EY702728

Overview
NameEY702728
Unique NameEY702728
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length940
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702728 vs. ExPASy Swiss-Prot
Match: RL5_CUCSA (60S ribosomal protein L5 OS=Cucumis sativus GN=RPL5 PE=2 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 4.433e-70
Identity = 136/169 (80.47%), Postives = 148/169 (87.57%), Query Frame = 1
Query:  154 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSDEPTEKTRPFPALLDVALVQTPLVT-VSMTLSGCIRWGI*FP 657
            KAQK+KAYFKRYQVK+KRRREGKTDYRARIRLINQDKNKYNTPKYRFVVR +NKDITAQIISASIAGD+VLASAY+HELP+YGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEG+VEATGEDYS EP +  RPF ALLDV L++T     V   L G +  G+  P
Sbjct:    5 KAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDITAQIISASIAGDLVLASAYSHELPQYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIP 173          
BLAST of EY702728 vs. ExPASy Swiss-Prot
Match: RL52_ARATH (60S ribosomal protein L5-2 OS=Arabidopsis thaliana GN=RPL5B PE=2 SV=3)

HSP 1 Score: 257.684 bits (657), Expect = 7.077e-68
Identity = 135/186 (72.58%), Postives = 150/186 (80.65%), Query Frame = 1
Query:  154 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSDEPTEKTRPFPALLDVALVQTPLVT-VSMTLSGCIRWGI*FPSHGEHISSDLDKELNNL 708
            K+ KS AYFKRYQVK++RRR+GKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI AQI+SASIAGDIV ASAYAHELP+YGL VGLTNYAAAYCTGLLLARRVLKMLEMD EYEG+VEATGED+S EPT+  RPF ALLDV L++T     V   L G +  G+  P H +   +   KE   L
Sbjct:    5 KSSKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIVAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIP-HSDKRFAGFHKENKQL 189          
BLAST of EY702728 vs. ExPASy Swiss-Prot
Match: RL51_ARATH (60S ribosomal protein L5-1 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=2)

HSP 1 Score: 257.299 bits (656), Expect = 9.243e-68
Identity = 135/186 (72.58%), Postives = 150/186 (80.65%), Query Frame = 1
Query:  154 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSDEPTEKTRPFPALLDVALVQTPLVT-VSMTLSGCIRWGI*FPSHGEHISSDLDKELNNL 708
            K+ KS AYFKRYQVK++RRR+GKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI AQI+SASIAGDIV ASAYAHELP+YGL VGLTNYAAAYCTGLLLARRVLKMLEMD EYEG+VEATGED+S EPT+  RPF ALLDV L++T     V   L G +  G+  P H +   +   KE   L
Sbjct:    5 KSTKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIVAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIP-HSDKRFAGFHKENKQL 189          
BLAST of EY702728 vs. ExPASy Swiss-Prot
Match: RL51_ORYSI (60S ribosomal protein L5-1 OS=Oryza sativa subsp. indica GN=RPL5A PE=2 SV=2)

HSP 1 Score: 245.743 bits (626), Expect = 2.783e-64
Identity = 122/169 (72.19%), Postives = 142/169 (84.02%), Query Frame = 1
Query:  154 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSDEPTEKTRPFPALLDVALVQTPLVT-VSMTLSGCIRWGI*FP 657
            K QK+ AY+KR+QVK+KRRR+GKTDYRARIRL NQDKNKYNTPKYRFVVRFTNKDITAQI+ A+IAGDIV+A+AY+HELPRYGLEVGLTNYAAAYCTGLLLARRVLK+  +D EYEG++EATGEDY  EP ++ RPF ALLDV L++T     V   L G +  G+  P
Sbjct:    6 KTQKTNAYYKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRFTNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEYEGNIEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIP 174          
BLAST of EY702728 vs. ExPASy Swiss-Prot
Match: RL51_ORYSJ (60S ribosomal protein L5-1 OS=Oryza sativa subsp. japonica GN=RPL5A PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 8.097e-64
Identity = 122/169 (72.19%), Postives = 141/169 (83.43%), Query Frame = 1
Query:  154 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSDEPTEKTRPFPALLDVALVQTPLVT-VSMTLSGCIRWGI*FP 657
            K QK+ AY KR+QVK+KRRR+GKTDYRARIRL NQDKNKYNTPKYRFVVRFTNKDITAQI+ A+IAGDIV+A+AY+HELPRYGLEVGLTNYAAAYCTGLLLARRVLK+  +D EYEG++EATGEDY  EP ++ RPF ALLDV L++T     V   L G +  G+  P
Sbjct:    6 KTQKTNAYHKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRFTNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEYEGNIEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIP 174          
BLAST of EY702728 vs. ExPASy Swiss-Prot
Match: RL52_ORYSJ (60S ribosomal protein L5-2 OS=Oryza sativa subsp. japonica GN=RPL5B PE=3 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 1.429e-60
Identity = 120/169 (71.01%), Postives = 138/169 (81.66%), Query Frame = 1
Query:  154 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSDEPTEKTRPFPALLDVALVQTPLVT-VSMTLSGCIRWGI*FP 657
            K QK+ AYFKR+QVK+KRRR+GKTDYRARIRL NQDKNKYNTPKYRFV   TNKDITAQI+ A+IAGDIV+A+AY+HELPRYGLEVGLTNYAAAYCTGLLLARRVL +  +D EYEG+VEATGEDY  EP ++ RPF ALLDV L++T     V   L G +  G+  P
Sbjct:    9 KTQKTHAYFKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFV---TNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLTLRGLDQEYEGNVEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIP 174          
BLAST of EY702728 vs. ExPASy Swiss-Prot
Match: RL5_CAEBR (60S ribosomal protein L5 OS=Caenorhabditis briggsae GN=rpl-5 PE=3 SV=2)

HSP 1 Score: 204.912 bits (520), Expect = 5.444e-52
Identity = 109/182 (59.89%), Postives = 128/182 (70.33%), Query Frame = 1
Query:  154 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSDEPTEKTRPFPALLDVALVQTPLVT-VSMTLSGCIRWGI*FPSHGEHISSDLDKE 696
            K  K+KAYFKRYQVK KRRREGKTDY AR RL  QDKNKYNTPKYR +VR TNKDI AQ+  + I GD+V+ASAYAHELPRYGL+ GLTNYAAAY TGLLLARR LK + +D+ Y+GH E TGEDY+ E      PF A+LD+ L +T   + +   + G    GI  P H E      D+E
Sbjct:    5 KVIKNKAYFKRYQVKLKRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRLTNKDIVAQLAYSKIEGDVVVASAYAHELPRYGLKAGLTNYAAAYATGLLLARRHLKAIGLDSTYKGHEELTGEDYNVEEEGDRAPFKAVLDIGLARTTTGSKIFAVMKGVADGGINVP-HSESRFFGFDQE 185          
BLAST of EY702728 vs. ExPASy Swiss-Prot
Match: RL5_CAEEL (60S ribosomal protein L5 OS=Caenorhabditis elegans GN=rpl-5 PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 1.213e-51
Identity = 107/182 (58.79%), Postives = 129/182 (70.88%), Query Frame = 1
Query:  154 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSDEPTEKTRPFPALLDVALVQTPLVT-VSMTLSGCIRWGI*FPSHGEHISSDLDKE 696
            K  K+KAYFKRYQVK +RRREGKTDY AR RL  QDKNKYNTPKYR +VR TNKD+ AQ+  + I GD+V+ASAY+HELPRYGL+VGLTNYAAAY TGLLLARR LK + +D+ Y+GH E TGEDY+ E      PF A+LD+ L +T   + +   + G    GI  P H E      D+E
Sbjct:    5 KVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDVVAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYKGHEELTGEDYNVEEEGDRAPFKAVLDIGLARTTTGSKIFAVMKGVADGGINVP-HSESRFFGFDQE 185          
BLAST of EY702728 vs. ExPASy Swiss-Prot
Match: RL5_STYCL (60S ribosomal protein L5 OS=Styela clava GN=RPL5 PE=3 SV=3)

HSP 1 Score: 194.897 bits (494), Expect = 2.277e-50
Identity = 97/149 (65.10%), Postives = 114/149 (76.51%), Query Frame = 1
Query:  154 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGED-YSDEPTEKTRPFPALLDVALVQT 597
            K  K+KAYFKRYQVKYKRRR+GKTDY AR RL+ QDKNKYNTPKYR +VRFTNKDI  QI  A I GD+V+ +AYAHELPRYG++VGLTNYAAAYCTGLLL+RR+L    +D  YEG  E  G++ Y ++   K   F A LDV L +T
Sbjct:    5 KVVKNKAYFKRYQVKYKRRRQGKTDYFARKRLVVQDKNKYNTPKYRMIVRFTNKDIVCQIAYARIEGDVVICAAYAHELPRYGVKVGLTNYAAAYCTGLLLSRRLLNKFGLDEIYEGQTEIDGDEFYVEDVDGKPGAFRAFLDVGLART 153          

HSP 2 Score: 26.1794 bits (56), Expect = 2.277e-50
Identity = 10/18 (55.56%), Postives = 11/18 (61.11%), Query Frame = 2
Query:  626 QGAFDGGFDFPHMENIFP 679
            +GA DGG D PH    FP
Sbjct:  164 KGAADGGLDIPHSTKRFP 181          
BLAST of EY702728 vs. ExPASy Swiss-Prot
Match: RL5_SUBDO (60S ribosomal protein L5 OS=Suberites domuncula GN=RPL5 PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.287e-50
Identity = 106/170 (62.35%), Postives = 123/170 (72.35%), Query Frame = 1
Query:  154 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSDEPT-EKTRPFPALLDVALVQTPLVT-VSMTLSGCIRWGI*FP 657
            K  K+KAYFKRYQVK++RRREGKTDYRAR RL+ QDKNKYNTPKYR V+RFTN DI  QII A I GD VL SAYAHELPRYG++VGLTNYAAAYCTGLLLARR+L  L +  +Y G  +  GED++ E   +  RPF A LDV L +T     V   + G +  GI  P
Sbjct:    5 KVIKNKAYFKRYQVKFRRRREGKTDYRARKRLVVQDKNKYNTPKYRIVIRFTNTDIICQIIYAKIEGDKVLVSAYAHELPRYGVKVGLTNYAAAYCTGLLLARRLLTNLGLADKYAGQTDIDGEDFNVEHMGDGPRPFRAFLDVGLTRTTTGNRVFAAMKGAVDGGIDIP 174          
The following BLAST results are available for this feature:
BLAST of EY702728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
RL5_CUCSA4.433e-7080.4760S ribosomal protein L5 OS=Cucumis sativus GN=RPL... [more]
RL52_ARATH7.077e-6872.5860S ribosomal protein L5-2 OS=Arabidopsis thaliana... [more]
RL51_ARATH9.243e-6872.5860S ribosomal protein L5-1 OS=Arabidopsis thaliana... [more]
RL51_ORYSI2.783e-6472.1960S ribosomal protein L5-1 OS=Oryza sativa subsp. ... [more]
RL51_ORYSJ8.097e-6472.1960S ribosomal protein L5-1 OS=Oryza sativa subsp. ... [more]
RL52_ORYSJ1.429e-6071.0160S ribosomal protein L5-2 OS=Oryza sativa subsp. ... [more]
RL5_CAEBR5.444e-5259.8960S ribosomal protein L5 OS=Caenorhabditis briggsa... [more]
RL5_CAEEL1.213e-5158.7960S ribosomal protein L5 OS=Caenorhabditis elegans... [more]
RL5_STYCL2.277e-5065.1060S ribosomal protein L5 OS=Styela clava GN=RPL5 P... [more]
RL5_SUBDO2.287e-5062.3560S ribosomal protein L5 OS=Suberites domuncula GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-011-E12-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702728 ID=EY702728; Name=EY702728; organism=Citrus sinensis; type=EST; length=940bp
GGNNGNGCATTTGCCACCCTTGGCCCTTTCCGGACTTCTTCCTCGACCAC
GCGTCCGGTTAGGGTTTACCACATTGGATTTAGCTCGCGGCTCCTTCACA
ACTTCTCGAACTCTGCTGCTTCTACACTTTGAGCTTCAGCAATGGCCTTT
GCCAAAGCTCAAAAGTCAAAAGCTTACTTTAAGCGATATCAAGTTAAGTA
CAAGAGAAGGCGAGAGGGAAAGACTGACTATCGGGCTAGGATTCGCCTGA
TCAACCAAGATAAAAACAAGTACAACACGCCAAAGTATCGGTTTGTTGTG
CGATTCACCAACAAAGATATCACTGCACAAATTATATCTGCCAGCATAGC
CGGGGATATAGTCCTTGCATCTGCTTATGCCCATGAGCTTCCCCGTTATG
GACTTGAGGTGGGCCTCACTAATTATGCAGCAGCTTATTGCACTGGACTC
CTCTTGGCCCGCCGAGTCCTGAAAATGCTTGAGATGGATGCTGAGTATGA
GGGGCACGTTGAGGCAACAGGAGAGGACTATTCAGATGAGCCAACTGAGA
AAACGAGGCCTTTCCCCGCCCTGCTTGATGTCGCTCTTGTGCAAACACCA
CTGGTAACCGTGTCTATGACGCTTTCAGGGTGCATTCGATGGGGGATTTG
ATTTCCCTCACATGGAGAACATATTTCCTCTGATCTCGATAAGGAATTAA
ACAATTTGACCCTCAACTTCACCCCCAAAACATAATATGTCATCACCCCC
CGCCCTACTCGAGGACGTTGGTTCGCAAACCAGCGCGACAACCGCCAGAC
CCGCGTGTGTGTAAAAGTTCCCAAAAGCACAGCCGCAAAAACCTCACATA
GCTGACTACAAACCGACACTCTAGTCATCGGTACAAACCGTATTCTCGGA
AATATTAGGAAGGAACCCCCTCATCAGGATCTTAGGACAC
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