EY702890

Overview
NameEY702890
Unique NameEY702890
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length856
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702890 vs. ExPASy Swiss-Prot
Match: NCKP1_ARATH (Protein NAP1 OS=Arabidopsis thaliana GN=NAP1 PE=1 SV=2)

HSP 1 Score: 298.13 bits (762), Expect = 4.067e-80
Identity = 165/263 (62.74%), Postives = 198/263 (75.29%), Query Frame = 3
Query:    3 GFYVETGGFNNNIHCLARCISAVIAGREYVKLQREHQQR-QSFSNSR-DSETLDSEIQSRVSAEASIKSAMQVFVKFAAGVVLDSWNEATRSHLVAKLIFLDQLSEISPFLPRTSLEPYVPYAILRSIYSQYYSNSPSIPFALLSASPHHSPAISLTHASP------VSRQPRGDSTPQNSAYDSGYFRGSSS--LSQEHLYETESGNLKSDNKHRN------VRRSGPLDYSSSRKVKYVEGSTSGNTGPNPLPRFAGSRAG 743
            GF +ETGGF+NNIHCLARCISAVIAG EYV+LQRE+QQ+ QS SN    SE LDSE   RV+AEASIKS+M +FVKFAA +VLDSW+EA RSHLVAKLIFLDQL EISP+LPR+SLE +VPY ILRSIY+QYYSN+PS P  L +ASP+HSP++SL HASP        ++  G  +   +A DSGYF+GSSS    QEH  E+E+GN +++  + N       RRSGPLDYSSS K     GS S +TGP+PLPRFA SR+G
Sbjct: 1161 GFNIETGGFSNNIHCLARCISAVIAGSEYVRLQREYQQQHQSLSNGHHSSENLDSEFPPRVTAEASIKSSMLLFVKFAASIVLDSWSEANRSHLVAKLIFLDQLCEISPYLPRSSLESHVPYTILRSIYTQYYSNTPSTP--LSTASPYHSPSVSLIHASPSMKNSTTPQRGSGSGSSSTAAPDSGYFKGSSSSLYGQEHYTESETGNSRNNENNNNNKQRGSSRRSGPLDYSSSHK----GGSGSNSTGPSPLPRFAVSRSG 1417          
BLAST of EY702890 vs. ExPASy Swiss-Prot
Match: NCKP1_ORYSJ (Probable protein NAP1 OS=Oryza sativa subsp. japonica GN=NAP1 PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 2.395e-64
Identity = 129/246 (52.44%), Postives = 172/246 (69.92%), Query Frame = 3
Query:   12 VETGGFNNNIHCLARCISAVIAGREYVKLQREHQQRQSFSNSRDSETLDSEIQSRVSAEASIKSAMQVFVKFAAGVVLDSWNEATRSHLVAKLIFLDQLSEISPFLPRTSLEPYVPYAILRSIYSQYYSNSPSIPFALLSASPHHSPAISLTHASPVSRQPRGDSTPQNSAYDSGYFRGSSSLSQEHLYETESGNLKSDNKHRNVRRSGPLDYSSSRKVKYVEGSTSGN--TGPNPLPRFAGSRAG 743
            V TGGF+NN+HCLARC+SAV+ G EY +++REH+ R S SN    E  + E+ SRVSAEA+IKSAMQ++VK +AG+VLDSWN+ +R ++V KLIFLDQL E+SP+LPR++LE ++PY ILRSIY Q Y  S  +    +  SP  SP ISL HASP  +Q R D+TP++  ++ GY   S S   E     E      + + R++RRSGPLDY+ +RKVK+VEGS+SG+   G   L RFA SR+G
Sbjct: 1114 VNTGGFSNNLHCLARCVSAVVGGSEYTRMEREHR-RSSLSNGHMDELQEPELLSRVSAEANIKSAMQLYVKLSAGLVLDSWNDTSRPYIVPKLIFLDQLCEMSPYLPRSTLEVHIPYTILRSIYHQLYGAS-LMATEPMEPSPRQSPLISLAHASPSMKQNRADTTPRSHTFEPGYHSSSGSQYDEGY---EGDRRTGERQLRSMRRSGPLDYTGTRKVKFVEGSSSGSHGAGSGSLQRFAVSRSG 1354          
The following BLAST results are available for this feature:
BLAST of EY702890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
NCKP1_ARATH4.067e-8062.74Protein NAP1 OS=Arabidopsis thaliana GN=NAP1 PE=1 ... [more]
NCKP1_ORYSJ2.395e-6452.44Probable protein NAP1 OS=Oryza sativa subsp. japon... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-013-D11-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702890 ID=EY702890; Name=EY702890; organism=Citrus sinensis; type=EST; length=856bp
CTGGCTTCTATGTTGAGACTGGGGGCTTCAACAACAATATCCATTGCTTG
GCAAGATGCATTAGTGCTGTAATTGCAGGACGTGAATATGTTAAATTGCA
ACGTGAACATCAACAGAGGCAGTCTTTTTCAAATAGCCGTGACAGTGAGA
CTTTGGATTCTGAAATACAAAGCCGTGTTTCTGCAGAAGCCAGCATTAAA
TCTGCAATGCAGGTCTTTGTCAAATTTGCTGCTGGAGTAGTTCTAGATTC
GTGGAATGAAGCTACAAGATCTCATCTTGTCGCCAAGCTTATTTTTCTGG
ACCAACTCTCTGAGATATCACCATTCCTTCCAAGAACTTCTCTTGAACCC
TATGTTCCCTATGCCATTCTCCGTTCAATATACAGTCAATACTATTCAAA
TTCCCCGTCAATCCCATTTGCATTATTAAGTGCATCGCCCCACCATTCAC
CTGCCATATCATTAACACATGCATCTCCCGTATCGAGACAGCCCCGTGGA
GATTCAACTCCTCAGAATAGTGCCTACGATTCGGGTTACTTTAGAGGATC
ATCATCCCTTAGTCAGGAACACCTCTATGAAACTGAGAGTGGAAATCTGA
AAAGTGATAATAAACATAGGAATGTTCGCCGTTCTGGGCCACTGGATTAC
AGTTCAAGCCGGAAAGTTAAGTACGTCGAAGGTTCGACGTCAGGGAACAC
GGGTCCCAACCCACTGCCTAGGTTTGCAGGGTCAAGGGCTGGCCTATTTC
ATACAGTAGAACAATGCTGGCTGGGCATCCAATTTTGGCTAATGGATTTA
AAGGGTACTTCCCACCTCCCTTTGTACAACTACAATCCTGAAGTAATGTC
AATATT
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