EY702774

Overview
NameEY702774
Unique NameEY702774
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY702774 vs. ExPASy Swiss-Prot
Match: ARP6_ARATH (Actin-related protein 6 OS=Arabidopsis thaliana GN=ARP6 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 4.116e-30
Identity = 49/81 (60.49%), Postives = 60/81 (74.07%), Query Frame = 3 
Query:    6 RRADLAKKEFDLTNERFLVPHMIFQPAHLGINQAGLAEWMGRAVNACHPYLHSALNQCIILSGGRMSFPLLAEIIDRELRP 248
            ++AD+ K E DLTNERFLVP  +FQPA LG+NQAGLAE + RA+N+CH YL   L Q IIL+GG   FP L E ++ ELRP
Sbjct:  284 KKADMNKNEIDLTNERFLVPETLFQPADLGMNQAGLAECIVRAINSCHSYLQPVLYQSIILTGGSTLFPQLKERLEGELRP 364

HSP 2 Score: 36.5798 bits (83), Expect = 4.116e-30
Identity = 15/27 (55.56%), Postives = 18/27 (66.67%), Query Frame = 1 
Query:  235 GSFAPLCPADYPVKITTREDPLLWAWR 315
            G   PL P  + VKITT+EDP+L  WR
Sbjct:  360 GELRPLVPDHFDVKITTQEDPILGVWR 386

HSP 3 Score: 36.1946 bits (82), Expect = 4.116e-30
Identity = 18/33 (54.55%), Postives = 18/33 (54.55%), Query Frame = 2 
Query:  296 PYYGPGAGRSLLASGPDLPGMCVTMGHYAENGS 394
            P  G   G SLLAS PD   MCVT   Y E GS
Sbjct:  380 PILGVWRGGSLLASSPDFESMCVTKAEYEELGS 412
[Close]
BLAST of EY702774 vs. ExPASy Swiss-Prot
Match: ARP6_ORYSJ (Actin-related protein 6 OS=Oryza sativa subsp. japonica GN=ARP6 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.730e-27
Identity = 44/81 (54.32%), Postives = 59/81 (72.84%), Query Frame = 3 
Query:    6 RRADLAKKEFDLTNERFLVPHMIFQPAHLGINQAGLAEWMGRAVNACHPYLHSALNQCIILSGGRMSFPLLAEIIDRELRP 248
            ++ +L++ EF LTNERFLVP M+F P  LG+NQAGLAE + RA+ ACHP+L   L + IIL+GG   FP   E +++ELRP
Sbjct:  292 KKPELSQNEFVLTNERFLVPEMLFHPIDLGMNQAGLAECIVRAIQACHPHLQPVLFERIILTGGSTLFPRFTERLEKELRP 372

HSP 2 Score: 36.1946 bits (82), Expect = 4.730e-27
Identity = 15/23 (65.22%), Postives = 17/23 (73.91%), Query Frame = 1 
Query:  247 PLCPADYPVKITTREDPLLWAWR 315
            PL P DY VKI  +EDP+L AWR
Sbjct:  372 PLVPDDYQVKIIAQEDPILGAWR 394

HSP 3 Score: 33.8834 bits (76), Expect = 4.730e-27
Identity = 16/33 (48.48%), Postives = 17/33 (51.52%), Query Frame = 2 
Query:  296 PYYGPGAGRSLLASGPDLPGMCVTMGHYAENGS 394
            P  G   G SLLA  PD   MC+T   Y E GS
Sbjct:  388 PILGAWRGGSLLAHRPDFESMCITKSEYEEMGS 420
[Close]
BLAST of EY702774 vs. ExPASy Swiss-Prot
Match: ARP6_ORYSI (Actin-related protein 6 OS=Oryza sativa subsp. indica GN=ARP6 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.730e-27
Identity = 44/81 (54.32%), Postives = 59/81 (72.84%), Query Frame = 3 
Query:    6 RRADLAKKEFDLTNERFLVPHMIFQPAHLGINQAGLAEWMGRAVNACHPYLHSALNQCIILSGGRMSFPLLAEIIDRELRP 248
            ++ +L++ EF LTNERFLVP M+F P  LG+NQAGLAE + RA+ ACHP+L   L + IIL+GG   FP   E +++ELRP
Sbjct:  292 KKPELSQNEFVLTNERFLVPEMLFHPIDLGMNQAGLAECIVRAIQACHPHLQPVLFERIILTGGSTLFPRFTERLEKELRP 372

HSP 2 Score: 36.1946 bits (82), Expect = 4.730e-27
Identity = 15/23 (65.22%), Postives = 17/23 (73.91%), Query Frame = 1 
Query:  247 PLCPADYPVKITTREDPLLWAWR 315
            PL P DY VKI  +EDP+L AWR
Sbjct:  372 PLVPDDYQVKIIAQEDPILGAWR 394

HSP 3 Score: 33.8834 bits (76), Expect = 4.730e-27
Identity = 16/33 (48.48%), Postives = 17/33 (51.52%), Query Frame = 2 
Query:  296 PYYGPGAGRSLLASGPDLPGMCVTMGHYAENGS 394
            P  G   G SLLA  PD   MC+T   Y E GS
Sbjct:  388 PILGAWRGGSLLAHRPDFESMCITKSEYEEMGS 420
The following BLAST results are available for this feature:
BLAST of EY702774 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ARP6_ARATH4.116e-3060.49Actin-related protein 6 OS=Arabidopsis thaliana GN... [more]
ARP6_ORYSJ4.730e-2754.32Actin-related protein 6 OS=Oryza sativa subsp. jap... [more]
ARP6_ORYSI4.730e-2754.32Actin-related protein 6 OS=Oryza sativa subsp. ind... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-012-B01-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702774 ID=EY702774; Name=EY702774; organism=Citrus sinensis; type=EST; length=850bp
GCTGAAGGAGAGCTGATTTGGCAAAAAAGGAGTTTGACTTGACAAATGAA
CGCTTTCTTGTCCCACATATGATCTTTCAACCTGCACATTTGGGAATTAA
CCAGGCTGGTCTAGCTGAGTGGATGGGTCGAGCTGTTAATGCCTGCCATC
CGTATCTTCATTCTGCACTTAATCAATGCATTATATTAAGTGGTGGAAGG
ATGTCATTCCCTCTATTGGCTGAAATTATAGACAGGGAGCTTCGCCCCAC
TATGTCCTGCTGACTATCCAGTCAAAATAACCACCCGTGAAGATCCCTTA
TTATGGGCCTGGCGCAGGACGATCCCTTTTGGCTTCCGGTCCCGATTTGC
CAGGTATGTGTGTCACCATGGGTCATTATGCAGAAAATGGATCTGCACCA
TGTCGCCGGGCGTGCTTATGCCGGCTTCAAAGATGCCCTACACTTTGAGG
CCATCCCACGGTGCCCCTGGTACTAAATCTTGCCATGGATCCGGCGTCTC
TTGTGGAACAAAACAGGGGGGAATCCAGGATTAAAGGCCATGGGAAACAA
TGGGAAAAGGTAGGGACTTTATACACCCCGCCTGTGCGCGCCCCCCGCCC
ACCACCCATCTTGTCCCCCTCCCCCCCTCCCCCTCTCCCGTGCATTCCGC
CCTACTTTTCCCACCAGACGCAGAAAGAGAGTGACAAACATTCCCCAACT
CGGTCTCTGCCGCGCTCCGTGTTTGCGAAACTCCTCAGCACCGGCACCCT
CCCCCGCTTGCCGCATGTGCCCTCCCTCGACACCTCCCTTTAACCCCCTT
CTCGGAGAGCCCCATCTCTCTCCTCGCCCTCAGATTAGACCTCCTCCACC
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