EY702729

Overview
NameEY702729
Unique NameEY702729
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length900
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702729 vs. ExPASy Swiss-Prot
Match: COB22_ARATH (Coatomer subunit beta'-2 OS=Arabidopsis thaliana GN=At1g52360 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 6.507e-39
Identity = 85/147 (57.82%), Postives = 101/147 (68.71%), Query Frame = 1
Query:    4 KVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATRGVHPPAEDYVNHADKSYMTLVEAFRHMQIEEEDTLENGDLAH-----------XXXXXXXXXXXXXXXXXXXXXXXPVVVDADSTDGAVLVNGNEAEEQWGTNNEGIPSA 411
            KVN KAAESLADPEEYSNLF+DWQVAL+VE+KA  TRGV+  A+DY +HADKS MTLVEAFR++Q+EEE++LENGD+ H                                    +VD DSTDGAVLVNG+EA+E+WGTNNEG PSA
Sbjct:  780 KVNSKAAESLADPEEYSNLFEDWQVALSVEAKAVETRGVYTGAKDYPSHADKSSMTLVEAFRNLQVEEEESLENGDMDHEEVVAEENGNEQRNEDDVAEHVEEHHEEKEAEEEEGIVDGDSTDGAVLVNGSEADEEWGTNNEGNPSA 926          
BLAST of EY702729 vs. ExPASy Swiss-Prot
Match: COB21_ARATH (Coatomer subunit beta'-1 OS=Arabidopsis thaliana GN=At1g79990 PE=2 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 8.232e-34
Identity = 76/135 (56.30%), Postives = 90/135 (66.67%), Query Frame = 1
Query:    4 KVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATRGVHPPAEDYVNHADKSYMTLVEAFRHMQIEEEDTLENGDLAH---------XXXXXXXXXXXXXXXXXXXXXXXPVVVDADSTDGAVLVNGNEAEEQW 381
            K++PKAAESLADPEEY NLF++WQVAL++E++AA TRGVHPPA DY +HAD+ + TLV+AFR MQIEEE  LE GD+                                   VVVDADSTDGAVLVNGNE+EEQW
Sbjct:  779 KISPKAAESLADPEEYPNLFEEWQVALSLENRAAETRGVHPPAGDYCSHADRDHTTLVDAFRIMQIEEEGRLEQGDVLDEVGEEGEDGEEEEEEDRQEESSDGRQQNVEEEAVVVDADSTDGAVLVNGNESEEQW 913          
BLAST of EY702729 vs. ExPASy Swiss-Prot
Match: COB22_ORYSJ (Coatomer subunit beta'-2 OS=Oryza sativa subsp. japonica GN=Os02g0209100 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.314e-31
Identity = 75/135 (55.56%), Postives = 89/135 (65.93%), Query Frame = 1
Query:    1 QKVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATRGVHPPAEDYVNHADKSYMTLVEAFRHMQIEEEDTL--ENGDLAHXXXXXXXXXXXXXXXXXXXXXXXPVVVDAD-STDGAVLVNGNEAEEQWGTNNE 396
            QKVNPKAAESLADP+EY NLF+DWQ+AL VE+  A  RG++PPAE+Y+ HA++   TLVEAF+ M I  E+ L  ENGD  H                        V V+AD STDGAVLVNGN+ EEQWGTNNE
Sbjct:  779 QKVNPKAAESLADPDEYPNLFEDWQIALNVEANVAPKRGIYPPAEEYIIHAERPNETLVEAFKSMHIHLEEVLPDENGDDTH-------EAIEENGVEESQEDAVEVDVEADGSTDGAVLVNGNDTEEQWGTNNE 906          
BLAST of EY702729 vs. ExPASy Swiss-Prot
Match: COB23_ORYSJ (Putative coatomer subunit beta'-3 OS=Oryza sativa subsp. japonica GN=Os02g0209000 PE=3 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.898e-30
Identity = 72/135 (53.33%), Postives = 89/135 (65.93%), Query Frame = 1
Query:    1 QKVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATRGVHPPAEDYVNHADKSYMTLVEAFRHMQIEEEDTL--ENGDLAHXXXXXXXXXXXXXXXXXXXXXXXPVVVDAD-STDGAVLVNGNEAEEQWGTNNE 396
            QKVNPKAAESLADP EY NLF+DWQ+AL VE+  A  RG++ PA++Y+ HA++   TLVEAF++M+I +E+ L  ENGD  H                        V V+AD STDG VLVNGN+ EEQWGTNNE
Sbjct:  779 QKVNPKAAESLADPNEYPNLFEDWQIALNVEANVAPKRGIYAPAKEYIIHAERPNETLVEAFKNMRIHQEEVLPDENGDDTH-------EAIEENGVEESQEDAVEVDVEADGSTDGTVLVNGNDTEEQWGTNNE 906          
BLAST of EY702729 vs. ExPASy Swiss-Prot
Match: COB23_ARATH (Coatomer subunit beta'-3 OS=Arabidopsis thaliana GN=At3g15980 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.479e-30
Identity = 71/124 (57.26%), Postives = 86/124 (69.35%), Query Frame = 1
Query:    4 KVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATRGVHPPAEDYVNHADKSYMTLVEAFRHMQIEEEDTLENGDLAH---XXXXXXXXXXXXXXXXXXXXXXXPVVVDADSTDGAVLVNGNE 366
            KVNPKAAESLADPEEYSNLF+DWQVAL+VE+  A TRGV+  AE+Y +HADK  +TLVEAFR++Q+E E++LENG++ H                            VVDADSTDGAVLVNG+E
Sbjct:  780 KVNPKAAESLADPEEYSNLFEDWQVALSVEANTAETRGVYTAAENYPSHADKPSITLVEAFRNLQVEAEESLENGNIDHEVAEENGHVENEGDEEEQQEEEVNEEEGVVDADSTDGAVLVNGSE 903          
BLAST of EY702729 vs. ExPASy Swiss-Prot
Match: COB21_ORYSJ (Coatomer subunit beta'-1 OS=Oryza sativa subsp. japonica GN=Os06g0143900 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.318e-26
Identity = 68/131 (51.91%), Postives = 79/131 (60.31%), Query Frame = 1
Query:    4 KVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATRGVHPPAEDYVNHADKSYMTLVEAFRHMQI----EEEDTL-ENGDLAHXXXXXXXXXXXXXXXXXXXXXXXPVVVDADSTDGAVLVNGNEAEEQW 381
            KVNPKAAESLADP EY NLF+DWQVAL VE   A+ R  +PPA++Y+NHA+KS MTLVEAF+ MQ+    E ED L ENG+                           V VDAD  +  VLVNG E EEQW
Sbjct:  780 KVNPKAAESLADPSEYPNLFEDWQVALTVEKNVASRRVHYPPADEYLNHAEKSDMTLVEAFKRMQVIEDEETEDALDENGE---------PDEEVLEENKVEESTDEAVEVDADEPEETVLVNGKEGEEQW 901          
The following BLAST results are available for this feature:
BLAST of EY702729 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
COB22_ARATH6.507e-3957.82Coatomer subunit beta'-2 OS=Arabidopsis thaliana G... [more]
COB21_ARATH8.232e-3456.30Coatomer subunit beta'-1 OS=Arabidopsis thaliana G... [more]
COB22_ORYSJ1.314e-3155.56Coatomer subunit beta'-2 OS=Oryza sativa subsp. ja... [more]
COB23_ORYSJ1.898e-3053.33Putative coatomer subunit beta'-3 OS=Oryza sativa ... [more]
COB23_ARATH2.479e-3057.26Coatomer subunit beta'-3 OS=Arabidopsis thaliana G... [more]
COB21_ORYSJ6.318e-2651.91Coatomer subunit beta'-1 OS=Oryza sativa subsp. ja... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-011-F01-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702729 ID=EY702729; Name=EY702729; organism=Citrus sinensis; type=EST; length=900bp
CAAAAGGTGAACCCAAAAGCTGCTGAATCTCTGGCTGATCCTGAAGAGTA
TTCTAATCTATTTGATGATTGGCAAGTTGCTCTTGCTGTTGAGTCCAAAG
CTGCTGCTACCAGGGGTGTACATCCTCCTGCAGAGGACTATGTAAACCAT
GCAGATAAATCATACATGACGCTTGTGGAGGCTTTCAGACACATGCAAAT
TGAAGAAGAGGACACTCTTGAAAATGGAGATCTTGCTCATGAGGGTTCCG
AACAAAATGGAGAAGAGAATGCAGAGGAACAGAATGGAGAAGAAGGAAGC
CAAGAGGAGCCTGTCGTAGTGGATGCTGATTCAACAGACGGTGCAGTACT
CGTTAACGGTAACGAGGCTGAAGAACAGTGGGGTACGAATAATGAAGGAA
TCCCGTCAGCCTAAAAGCAATTGGTTGGGGCAGTGTGAAAATCCAAATTT
TGTCTCTGTGCTTACACCACGTCATCAGGATTCATGAGGACAGACGGTTC
TAGCTGTATAAGTCCCTTGCTTTAAGCAACCAGGCTTCTTGCTGGAGGCT
GAAGAGAGGTGATTGTAGAGCTGGGTTGTCTCTAATTCTGATGGGGCGGC
ACTGAAGCGCATTTTGAGTTTTGTTGTGGGCATATAGAACACCAGTTTAG
CATCAGTGACGTTCTTTGATCGCTTCTCAAATGGTTGTTTTTACCTATTC
TTTGAAGCCTTTTCCTCACCCCTTTCTAGGGCCTTTGTGGGAATGGAAAA
AAGGGTGAGTTAGCTATCCATTATCCAATTCACCCTTACCCTTATTCCCT
ATTCAAATTTTGAAACGGGGTGGCCCTAAATTTCCGGATTTGGTGGGAAT
ATTTTTCAAAAAACCTTAATGAAATTGCCTTCAAAAGAATTAAAAATAAT
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