EG358335

Overview
NameEG358335
Unique NameEG358335
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length497
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EG358335_ssr49 microsatellite EG358335_ssr49:49..60. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig6865 contig Csv1_Contig6865:1..500. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EG358335 vs. ExPASy Swiss-Prot
Match: LDOX_MALDO (Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 8.797e-22
Identity = 49/69 (71.01%), Postives = 56/69 (81.16%), Query Frame = -3
Query:   73 YKSILHRGLVNKEKVRISWAVFCEXXXXXXXXXXXPETVSEQKPAMFPPRTFQQHIEHKLFRRTQDALL 279
            YKSILHRG+VNKEKVRISWAVFCE           PETVSE +PAMFPPRTF +HI+HKLFR++Q+ALL
Sbjct:  287 YKSILHRGMVNKEKVRISWAVFCEPPKEKIILKPLPETVSEDEPAMFPPRTFAEHIQHKLFRKSQEALL 355          
BLAST of EG358335 vs. ExPASy Swiss-Prot
Match: LDOX_ARATH (Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.834e-19
Identity = 47/72 (65.28%), Postives = 53/72 (73.61%), Query Frame = -3
Query:   64 YKSILHRGLVNKEKVRISWAVFCEXXXXXXXXXXXPETVSEQKPAMFPPRTFQQHIEHKLFRRTQDALLSDE 279
            YKSILHRGLVNKEKVRISWAVFCE           PE VS + PA FPPRTF QHIEHKLF + Q+ L+S++
Sbjct:  283 YKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQEELVSEK 354          
BLAST of EG358335 vs. ExPASy Swiss-Prot
Match: LDOX_PERFR (Leucoanthocyanidin dioxygenase OS=Perilla frutescens GN=ANS PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 6.971e-19
Identity = 46/68 (67.65%), Postives = 50/68 (73.53%), Query Frame = -3
Query:   76 YKSILHRGLVNKEKVRISWAVFCEXXXXXXXXXXXPETVSEQKPAMFPPRTFQQHIEHKLFRRTQDAL 279
            YKSILHRGLVNKEKVRISWAVFCE           PETVSE +P  FPPRTF QH++HKLFR+T   L
Sbjct:  289 YKSILHRGLVNKEKVRISWAVFCEPPKEKIVLQPLPETVSEVEPPRFPPRTFAQHLKHKLFRKTDGDL 356          
BLAST of EG358335 vs. ExPASy Swiss-Prot
Match: LDOX_PETHY (Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.113e-16
Identity = 40/63 (63.49%), Postives = 46/63 (73.02%), Query Frame = -3
Query:   91 YKSILHRGLVNKEKVRISWAVFCEXXXXXXXXXXXPETVSEQKPAMFPPRTFQQHIEHKLFRR 279
            YKSILHRG+VNKEKVR SWA+FCE           PETV+E +P  FPPRTF QH+ HKLFR+
Sbjct:  287 YKSILHRGVVNKEKVRFSWAIFCEPPKEKIILKPLPETVTEAEPPRFPPRTFAQHMAHKLFRK 349          
BLAST of EG358335 vs. ExPASy Swiss-Prot
Match: LDOX_MAIZE (Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 3.958e-14
Identity = 38/73 (52.05%), Postives = 46/73 (63.01%), Query Frame = -3
Query:   61 YKSILHRGLVNKEKVRISWAVFCEXXXXXXXXXXXPETVSEQKPAMFPPRTFQQHIEHKLFRRTQDALLSDEE 279
            Y S+LHRGLVN+E VRISW VFCE           PE V+E  PA F PRTF+QH++ KLF++ Q      EE
Sbjct:  305 YTSVLHRGLVNREAVRISWVVFCEPPPDSVLLHPLPELVTEGHPARFTPRTFKQHLDRKLFKKKQQHKAKAEE 377          
The following BLAST results are available for this feature:
BLAST of EG358335 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
LDOX_MALDO8.797e-2271.01Leucoanthocyanidin dioxygenase OS=Malus domestica ... [more]
LDOX_ARATH1.834e-1965.28Leucoanthocyanidin dioxygenase OS=Arabidopsis thal... [more]
LDOX_PERFR6.971e-1967.65Leucoanthocyanidin dioxygenase OS=Perilla frutesce... [more]
LDOX_PETHY1.113e-1663.49Leucoanthocyanidin dioxygenase OS=Petunia hybrida ... [more]
LDOX_MAIZE3.958e-1452.05Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 P... [more]
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Properties
Property NameValue
Genbank description13d6 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0013d6, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358335 ID=EG358335; Name=EG358335; organism=Citrus sinensis; type=EST; length=497bp
ACTGTAGTGAAAGCATTCACCGGAAGATTAAACATAATAAGAAATCCGAT
TAATTAATTATTCTTCATCGGAGAGGAGAGCATCCTGCGTCCTCCTAAAC
AGCTTGTGCTCAATGTGCTGTTGAAAGGTGCGAGGAGGGAACATTGCCGG
CTTTTGCTCAGAGACAGTTTCCGGGAGAGGCTTGAGGATAATCTTGTCCT
TCGGTGGCTCACAGAAAACAGCCCATGAGATCCTAACCTTTTCCTTGTTA
ACAAGTCCCCTGTGAAGAATACTCTTGTACCAATATGCTTGCCGCAGTCA
GCTATGGAAAGGCTTCAAGAAGAGCTAAAGGGGTTGATGATTCAAGGATC
TGCGGAGGATTTATGCAACATTAACCAGACTCAGATTTTCAGCAAGCTTT
AAGGGATATATCTCAGTTTACGTAGTAGCTTATTTTGATTATAAACCAAT
AATGCAAGTTATGCGTCCTCTCAAGTTATGTCTAAAACTAAATAATG
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