EG358345

Overview
NameEG358345
Unique NameEG358345
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length472
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EG358345_ssr229 microsatellite EG358345_ssr229:229..240. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EG358345 vs. ExPASy Swiss-Prot
Match: LDOX_MALDO (Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 9.153e-23
Identity = 49/71 (69.01%), Postives = 57/71 (80.28%), Query Frame = 1
Query:    4 GRYKSILHRGLVNKEKVRISWAVFCEXXXXXXXXXXXXETVSEQKPAMFPPRTFQQHIEHKLFRRTQDALL 216
            G+YKSILHRG+VNKEKVRISWAVFCE            ETVSE +PAMFPPRTF +HI+HKLFR++Q+ALL
Sbjct:  285 GKYKSILHRGMVNKEKVRISWAVFCEPPKEKIILKPLPETVSEDEPAMFPPRTFAEHIQHKLFRKSQEALL 355          
BLAST of EG358345 vs. ExPASy Swiss-Prot
Match: LDOX_ARATH (Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.909e-20
Identity = 47/74 (63.51%), Postives = 54/74 (72.97%), Query Frame = 1
Query:    4 GRYKSILHRGLVNKEKVRISWAVFCEXXXXXXXXXXXXETVSEQKPAMFPPRTFQQHIEHKLFRRTQDALLSDE 225
            G+YKSILHRGLVNKEKVRISWAVFCE            E VS + PA FPPRTF QHIEHKLF + Q+ L+S++
Sbjct:  281 GKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQEELVSEK 354          
BLAST of EG358345 vs. ExPASy Swiss-Prot
Match: LDOX_PERFR (Leucoanthocyanidin dioxygenase OS=Perilla frutescens GN=ANS PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 7.252e-20
Identity = 46/70 (65.71%), Postives = 51/70 (72.86%), Query Frame = 1
Query:    4 GRYKSILHRGLVNKEKVRISWAVFCEXXXXXXXXXXXXETVSEQKPAMFPPRTFQQHIEHKLFRRTQDAL 213
            G+YKSILHRGLVNKEKVRISWAVFCE            ETVSE +P  FPPRTF QH++HKLFR+T   L
Sbjct:  287 GKYKSILHRGLVNKEKVRISWAVFCEPPKEKIVLQPLPETVSEVEPPRFPPRTFAQHLKHKLFRKTDGDL 356          
BLAST of EG358345 vs. ExPASy Swiss-Prot
Match: LDOX_PETHY (Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.158e-17
Identity = 40/65 (61.54%), Postives = 47/65 (72.31%), Query Frame = 1
Query:    4 GRYKSILHRGLVNKEKVRISWAVFCEXXXXXXXXXXXXETVSEQKPAMFPPRTFQQHIEHKLFRR 198
            G+YKSILHRG+VNKEKVR SWA+FCE            ETV+E +P  FPPRTF QH+ HKLFR+
Sbjct:  285 GKYKSILHRGVVNKEKVRFSWAIFCEPPKEKIILKPLPETVTEAEPPRFPPRTFAQHMAHKLFRK 349          
BLAST of EG358345 vs. ExPASy Swiss-Prot
Match: LDOX_MAIZE (Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.849e-15
Identity = 39/75 (52.00%), Postives = 47/75 (62.67%), Query Frame = 1
Query:    4 GRYKSILHRGLVNKEKVRISWAVFCEXXXXXXXXXXXXETVSEQKPAMFPPRTFQQHIEHKLFRRTQDALLSDEE 228
            GRY S+LHRGLVN+E VRISW VFCE            E V+E  PA F PRTF+QH++ KLF++ Q      EE
Sbjct:  303 GRYTSVLHRGLVNREAVRISWVVFCEPPPDSVLLHPLPELVTEGHPARFTPRTFKQHLDRKLFKKKQQHKAKAEE 377          
The following BLAST results are available for this feature:
BLAST of EG358345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
LDOX_MALDO9.153e-2369.01Leucoanthocyanidin dioxygenase OS=Malus domestica ... [more]
LDOX_ARATH1.909e-2063.51Leucoanthocyanidin dioxygenase OS=Arabidopsis thal... [more]
LDOX_PERFR7.252e-2065.71Leucoanthocyanidin dioxygenase OS=Perilla frutesce... [more]
LDOX_PETHY1.158e-1761.54Leucoanthocyanidin dioxygenase OS=Petunia hybrida ... [more]
LDOX_MAIZE1.849e-1552.00Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 P... [more]
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Properties
Property NameValue
Genbank description10g5 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0010g5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358345 ID=EG358345; Name=EG358345; organism=Citrus sinensis; type=EST; length=472bp
CCGGGCAGGTACAAGAGTATTCTTCACAGGGGACTTGTTAACAAGGAAAA
GGTTAGGATCTCATGGGCTGTTTTCTGTGAGCCACCGAAGGACAAGATTA
TCCTCAAGCCTCTCCCGGAAACTGTCTCTGAGCAAAAGCCGGCAATGTTC
CCTCCTCGCACCTTTCAACAGCACATTGAGCACAAGCTGTTTAGGAGGAC
GCAAGATGCTCTCCTCTCCGATGAAGAATAATTAATTAATCGGATTTCTT
ATTATGTTTAATCTTCCGGTGAATGCTTTCACTACAGTACGCGGGTGATG
TAAACATTTTGTGAGGAGGCTGTTGTTGTGTGTTGTCCTTTTTGTTCTTT
TGTTTTAGCTTATACATAAATAAGAGCAAATTATAAAGACTTTATCTAAA
GTTCTGGTATAATACCGGTTTTATTTGCATATGATGAATGCAATGCAAAA
GTTCTGGATGTTTCTCTCTCTG
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