EY649562

Overview
NameEY649562
Unique NameEY649562
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length930
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649562 vs. ExPASy Swiss-Prot
Match: GSR2_ARATH (Uncharacterized protein At2g40430 OS=Arabidopsis thaliana GN=At2g40430 PE=1 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 6.343e-29
Identity = 61/106 (57.55%), Postives = 84/106 (79.25%), Query Frame = 2
Query:   47 SGMVDIWANEGEGD---NPKKVPK-PSVIPAVEVEASGCSYNPTFESHQESLAQAVAEEMQKVYRKELGPEPVPITVPGEVINDEDRYFLEVDN---GSDDENVEN 343
            S M D+W ++ +G+   NP+K+ K PS+I AVE+E  GCSYNPT ESHQ+ LA+AVA+EMQKVY+ ELGP PVP+T+ G+ +++++RYFL+VDN   G D+ENVEN
Sbjct:  119 SVMADLWGDDSKGEHESNPRKIFKNPSIISAVEIEHPGCSYNPTTESHQDMLAEAVAQEMQKVYKTELGPAPVPLTIEGDTLSEDERYFLDVDNFSEGEDNENVEN 224          

HSP 2 Score: 82.4185 bits (202), Expect = 3.745e-19
Identity = 51/126 (40.48%), Postives = 67/126 (53.17%), Query Frame = 1
Query:  475 SRKTKKVTRVELNKRERHKELHRKDAEANKREELSKQIDSLPNXXXXXXXXXXXXQKRHIXRVVAMQERLKVRPHAWESTNLSRXXXXXXXXXXXWVS-P*LKGCCTLVKIGLKSKEK-GLIVPSR 846
            SRKTK+VTRVELNKR R K L +K+ +   +E++  +IDSLPN            Q +H+ RV+A QE LK+RP                       S   LK CCTL +   KS EK G++VPS+
Sbjct:  312 SRKTKRVTRVELNKRCRQKALRKKETKEKAKEKILNEIDSLPNILEEIAKEDEDKQNKHLRRVIAKQEVLKIRPPRLGKYKFEAPPVQVLLTEEMTGSLRKLKACCTLARDRFKSLEKRGILVPSK 437          

HSP 3 Score: 31.5722 bits (70), Expect = 3.745e-19
Identity = 16/58 (27.59%), Postives = 33/58 (56.90%), Query Frame = 2
Query:  200 VAEEMQKVYRKELGPEPVPITVPGEVINDEDRYFLEVDN-GSDDENVENLSENQDTGN 370
            + ++  +  +K +G + V + + G+ I ++ +YFLEV N G  ++N +   E  + GN
Sbjct:  252 IEDKTPRQAQKSVGDDSVMVDLLGDDIKEDLKYFLEVGNVGEGEDNKDVKIEVSEAGN 309          
The following BLAST results are available for this feature:
BLAST of EY649562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
GSR2_ARATH6.343e-2957.55Uncharacterized protein At2g40430 OS=Arabidopsis t... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-100-001-A05-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649562 ID=EY649562; Name=EY649562; organism=Citrus sinensis; type=EST; length=930bp
CCCACGCGTCCGCTCGGGATGGTCAGAAGATGATGGTGCATCTGCTTCTG
GCATGGTTGACATATGGGCAAACGAAGGTGAAGGAGACAACCCGAAAAAG
GTCCCAAAACCTTCAGTTATTCCAGCTGTGGAAGTTGAGGCTTCAGGATG
CTCATACAATCCCACGTTCGAAAGTCATCAGGAGTCATTGGCTCAAGCTG
TGGCAGAAGAGATGCAGAAAGTCTATCGAAAGGAGTTGGGTCCTGAACCA
GTTCCAATTACCGTTCCAGGAGAAGTTATTAACGATGAAGATAGGTACTT
TCTTGAGGTGGATAATGGAAGCGATGATGAAAATGTGGAGAATTTGAGCG
AAAATCAAGATACTGGAAATGAAAACAGGGAAGCTTCTTAGATTTGTTAT
GGCTGTCACAATAATTATTCTTTTTCTATCTATAAATAATGAGAAATCCT
TCTGTTTCAATATCATGATGCAGATCTAGAAAAACAAAGAAGGTCACCCG
GGTTGAATTGAATAAGAGAGAAAGACACAAGGAACTGCATAGAAAAGATG
CAGAAGCCAATAAGAGGGAGGAGCTTTCTAAACAAATTGATAGCTTGCCG
AATATTATTGAAGAAATAACGAAAGATGATGAGGAGGAGCAAAAAAGACA
TATANGGCGTGTTGTGGCTATGCAAGAAAGACTAAAAGTTCGTCCCCACG
CTTGGGAAAGCACAAATTTGAGCCGGCTTCTACACAAGTNCCTCTATCTG
AAGAAATACTGGGTCTCTCCGTAGCTCAAGGGTTGTTGCACCCTTGTAAA
GATCGGTTTAAAATCTAAAGAAAAAGGATTGATTGTCCCATCAAGGGCAA
CCGGAATAGAAGCTGGTCTCCCTGCAAGATCTCTAACGGGGTAACTTTGA
TGGGGGAAGGCAAGTTTTCTTACCAAAGGT
back to top