EY702740

Overview
NameEY702740
Unique NameEY702740
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length938
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702740 vs. ExPASy Swiss-Prot
Match: BEL1_ARATH (Homeobox protein BEL1 homolog OS=Arabidopsis thaliana GN=BEL1 PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 3.535e-27
Identity = 79/199 (39.70%), Postives = 108/199 (54.27%), Query Frame = 1
Query:   55 NIHHQTGHQFQLRNSKYLAPAQEILKEFCSLGTKQNDATKL-----KSNKAKQQ--WD----------DENAGSSSRKQ--SLCSLEFMELQKRKTKLLSMLEEADRRYRHYCDPMTAVVSSFEXXXXXXXXXXXXXXXXXXMPRHFICYEMGLLAKFRLQRKYTGDK---NTFVSVKLKPQH*D*IIIEQS*RRQPSY 585
            N  H   HQFQ+ +SKYL+PAQE+L EFCSLG K++D   +     K  K KQQ  WD          D++A +SS+K    L SLEFMELQKRK KLLSMLEE  RRY HY + M    ++FE                  M RHF C + GL+ + +   +  G++   N  VS+  + +     +++Q+ R+Q SY
Sbjct:  183 NHQHHNHHQFQIGSSKYLSPAQELLSEFCSLGVKESDEEVMMMKHKKKQKGKQQEEWDTSHHSNNDQHDQSATTSSKKHVPPLHSLEFMELQKRKAKLLSMLEELKRRYGHYREQMRVAAAAFEAAVGLGGAEIYTALASRAMSRHFRCLKDGLVGQIQATSQALGEREEDNRAVSIAARGETPRLRLLDQALRQQKSY 381          
BLAST of EY702740 vs. ExPASy Swiss-Prot
Match: BLH4_ARATH (BEL1-like homeodomain protein 4 OS=Arabidopsis thaliana GN=BLH4 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 4.628e-19
Identity = 55/151 (36.42%), Postives = 75/151 (49.67%), Query Frame = 1
Query:   73 GHQFQLRNSKYLAPAQEILKEFCSLGTKQNDATKLKSNKAKQQW--------DDENAGSSSRKQSLCSLEFMELQKRKTKLLSMLEEADRRYRHYCDPMTAVVSSFEXXXXXXXXXXXXXXXXXXMPRHFICYEMGLLAKFRLQRKYTGDK 501
            G  + LRNSKY  PAQE+L+EFCS+G       KL  N +               +AG+++    L   + +E Q+RK KLLSMLEE DRRY HYC+ M  VV+SF+                  M RHF C +  +  + +   +  GDK
Sbjct:  233 GGIYTLRNSKYTKPAQELLEEFCSVGRGHFKKNKLSRNNSNPNTTGGGGGGGSSSSAGTANDSPPLSPADRIEHQRRKVKLLSMLEEVDRRYNHYCEQMQMVVNSFDQVMGYGAAVPYTTLAQKAMSRHFRCLKDAVAVQLKRSCELLGDK 383          
BLAST of EY702740 vs. ExPASy Swiss-Prot
Match: BLH2_ARATH (BEL1-like homeodomain protein 2 OS=Arabidopsis thaliana GN=BLH2 PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 3.316e-17
Identity = 57/170 (33.53%), Postives = 80/170 (47.06%), Query Frame = 1
Query:   61 HHQTGHQFQ---------------LRNSKYLAPAQEILKEFCSLGTKQNDATKLKSNKAKQQWDDENAGSSSRKQS-------LCSLEFMELQKRKTKLLSMLEEADRRYRHYCDPMTAVVSSFEXXXXXXXXXXXXXXXXXXMPRHFICYEMGLLAKFRLQRKYTGDKN 504
            HHQ  +QF+               LRNS+Y   AQE+L+EFCS+G       KL ++        +  GSS            L + + +E Q+RK KLL+MLEE DRRY HYC+ M  VV+SF+                  M RHF C +  + A+ +   +  GDK+
Sbjct:  289 HHQVLNQFRSSPAASSSSMAAVNILRNSRYTTAAQELLEEFCSVGRGFLKKNKLGNSSNPNTCGGDGGGSSPSSAGANKEHPPLSASDRIEHQRRKVKLLTMLEEVDRRYNHYCEQMQMVVNSFDIVMGHGAALPYTALAQKAMSRHFRCLKDAVAAQLKQSCELLGDKD 458          
The following BLAST results are available for this feature:
BLAST of EY702740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
BEL1_ARATH3.535e-2739.70Homeobox protein BEL1 homolog OS=Arabidopsis thali... [more]
BLH4_ARATH4.628e-1936.42BEL1-like homeodomain protein 4 OS=Arabidopsis tha... [more]
BLH2_ARATH3.316e-1733.53BEL1-like homeodomain protein 2 OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-011-F12-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702740 ID=EY702740; Name=EY702740; organism=Citrus sinensis; type=EST; length=938bp
GCCGGTATTCCTTAACTCGACCCACGCGTCCGGGGTAAACCTGCTATACC
ACCCAATATTCATCATCAAACTGGGCATCAGTTTCAGCTGAGGAATTCGA
AGTACTTGGCTCCTGCGCAAGAGATTTTAAAAGAATTTTGCAGTCTGGGG
ACTAAGCAAAATGATGCAACCAAGCTAAAATCCAACAAGGCCAAACAACA
GTGGGATGATGAGAATGCCGGTAGCTCTTCAAGAAAGCAATCCCTTTGCT
CCCTTGAATTCATGGAATTGCAGAAAAGAAAGACAAAGCTGCTTTCAATG
CTTGAGGAGGCGGATAGAAGATACAGGCACTACTGCGATCCAATGACAGC
CGTAGTATCTTCCTTTGAAGCTGTGGCGGGTAACGGGGCGGCAAGGGCGC
ATTCCGCTTCGGCTCCCCAGGCCATGCCAAGGCATTTTATATGTTATGAG
ATGGGATTGTTGGCCAAATTCAGGCTACAAAGAAAGTATACGGGCGATAA
AAATACCTTTGTATCTGTAAAATTAAAGCCTCAACACTAAGACTGAATAA
TCATTGAACAGTCTTGAAGACGACAACCAAGCTATTTCAGTAGATCAGAA
AGACTGGAAAGAGAACCTGTGAAAACCCTCATAGCGGCCGCTCTGAAAAG
ATCCCTCTCCCGGACCTTCGGCCTAGGATCAACAAACATTATAATCCATC
TTAACATAAAGGAATATGATAAAACAATATACTTCTCCCATATTCTGACT
CTCCAAAAATATATGCTACAAATAGGGCCTATAATGGAAGCAAAAGGTTA
TGGGAACATCAGTGATGCAAACGTGAATCCAGCACAACGCACTGCCGACA
CCCCAACTGTCATCCGACACAAACGAGACGTGTTTTACCCGACATATCGG
ACTCAGCCAATACCACAAAAATGTGATGTGACGTAAAA
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