EY702924

Overview
NameEY702924
Unique NameEY702924
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY702924_ssr107 microsatellite EY702924_ssr107:107..116. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig3677 contig Csv1_Contig3677:1..858. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAOX_POPTR (NADP-dependent malic enzyme OS=Populus trichocarpa PE=2 SV=3)

HSP 1 Score: 229.565 bits (584), Expect = 1.925e-59
Identity = 111/153 (72.55%), Postives = 134/153 (87.58%), Query Frame = 1
Query:  436 ATLKEMRDGYAEV-VDPKSGVSGGVQDVYGEDTATEDQPVTPWSVSVASGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +TLKEMRDG + + +DPKS V GGV+DVYGED ATEDQ VTPW++SVASGY+LLRDPHHNKGLAF+EKER++HYLRGLLPPT ISQ+LQ KK+++ IRQYQ+PLQKY AMM+L+ERN++L   LLIDN E   P+VYTPT GEACQKYGSI++
Sbjct:    3 STLKEMRDGASVLDMDPKSTVGGGVEDVYGEDRATEDQLVTPWTISVASGYTLLRDPHHNKGLAFTEKERDAHYLRGLLPPTTISQQLQEKKLMNTIRQYQLPLQKYTAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFK 155          
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAOX_VITVI (NADP-dependent malic enzyme OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 3.073e-57
Identity = 109/153 (71.24%), Postives = 133/153 (86.93%), Query Frame = 1
Query:  436 ATLKEMRDGYAEV-VDPKSGVSGGVQDVYGEDTATEDQPVTPWSVSVASGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +TLK++RDG + + +DPK+ V GGV+D+YGED ATEDQ VTPW+VSVASGYSLLRDP HNKGLAF++KER++HYL GLLPP V +QELQ +K++++IRQYQVPLQKYMAMMDLQERN++L   LLIDN E   P+VYTPT GEACQKYGSI+R
Sbjct:    3 STLKDIRDGASVLDLDPKATVGGGVEDLYGEDFATEDQLVTPWTVSVASGYSLLRDPRHNKGLAFNDKERDAHYLCGLLPPVVSTQELQERKLMNSIRQYQVPLQKYMAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFR 155          
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAOC_FLATR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria trinervia GN=MOD1 PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 1.168e-56
Identity = 122/217 (56.22%), Postives = 147/217 (67.74%), Query Frame = 1
Query:  271 MFSLNRSAFLNNPASISGSFPDKHRRILPTRVVVAGSSNRDKSNGSLLMATDESTATLKEMRDGYAEVV---------DPKSGVSGGVQDVYGEDTATEDQPVTPWSVSVASGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYRS 894
            M SLN S+FL   +   GS        L  R  V  S      N + L   + S +    +RD  A V           P + V GGV+D+YGEDTATED  +TPWSVSVASGYSLLRDPHHNKGLAF+EKER++H+LRGLLPP V++ +LQVKKM+HNIRQYQVPLQ+Y AMMDLQ+RN++L   LLI+N E   PIVYTPT GEACQKYGSI+ +
Sbjct:    1 MISLN-SSFLERSSVTGGSRTQSQSLRLSARRPVVTSM----LNSNSLPERNVSVSVDSAVRDVNAPVAVEVDRSVGEKPFAAVGGGVEDMYGEDTATEDHYITPWSVSVASGYSLLRDPHHNKGLAFTEKERDAHFLRGLLPPVVVNHDLQVKKMMHNIRQYQVPLQRYQAMMDLQQRNERLFYKLLIENVEELLPIVYTPTVGEACQKYGSIFEN 212          
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAOC_FLAPR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria pringlei GN=MODA PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 1.168e-56
Identity = 118/214 (55.14%), Postives = 155/214 (72.43%), Query Frame = 1
Query:  271 MFSLNRSAFLNNPAS-ISGSFPDKHRRILPTRVVVAGSSNRDKSNGSLLMATDESTATLK-----EMRDGYAEVVDPKSGVSGGVQDVYGEDTATEDQPVTPWSVSVASGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYRS 894
            M SLN S+ + +  S +S +     R  +   +VVA  ++  +   S+ ++ D +   +      E+ D  +E   P + V GGV+DVYGED+ATED  +TPWSVSVASGYSLLRDPHHNKGLAF+EKER++HYLRGLLPP V++ +LQVKKM+HNIRQY+VPLQ+Y AMMDLQERN++L   LLI+N E   PIVYTPT GEACQKYG+I+++
Sbjct:    1 MMSLNSSSVVKSSISGVSWTQSQSVRLSVRRPMVVAMVNSNGRPERSVGVSVDGAVKDVNAPVAVEVAD--SESKKPTAVVGGGVEDVYGEDSATEDHFITPWSVSVASGYSLLRDPHHNKGLAFTEKERDAHYLRGLLPPVVVNHDLQVKKMMHNIRQYEVPLQRYQAMMDLQERNERLFYKLLIENIEELLPIVYTPTVGEACQKYGTIFKN 212          
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAOC_SOLLC (NADP-dependent malic enzyme, chloroplastic (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 7.832e-53
Identity = 99/136 (72.79%), Postives = 121/136 (88.97%), Query Frame = 1
Query:  484 KSGVSGGVQDVYGEDTATEDQPVTPWSVSVASGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +S V+GGVQDVYGED+ATEDQ +TPW++SVASG+SLLR+PH+NKGLAFSE+ER++HYLRGLLPP VIS +LQVKKM+++IR+Y VPLQ+YMAMMDLQE N++L   LLIDN E   PIVYTPT GEACQKYG I++
Sbjct:    4 ESTVTGGVQDVYGEDSATEDQSITPWTLSVASGFSLLRNPHYNKGLAFSERERDTHYLRGLLPPVVISHDLQVKKMMNSIRKYDVPLQRYMAMMDLQEMNERLFYKLLIDNVEELLPIVYTPTVGEACQKYGWIFK 139          
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAOX_MESCR (NADP-dependent malic enzyme OS=Mesembryanthemum crystallinum GN=MOD1 PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.630e-52
Identity = 98/141 (69.50%), Postives = 117/141 (82.98%), Query Frame = 1
Query:  469 EVVDPKSGVSGGVQDVYGEDTATEDQPVTPWSVSVASGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            E+ +   G++GGV DVYGE+ AT+DQ VTPWS SVA G+SLLRDP HNKGLAF+EKER++H+LRGLLPP V+SQELQ KK +  +RQYQVPLQKYMAMMDLQERN+KL   LL+D+ E   P+VYTPT GE CQKYGSI+R
Sbjct:    9 EMTNGSDGITGGVADVYGEEFATQDQLVTPWSFSVACGHSLLRDPQHNKGLAFTEKERDAHFLRGLLPPVVLSQELQEKKFLTTLRQYQVPLQKYMAMMDLQERNEKLFYKLLVDHVEELLPLVYTPTVGEGCQKYGSIFR 149          
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAOC_ORYSJ (NADP-dependent malic enzyme, chloroplastic OS=Oryza sativa subsp. japonica GN=ME6 PE=2 SV=2)

HSP 1 Score: 202.601 bits (514), Expect = 2.519e-51
Identity = 98/135 (72.59%), Postives = 114/135 (84.44%), Query Frame = 1
Query:  487 SGVSGGVQDVYGEDTATEDQPVTPWSVSVASGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +   GGV     ED ATE+ PVTPW+ SVASGY+LLRDPHHNKGLAFSEKER++HYLRGLLPP V+SQ+LQVKK++HN+RQY VPLQ+YMAMMDLQERN++L   LLIDN E   P+VYTPT GEACQKYGSI+R
Sbjct:   74 AAAGGGV-----EDMATEEVPVTPWAFSVASGYTLLRDPHHNKGLAFSEKERDAHYLRGLLPPAVVSQDLQVKKIMHNLRQYSVPLQRYMAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFR 203          
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAOX_PHAVU (NADP-dependent malic enzyme OS=Phaseolus vulgaris GN=ME1 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.806e-49
Identity = 97/154 (62.99%), Postives = 123/154 (79.87%), Query Frame = 1
Query:  430 STATLKEMRDGYAEVVDPKSGVSGGVQDVYGEDTATEDQPVTPWSVSVASGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            S+ +LKE     +   D  +G  GGV+D+YGED+ATED  +TPW+ SVASG SLLRDP +NKGLAF+E ER++HYLRGLLPP+V +QELQ K+++HN+RQY+VPL +YMA+MDLQERN++L   LLIDN     P+VYTPT GEACQKYGSI+R
Sbjct:    2 SSISLKENGGEVSVKKDYSNG--GGVRDLYGEDSATEDHLITPWTFSVASGCSLLRDPRYNKGLAFTEGERDAHYLRGLLPPSVFNQELQEKRLMHNLRQYEVPLHRYMALMDLQERNERLFYKLLIDNVAELLPVVYTPTVGEACQKYGSIFR 153          
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAOC_MAIZE (NADP-dependent malic enzyme, chloroplastic OS=Zea mays GN=MOD1 PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.253e-42
Identity = 81/119 (68.07%), Postives = 100/119 (84.03%), Query Frame = 1
Query:  532 ATEDQPVTPWSVSVASGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIY 888
            A+E+ PV PW+ SVASGY+LLRDPHHNKGLAF+E+ER+ HYLRGLLPP V+SQELQ+KK ++ +RQYQ PLQ+Y+AMM+LQE +++L   LLIDN     P VYTPT GEACQKYGSI+
Sbjct:   81 ASEELPVMPWATSVASGYTLLRDPHHNKGLAFTEEERDGHYLRGLLPPAVLSQELQIKKFMNTLRQYQTPLQRYIAMMNLQETDERLFYKLLIDNVVELLPFVYTPTVGEACQKYGSIF 199          
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAOX_MOUSE (NADP-dependent malic enzyme OS=Mus musculus GN=Me1 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.593e-21
Identity = 51/104 (49.04%), Postives = 69/104 (66.35%), Query Frame = 1
Query:  580 GYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            GY L RDPH NK LAF+ +ER    + GLLPP +ISQELQV +++ N  +      +Y+ +MDLQ+RN+KL   +L+ + E   PIVYTPT G ACQ+Y   +R
Sbjct:   15 GYLLTRDPHLNKDLAFTLEERQQLNIHGLLPPCIISQELQVLRIIKNFERLNSDFDRYLLLMDLQDRNEKLFYSVLMSDVEKFMPIVYTPTVGLACQQYSLAFR 118          
The following BLAST results are available for this feature:
BLAST of EY702924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
MAOX_POPTR1.925e-5972.55NADP-dependent malic enzyme OS=Populus trichocarpa... [more]
MAOX_VITVI3.073e-5771.24NADP-dependent malic enzyme OS=Vitis vinifera PE=2... [more]
MAOC_FLATR1.168e-5656.22NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOC_FLAPR1.168e-5655.14NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOC_SOLLC7.832e-5372.79NADP-dependent malic enzyme, chloroplastic (Fragme... [more]
MAOX_MESCR6.630e-5269.50NADP-dependent malic enzyme OS=Mesembryanthemum cr... [more]
MAOC_ORYSJ2.519e-5172.59NADP-dependent malic enzyme, chloroplastic OS=Oryz... [more]
MAOX_PHAVU1.806e-4962.99NADP-dependent malic enzyme OS=Phaseolus vulgaris ... [more]
MAOC_MAIZE1.253e-4268.07NADP-dependent malic enzyme, chloroplastic OS=Zea ... [more]
MAOX_MOUSE1.593e-2149.04NADP-dependent malic enzyme OS=Mus musculus GN=Me1... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-013-G10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702924 ID=EY702924; Name=EY702924; organism=Citrus sinensis; type=EST; length=894bp
CCACGCGTCCGTTTCTTCTGATCTCTTCTTTCTCTTTCTCCGATTTTCTC
TCCGTGTGCTGAAGAAACCAAACAGAAGAGAGAGAAAAAGGGAAAGAGGG
AAGAAGGAGAGAGAGAGCAAAGCTTTAAGACTTCAAAGCCAAAGCTCTGA
TAAGAAGACCCGAAAGACTCTCCCTTCTCTTCTCATTGCCTCTGCAACTT
TTTTTCTATTTTTACTTCGTCACACATTTTTAATCAGCGCAAGACTCTCT
CTTCACACATTTCTCTCGCCATGTTTTCGTTAAACAGAAGCGCTTTTCTG
AATAATCCTGCGAGCATATCAGGCTCGTTCCCTGATAAGCATAGAAGAAT
ACTGCCTACAAGAGTGGTGGTTGCGGGCTCGTCTAACAGAGATAAGAGTA
ACGGCAGTCTTTTAATGGCAACCGATGAAAGCACAGCTACATTAAAAGAA
ATGAGAGATGGCTATGCCGAAGTTGTGGACCCCAAGTCCGGCGTCAGCGG
TGGGGTCCAGGACGTTTATGGTGAGGATACCGCCACCGAAGACCAGCCTG
TCACCCCTTGGTCTGTCTCAGTTGCTAGTGGGTATTCTTTGTTGAGAGAT
CCACACCACAACAAAGGGCTTGCCTTCTCTGAAAAAGAAAGGAATTCACA
TTACTTGCGTGGTCTTCTCCCCCCTACAGTTATATCCCAAGAGCTCCAGG
TGAAGAAAATGGTGCATAATATTCGGCAGTACCAAGTTCCACTCCAGAAG
TACATGGCCATGATGGATCTTCAGGAGAGAAATCAGAAACTGGNTCTATA
GCTTCTCATTGACAATGGTGAGGGAGGTACTCCCATTGTCTATACTCCAA
CTGGGGGAGAAGCTTGCCAGAAGTACGGGAGCATCTATAGGTCG
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