EY702723

Overview
NameEY702723
Unique NameEY702723
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10002 contig Csv1_Contig10002:1..885. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702723 vs. ExPASy Swiss-Prot
Match: TOC34_ARATH (Translocase of chloroplast 34, chloroplastic OS=Arabidopsis thaliana GN=TOC34 PE=1 SV=2)

HSP 1 Score: 270.781 bits (691), Expect = 7.368e-72
Identity = 143/263 (54.37%), Postives = 182/263 (69.20%), Query Frame = 2
Query:   80 ASQVIREWMGIQQFPPATQTXXXXXXXXXXQENVNTLTILVMGKGGVGKSSTVNSIIGEKAVTVSTFQSEGPRPVMVSRSRAGFTLNIVDTPGLIEGGYVNYHAIQLIKRFLLNKTIDVLLYVDRLDVYRVDNLDKQITRAITDNFGEQIWKRALIVLTHAQLSLPDGLDYEVFCSKRSEALLKFVSPSTWMKKKTFRVHLYLLSWLRTVGDVPRMKMMKRFFQMGRLGF-QI*SNYHKSRVEWEQSSSL*TKLVEGPTPTRR 865
            A Q +REW+GIQQFPPATQ+          +E+V++LT+LVMGKGGVGKSSTVNS+IGEKA  VSTFQSEG RP +VSR+R+GFTLNI+DTPGLIEGGYVN  AI +IKRFLLN TIDVLLYVDRLDVYRVD+LD+Q+  AITD FG++IWK++ +VLTHAQ S PDGL+Y  F SKRS ALLK +     +KK+  +     +  +   G   + +  ++    G      + +   +      ++  +  KLVEGP P  R
Sbjct:    3 ALQTLREWIGIQQFPPATQSKLLEILGKYKEEDVSSLTVLVMGKGGVGKSSTVNSVIGEKAAAVSTFQSEGLRPTLVSRTRSGFTLNIIDTPGLIEGGYVNDQAINIIKRFLLNMTIDVLLYVDRLDVYRVDDLDRQVVGAITDAFGKEIWKKSALVLTHAQFSPPDGLNYNHFVSKRSNALLKVIQTGAQLKKQDLQGFSIPVILVENSGRCHKNESDEKILPCGTSWIPNLFNKITEISFNGNKAIHVDKKLVEGPNPNER 265          
BLAST of EY702723 vs. ExPASy Swiss-Prot
Match: TOC34_PEA (Translocase of chloroplast 34 OS=Pisum sativum GN=TOC34 PE=1 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 3.656e-71
Identity = 134/197 (68.02%), Postives = 156/197 (79.19%), Query Frame = 2
Query:   71 MSMASQVIREWMGIQQFPPATQTXXXXXXXXXXQENVNTLTILVMGKGGVGKSSTVNSIIGEKAVTVSTFQSEGPRPVMVSRSRAGFTLNIVDTPGLIEGGYVNYHAIQLIKRFLLNKTIDVLLYVDRLDVYRVDNLDKQITRAITDNFGEQIWKRALIVLTHAQLSLPDGLDYEVFCSKRSEALLKFVSPSTWMKK 661
            M+   Q +REW GI  F PATQT          QE+VN+LTILVMGKGGVGKSSTVNSIIGE+ V++S FQSEGPRPVMVSRSRAGFTLNI+DTPGLIEGGY+N  A+ +IK FLL+KTIDVLLYVDRLD YRVDNLDK + +AITD+FG+ IW +A++ LTHAQ S PDGL Y+ F SKRSEALL+ V     +KK
Sbjct:    1 MASQQQTVREWSGINTFAPATQTKLLELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNKAIVALTHAQFSPPDGLPYDEFFSKRSEALLQVVRSGASLKK 197          

HSP 2 Score: 78.9518 bits (193), Expect = 4.109e-14
Identity = 43/92 (46.74%), Postives = 59/92 (64.13%), Query Frame = 1
Query:  601 LLQKVRGSSKIC*PQYLDEKKDIQGSFVPVVLVENSGRCAKNENDEKVLPNGTAWIPNLVK-LSQKSC*MGTKLFSVNKVG*GPNPNEKEDL 873
            LLQ VR  + +        KKD Q S +PVVL+ENSGRC KN++DEKVLPNG AWIP+LV+ +++ +      +F    +  GPNPN++  L
Sbjct:  185 LLQVVRSGASL--------KKDAQASDIPVVLIENSGRCNKNDSDEKVLPNGIAWIPHLVQTITEVALNKSESIFVDKNLIDGPNPNQRGKL 268          
BLAST of EY702723 vs. ExPASy Swiss-Prot
Match: TOC33_ARATH (Translocase of chloroplast 33, chloroplastic OS=Arabidopsis thaliana GN=TOC33 PE=1 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 2.296e-65
Identity = 120/194 (61.86%), Postives = 153/194 (78.87%), Query Frame = 2
Query:   89 VIREWMGIQQFPPATQTXXXXXXXXXXQENVNTLTILVMGKGGVGKSSTVNSIIGEKAVTVSTFQSEGPRPVMVSRSRAGFTLNIVDTPGLIEGGYVNYHAIQLIKRFLLNKTIDVLLYVDRLDVYRVDNLDKQITRAITDNFGEQIWKRALIVLTHAQLSLPDGLDYEVFCSKRSEALLKFVSPSTWMKKKTF 670
            ++REW+G QQFP ATQ           Q+++N++T+LV+GKGGVGKSSTVNS+IGE+ V VS FQ+EG RPVMVSR+  GFT+NI+DTPGL+E GYVN+ A++LIK FL+N+TIDVLLYVDRLDVYRVD LDKQ+  AIT  FG++IW + L+VLTHAQ S PD L YE F SKRS++LLK +   + M+K+ F
Sbjct:    4 LVREWVGFQQFPAATQEKLIEFFGKLKQKDMNSMTVLVLGKGGVGKSSTVNSLIGEQVVRVSPFQAEGLRPVMVSRTMGGFTINIIDTPGLVEAGYVNHQALELIKGFLVNRTIDVLLYVDRLDVYRVDELDKQVVIAITQTFGKEIWCKTLLVLTHAQFSPPDELSYETFSSKRSDSLLKTIRAGSKMRKQEF 197          
BLAST of EY702723 vs. ExPASy Swiss-Prot
Match: TC120_ARATH (Translocase of chloroplast 120, chloroplastic OS=Arabidopsis thaliana GN=TOC120 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.946e-26
Identity = 54/153 (35.29%), Postives = 86/153 (56.21%), Query Frame = 2
Query:  191 TILVMGKGGVGKSSTVNSIIGEKAVTVSTFQSEGPRPVMVSRSRAGFTLNIVDTPGLIEGG---YVNYHAIQLIKRFLLNKTIDVLLYVDRLDVYRVDNLDKQITRAITDNFGEQIWKRALIVLTHAQLSLPDG-----LDYEVFCSKRSEAL 625
            TI+V+GK GVGKS+T+NSI  E  ++   FQ    +   +     G  + ++DTPGL+      + N   ++ ++ F+     D++LY+DRLD+   D+ D  + R ITD FG  IW  A++ LTHA  + PDG       Y++F ++RS  +
Sbjct:  458 TIMVLGKSGVGKSATINSIFDELKISTDAFQVGTKKVQDIEGFVQGIKVRVIDTPGLLPSWSDQHKNEKILKSVRAFIKKSPPDIVLYLDRLDMQSRDSGDMPLLRTITDVFGPSIWFNAIVGLTHAASAPPDGPNGTASSYDMFVTQRSHVI 610          

HSP 2 Score: 40.4318 bits (93), Expect = 2.946e-26
Identity = 18/35 (51.43%), Postives = 22/35 (62.86%), Query Frame = 1
Query:  685 PVVLVENSGRCAKNENDEKVLPNGTAWIPNLVKLS 789
            PV LVEN   C  N   ++VLPNG  W P+L+ LS
Sbjct:  626 PVSLVENHSACRTNRAGQRVLPNGQVWKPHLLLLS 660          
BLAST of EY702723 vs. ExPASy Swiss-Prot
Match: TC132_ARATH (Translocase of chloroplast 132, chloroplastic OS=Arabidopsis thaliana GN=TOC132 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 4.101e-25
Identity = 56/153 (36.60%), Postives = 81/153 (52.94%), Query Frame = 2
Query:  191 TILVMGKGGVGKSSTVNSIIGEKAVTVSTFQSEGPRPVMVSRSRAGFTLNIVDTPGLIEGGY---VNYHAIQLIKRFLLNKTIDVLLYVDRLDVYRVDNLDKQITRAITDNFGEQIWKRALIVLTHAQLSLPDG-----LDYEVFCSKRSEAL 625
            TI+V+GK GVGKS+T+NSI  E       FQ    R   V     G  + ++DTPGL+        N   +  +K F+     D++LY+DRLD+   D+ D  + R I+D FG  IW  A++ LTHA    PDG       Y++F ++RS  +
Sbjct:  576 TIMVLGKSGVGKSATINSIFDEVKFCTDAFQMGTKRVQDVEGLVQGIKVRVIDTPGLLPSWSDQAKNEKILNSVKAFIKKNPPDIVLYLDRLDMQSRDSGDMPLLRTISDVFGPSIWFNAIVGLTHAASVPPDGPNGTASSYDMFVTQRSHVI 728          

HSP 2 Score: 40.4318 bits (93), Expect = 4.101e-25
Identity = 18/35 (51.43%), Postives = 22/35 (62.86%), Query Frame = 1
Query:  685 PVVLVENSGRCAKNENDEKVLPNGTAWIPNLVKLS 789
            PV LVEN   C  N   ++VLPNG  W P+L+ LS
Sbjct:  744 PVSLVENHSACRTNRAGQRVLPNGQVWKPHLLLLS 778          
BLAST of EY702723 vs. ExPASy Swiss-Prot
Match: TC159_ARATH (Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana GN=TOC159 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.985e-24
Identity = 56/157 (35.67%), Postives = 85/157 (54.14%), Query Frame = 2
Query:  170 QENVNTLTILVMGKGGVGKSSTVNSIIGEKAVTVSTFQSEGPRPVMVSRSRAGFTLNIVDTPGLIEGGY---VNYHAIQLIKRFLLNKTIDVLLYVDRLDVYRVDNLDKQITRAITDNFGEQIWKRALIVLTHAQLSLPDG-----LDYEVFCSKRS 616
            +E + +L ILV+GK GVGKS+T+NSI+G +  ++  F         +S +  G  +  +DTPGL         N   +  +K+ +     D++LYVDRLD    D  +  + R IT + G  IWK A++ LTHA  + PDG     L Y+VF ++ S
Sbjct:  850 EELIFSLNILVLGKAGVGKSATINSILGNQIASIDAFGLSTTSVREISGTVNGVKITFIDTPGLKSAAMDQSTNAKMLSSVKKVMKKCPPDIVLYVDRLDTQTRDLNNLPLLRTITASLGTSIWKNAIVTLTHAASAPPDGPSGTPLSYDVFVAQCS 1006          

HSP 2 Score: 36.965 bits (84), Expect = 1.985e-24
Identity = 18/34 (52.94%), Postives = 19/34 (55.88%), Query Frame = 1
Query:  685 PVVLVENSGRCAKNENDEKVLPNGTAWIPNLVKL 786
            PV LVEN   C KN    KVLPNG  W   L+ L
Sbjct: 1030 PVSLVENHPLCRKNREGVKVLPNGQTWRSQLLLL 1063          
BLAST of EY702723 vs. ExPASy Swiss-Prot
Match: GTPA_DICDI (GTP-binding protein A OS=Dictyostelium discoideum GN=gtpA PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.214e-21
Identity = 50/135 (37.04%), Postives = 79/135 (58.52%), Query Frame = 2
Query:  182 NTLTILVMGKGGVGKSSTVNSIIGEKAVTVSTFQSEGPRPVMVSRSRAGFTLNIVDTPGLIE--GGYVNYHAIQLIKRFLLNKTIDVLLYVDRLDVYRVDNLDKQITRAITDNFGEQIWKRALIVLTHAQLSLPD 580
            N   +L++G+ GVGKSST+N++ G   + V + +S    P   SR   GF LNI+DTPG ++  G  V+ + +  I+R+L  KTI  +L+V++    R D   + +    T+  G Q+W+ A +VLT+A   LPD
Sbjct:  150 NECNVLLLGRTGVGKSSTLNTVFGID-IPVHSSESCTQDPFTYSRVVNGFKLNIIDTPGFLDSQGELVDSNNMIKIQRYLSGKTIHCVLFVEKFTETRFDGAHQLVINQFTEKLGPQLWRNAAVVLTYANSVLPD 283          

HSP 2 Score: 33.113 bits (74), Expect = 3.214e-21
Identity = 15/39 (38.46%), Postives = 23/39 (58.97%), Query Frame = 1
Query:  664 DIQGSFVPVVLVENSGRCAKNENDEKVLPNGTAWIPNLV 780
            D     +PV  +ENS RC +NE  ++VL +GT  +  L+
Sbjct:  324 DYPPKHIPVYAMENSRRCKRNEQGQRVLIDGTPCLHLLI 362          
BLAST of EY702723 vs. ExPASy Swiss-Prot
Match: TOC90_ARATH (Translocase of chloroplast 90, chloroplastic OS=Arabidopsis thaliana GN=TOC90 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.540e-20
Identity = 49/159 (30.82%), Postives = 83/159 (52.20%), Query Frame = 2
Query:  185 TLTILVMGKGGVGKSSTVNSIIGEKAVTVSTFQSEGPRPVMVSRSRAGFTLNIVDTPGL----IEGGYVNYHAIQLIKRFLLNKTIDVLLYVDRLDVYRVDNLDKQITRAITDNFGEQIWKRALIVLTHAQLSLP----DGLDYEVFCSKRSEALLKFV 637
            +L ILV+GK GVGKS+T+NSI G+       F+    R   V  + +G  +  +DTPG           N   +  IKR++  +  DV+LY+DRLD+  +   D  + + IT+ FG  IW   ++V+TH+  +        ++YE +  +R + +  ++
Sbjct:  166 SLRILVLGKTGVGKSATINSIFGQPKSETDAFRPGTDRIEEVMGTVSGVKVTFIDTPGFHPLSSSSTRKNRKILLSIKRYVKKRPPDVVLYLDRLDMIDMRYSDFSLLQLITEIFGAAIWLNTILVMTHSAATTEGRNGQSVNYESYVGQRMDVVQHYI 324          

HSP 2 Score: 38.1206 bits (87), Expect = 1.540e-20
Identity = 18/34 (52.94%), Postives = 20/34 (58.82%), Query Frame = 1
Query:  685 PVVLVENSGRCAKNENDEKVLPNGTAWIPNLVKL 786
            PV+LVEN   C KN   E VLPNG  W P  + L
Sbjct:  336 PVLLVENHPSCKKNLAGEYVLPNGVVWKPQFMFL 369          
The following BLAST results are available for this feature:
BLAST of EY702723 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
TOC34_ARATH7.368e-7254.37Translocase of chloroplast 34, chloroplastic OS=Ar... [more]
TOC34_PEA3.656e-7168.02Translocase of chloroplast 34 OS=Pisum sativum GN=... [more]
TOC33_ARATH2.296e-6561.86Translocase of chloroplast 33, chloroplastic OS=Ar... [more]
TC120_ARATH2.946e-2635.29Translocase of chloroplast 120, chloroplastic OS=A... [more]
TC132_ARATH4.101e-2536.60Translocase of chloroplast 132, chloroplastic OS=A... [more]
TC159_ARATH1.985e-2435.67Translocase of chloroplast 159, chloroplastic OS=A... [more]
GTPA_DICDI3.214e-2137.04GTP-binding protein A OS=Dictyostelium discoideum ... [more]
TOC90_ARATH1.540e-2030.82Translocase of chloroplast 90, chloroplastic OS=Ar... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-011-E07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702723 ID=EY702723; Name=EY702723; organism=Citrus sinensis; type=EST; length=883bp
TAAGGATTCAGCAGTAGCAGACGAGGTGCAAACAAATTCCCCAAAAACCC
AAATTCACACTCTCCGACATATGTCTATGGCGTCTCAAGTAATACGTGAA
TGGATGGGAATTCAGCAGTTCCCACCTGCCACTCAAACAAAATTGCTTGA
ATTGTTGGGAAAACTTAAACAAGAGAATGTGAACACATTGACCATACTTG
TGATGGGGAAGGGTGGCGTTGGGAAATCATCAACTGTAAACTCTATCATA
GGAGAGAAAGCGGTTACTGTTAGTACGTTTCAGTCGGAAGGACCAAGACC
TGTGATGGTTTCCCGCTCCAGGGCTGGATTTACATTGAACATTGTTGACA
CTCCTGGGCTCATAGAAGGTGGATATGTCAATTATCATGCTATTCAGCTA
ATCAAACGTTTCCTTCTGAACAAAACTATCGATGTTCTACTGTATGTCGA
CCGTCTGGATGTTTATAGGGTAGATAATTTGGATAAGCAGATTACTAGAG
CCATAACGGATAATTTTGGTGAACAAATATGGAAGAGGGCTTTGATTGTT
CTCACACATGCTCAACTCTCATTGCCAGACGGATTAGATTATGAAGTTTT
TTGCTCCAAAAGGTCAGAGGCTCTTCTAAAATTTGTTAGCCCCAGTACCT
GGATGAAAAAAAAGACATTCAGGGTTCATTTGTACCTGTTGTCTTGGTTG
AGAACAGTGGGAGATGTGCCAAGAATGAAAATGATGAAAAGGTTCTTCCA
AATGGGACGGCTTGGATTCCAAATTTAGTCAAACTATCACAAAAGTCGTG
TTGAATGGGAACAAAGCTCTTCTCTGTGAACAAAGTTGGTTGAGGGCCCA
ACCCCAACGAGAAGGAAGATCTTTAATCCTTTC
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