFSA 235          
BLAST of EY702931 vs. ExPASy Swiss-Prot
Match: PME28_ARATH (Putative pectinesterase/pectinesterase inhibitor 28 OS=Arabidopsis thaliana GN=PME28 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.563e-11
Identity = 45/190 (23.68%), Postives = 87/190 (45.79%), Query Frame = 3
Query:   66 ILLAIFSYLNSSSASRHGPSKIAADRRFIKTSCSSTTYPTLCYKSLARHASLIQTSPKLLAHASLNVTLAMAKST---SAVMLKMSKSPGMKPREVDAMQDCLEELSDSVDELRKSIGEMGLIKASNFELTMSDIQTWVSAALTDETTCSDGFEKNTVN-GKVVRAQIVKIAHMTSNALALINSYASLRG 623
            +++A+   ++ + +   G  +I    + IK  C+ T Y   C  +L + A    + P  L   + N T+         S  M+++ K P  K     A+  C E +  ++ EL KS  E+G  +    +  +  ++ W+SA ++ E TC DGF+    N G+ ++  +     +T N LA++   ++  G
Sbjct:   29 MVVAVTIGVSVNKSDNAGDEEITTSVKAIKDVCAPTDYKETCEDTLRKDAK-DTSDPLELVKTAFNATMKQISDVAKKSQTMIELQKDPRAKM----ALDQCKELMDYAIGELSKSFEELGKFEFHKVDEALVKLRIWLSATISHEQTCLDGFQGTQGNAGETIKKALKTAVQLTHNGLAMVTEMSNYLG 213          
The following BLAST results are available for this feature:
BLAST of EY702931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
21KD_DAUCA3.006e-3643.0121 kDa protein OS=Daucus carota PE=2 SV=1[more]
PME2_ARATH2.732e-2133.16Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 P... [more]
PME3_ARATH7.439e-1932.48Pectinesterase/pectinesterase inhibitor 3 OS=Arabi... [more]
PME3_CITSI1.188e-1635.22Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1[more]
PME1_CITSI1.188e-1635.22Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE... [more]
PMEU1_SOLLC2.646e-1632.48Pectinesterase/pectinesterase inhibitor U1 OS=Sola... [more]
PME61_ARATH1.715e-1528.65Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME21_ARATH1.502e-1124.12Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME34_ARATH1.962e-1129.47Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME28_ARATH2.563e-1123.68Putative pectinesterase/pectinesterase inhibitor 2... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-013-H06-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702931 ID=EY702931; Name=EY702931; organism=Citrus sinensis; type=EST; length=899bp
CCACGCGTCCGCGGACGCGTGGGATGGAAGGTTCATCCTCAAATCATATG
CTTAAATACTTTCTCATTTTACTAGCCATTTTTTCCTACTTAAATTCAAG
CTCAGCCTCTAGACATGGCCCCTCTAAAATTGCTGCTGACAGAAGGTTCA
TCAAAACATCTTGCAGTTCAACAACTTATCCAACACTTTGCTATAAATCC
CTTGCTAGACATGCAAGCTTAATCCAAACAAGCCCTAAGCTCCTCGCCCA
TGCATCCCTCAACGTGACCCTTGCAATGGCTAAATCAACGTCAGCCGTCA
TGTTAAAGATGTCGAAAAGCCCTGGAATGAAGCCTAGAGAGGTGGATGCC
ATGCAAGATTGTTTGGAGGAGCTGAGTGATTCAGTTGATGAGCTCAGAAA
GTCCATTGGCGAAATGGGTCTGATCAAAGCTTCAAATTTTGAACTTACAA
TGAGTGATATACAGACTTGGGTTAGTGCTGCTTTGACTGATGAGACTACT
TGCAGCGATGGATTTGAGAAGAATACGGTGAATGGGAAAGTTGTGAGGGC
CCAGATTGTGAAGATTGCTCATATGACTAGCAATGCCTTGGCTTTGATCA
ATAGTTATGCTTCTCTTCGCGGTTAGATATTCTCATGATTAGCTCCATTA
TTGTAAGTGATTTATGCAGTATTAATCCTGCCTGTGGAGATCAGATTTAT
GAAAATGTAATCTTTATTGCAAGCAAATAGCAGATCCAGAAAAAAAAAGT
GGATTTATCTATTTTCCTTTTCTGTTAGGGATGTCGAAGAAGCGTTGGGA
AATGGCTTTGAAATGTAAATTGTACTATATAGTAATTAAATATAATTTGA
ACTTGGTAGCTAAAAAAAAAAAAAAGGGGGGCGCTCATAAGGATCAAGC
back to top