EY702722

Overview
NameEY702722
Unique NameEY702722
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10001 contig Csv1_Contig10001:1..894. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702722 vs. ExPASy Swiss-Prot
Match: UBA3_ARATH (NEDD8-activating enzyme E1 catalytic subunit OS=Arabidopsis thaliana GN=ECR1 PE=1 SV=2)

HSP 1 Score: 312.383 bits (799), Expect = 2.245e-84
Identity = 155/212 (73.11%), Postives = 171/212 (80.66%), Query Frame = 3
Query:  255 GNLVGPTFEPGTELRDDLQEYARILVVGAGGLGCELLKDLALSGFKNLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRIEDKDISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREEQSNPW*MGVLKVLRVMQGLLYXESHRGFECTIWLFPPXVKFPLCTLAETPRTAAHCXEYAHLIKWD 890
            GNLV P F PG  LRDD+++Y RILV+GAGGLGCELLKDLALSGF+NLEVIDMDRIEV+NLNRQFLFR+EDVGKPKAEVAAKRVMERVSGV IVPHF RIEDK+I FYNDFNII LGLDSIEAR YIN VAC FLEY  DD P+ E   P   G  +  +    ++       FECTI+LFPP VKFPLCTLAETPR AAHC EYAHLI+W+
Sbjct:   26 GNLVDPGFVPGPGLRDDIRDYVRILVIGAGGLGCELLKDLALSGFRNLEVIDMDRIEVTNLNRQFLFRIEDVGKPKAEVAAKRVMERVSGVEIVPHFSRIEDKEIEFYNDFNIIALGLDSIEARKYINGVACGFLEYNEDDTPKRETIKPMVDGGTEGFKGHARVILPGVTPCFECTIYLFPPQVKFPLCTLAETPRNAAHCIEYAHLIQWE 237          
BLAST of EY702722 vs. ExPASy Swiss-Prot
Match: UBA3_CAEEL (NEDD8-activating enzyme E1 catalytic subunit OS=Caenorhabditis elegans GN=uba-3 PE=2 SV=2)

HSP 1 Score: 207.608 bits (527), Expect = 7.789e-53
Identity = 109/208 (52.40%), Postives = 134/208 (64.42%), Query Frame = 3
Query:  270 PTFEPGTELRDDLQEYARILVVGAGGLGCELLKDLALSGFKNLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRIEDKDISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREEQSNPW*MGVLKVLRVMQGLLYXESHRGFECTIWLFPPXVKFPLCTLAETPRTAAHCXEYAHLIKWDE 893
            P F PG E  + LQ   +ILV+GAGGLGCELLK+LALSGF+ +EVIDMD I+VSNLNRQFLFR  DVGK KAEVAA  V +RV G  +  H CRIEDK   FY  F+II+ GLDSI AR +IN + C  +    D KP E    P   G  +  +    ++Y +     +CT+ L+PP V FPLCT+A TPR   HC EY  ++ W E
Sbjct:   28 PWFVPGPENFEALQN-TKILVIGAGGLGCELLKNLALSGFRTIEVIDMDTIDVSNLNRQFLFRESDVGKSKAEVAAAFVQQRVVGCQVTAHNCRIEDKGQEFYRKFSIIICGLDSIPARRWINGMLCDLVLEMADGKPDENTIIPMIDGGTEGFKGNARVIYPKFTACIDCTLDLYPPQVNFPLCTIAHTPRLPEHCIEYIKVVVWPE 234          
BLAST of EY702722 vs. ExPASy Swiss-Prot
Match: UBA3_RAT (NEDD8-activating enzyme E1 catalytic subunit OS=Rattus norvegicus GN=Uba3 PE=1 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.121e-50
Identity = 104/212 (49.06%), Postives = 137/212 (64.62%), Query Frame = 3
Query:  252 AGNLVGPTFEPGTELRDDLQEYARILVVGAGGLGCELLKDLALSGFKNLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRIEDKDISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREEQSNPW*MGVLKVLRVMQGLLYXESHRGFECTIWLFPPXVKFPLCTLAETPRTAAHCXEYAHLIKW 887
            +G    P FEP TE    L +  ++LV+GAGGLGCELLK+LALSGF+ + VIDMD I+VSNLNRQFLFR +DVG+PKAEVAA+ + +RV   N+VPHF +I+D + +FY  F+IIV GLDSI AR +IN +  S L YE D         P   G  +  +    ++        ECT+ L+PP V FP+CT+A  PR   HC EY  +++W
Sbjct:   48 SGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDVGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYE-DGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQW 258          
BLAST of EY702722 vs. ExPASy Swiss-Prot
Match: UBA3_MOUSE (NEDD8-activating enzyme E1 catalytic subunit OS=Mus musculus GN=Uba3 PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.121e-50
Identity = 104/212 (49.06%), Postives = 137/212 (64.62%), Query Frame = 3
Query:  252 AGNLVGPTFEPGTELRDDLQEYARILVVGAGGLGCELLKDLALSGFKNLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRIEDKDISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREEQSNPW*MGVLKVLRVMQGLLYXESHRGFECTIWLFPPXVKFPLCTLAETPRTAAHCXEYAHLIKW 887
            +G    P FEP TE    L +  ++LV+GAGGLGCELLK+LALSGF+ + VIDMD I+VSNLNRQFLFR +DVG+PKAEVAA+ + +RV   N+VPHF +I+D + +FY  F+IIV GLDSI AR +IN +  S L YE D         P   G  +  +    ++        ECT+ L+PP V FP+CT+A  PR   HC EY  +++W
Sbjct:   48 SGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDVGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYE-DGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQW 258          
BLAST of EY702722 vs. ExPASy Swiss-Prot
Match: UBA3_PONAB (NEDD8-activating enzyme E1 catalytic subunit OS=Pongo abelii GN=UBA3 PE=2 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 2.770e-50
Identity = 103/212 (48.58%), Postives = 137/212 (64.62%), Query Frame = 3
Query:  252 AGNLVGPTFEPGTELRDDLQEYARILVVGAGGLGCELLKDLALSGFKNLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRIEDKDISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREEQSNPW*MGVLKVLRVMQGLLYXESHRGFECTIWLFPPXVKFPLCTLAETPRTAAHCXEYAHLIKW 887
            +G    P FEP TE    L +  ++LV+GAGGLGCELLK+LALSGF+ + VIDMD I+VSNLNRQFLFR +D+G+PKAEVAA+ + +RV   N+VPHF +I+D + +FY  F+IIV GLDSI AR +IN +  S L YE D         P   G  +  +    ++        ECT+ L+PP V FP+CT+A  PR   HC EY  +++W
Sbjct:   48 SGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYE-DGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQW 258          
BLAST of EY702722 vs. ExPASy Swiss-Prot
Match: UBA3_HUMAN (NEDD8-activating enzyme E1 catalytic subunit OS=Homo sapiens GN=UBA3 PE=1 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 2.770e-50
Identity = 103/212 (48.58%), Postives = 137/212 (64.62%), Query Frame = 3
Query:  252 AGNLVGPTFEPGTELRDDLQEYARILVVGAGGLGCELLKDLALSGFKNLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRIEDKDISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREEQSNPW*MGVLKVLRVMQGLLYXESHRGFECTIWLFPPXVKFPLCTLAETPRTAAHCXEYAHLIKW 887
            +G    P FEP TE    L +  ++LV+GAGGLGCELLK+LALSGF+ + VIDMD I+VSNLNRQFLFR +D+G+PKAEVAA+ + +RV   N+VPHF +I+D + +FY  F+IIV GLDSI AR +IN +  S L YE D         P   G  +  +    ++        ECT+ L+PP V FP+CT+A  PR   HC EY  +++W
Sbjct:   48 SGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYE-DGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQW 258          
BLAST of EY702722 vs. ExPASy Swiss-Prot
Match: UBA3_DANRE (NEDD8-activating enzyme E1 catalytic subunit OS=Danio rerio GN=uba3 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 3.063e-49
Identity = 101/211 (47.87%), Postives = 135/211 (63.98%), Query Frame = 3
Query:  255 GNLVGPTFEPGTELRDDLQEYARILVVGAGGLGCELLKDLALSGFKNLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRIEDKDISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREEQSNPW*MGVLKVLRVMQGLLYXESHRGFECTIWLFPPXVKFPLCTLAETPRTAAHCXEYAHLIKW 887
            G    P FE  TE    L +  +ILV+GAGGLGCELLKDLALSGF+++ V+DMD I+VSNLNRQFLFR +DVG+PKAEVAA  V +RV G ++VPHF +I+D D +FY  F+I+V GLDS+ AR ++N +  S L YE D         P   G  +  +    ++        +CT+ L+PP + FP+CT+A  PR   HC EY  ++ W
Sbjct:   48 GPFTHPDFEASTESLQFLLDTCKILVIGAGGLGCELLKDLALSGFRHIHVVDMDTIDVSNLNRQFLFRPKDVGRPKAEVAADFVNDRVPGCSVVPHFKKIQDLDETFYRQFHIVVCGLDSVIARRWMNGMLLSLLIYE-DGVLDPSSIIPLIDGGTEGFKGNARVILPGMTACIDCTLELYPPQINFPMCTIASMPRLPEHCVEYVRMLLW 257          
BLAST of EY702722 vs. ExPASy Swiss-Prot
Match: UBA3_DICDI (NEDD8-activating enzyme E1 catalytic subunit OS=Dictyostelium discoideum GN=uba3 PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.520e-48
Identity = 96/212 (45.28%), Postives = 136/212 (64.15%), Query Frame = 3
Query:  255 GNLVGPTFEPGTE----LRDDLQEYARILVVGAGGLGCELLKDLALSGFKNLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRIEDKDISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREEQSNPW*MGVLKVLRVMQGLLYXESHRGFECTIWLFPPXVKFPLCTLAETPRTAAHCXEYAHL 878
            G    P+FEP T+    + + LQ   ++LV+GAGGLGCE+LK+LALSGF+N++VIDMD I++SNLNRQFLFR +DVGK KAEVAA  +  R++G N+ PH CRI+DKD  +Y  F I++ GLDSIEAR +IN +  + +          +   P   G  +  +    ++  +    FEC++  FPP V + +CT+A TPR   HC ++A L
Sbjct:   25 GPFASPSFEPDTKASPNIMNGLQNDFKVLVIGAGGLGCEILKNLALSGFRNIDVIDMDTIDISNLNRQFLFRRKDVGKSKAEVAAAFINSRITGCNVTPHKCRIQDKDEDYYRQFKIVIAGLDSIEARRWINGLLVNLVVVNDSGDIEPDTIIPLVDGGTEGFKGQARVILPKISSCFECSLDAFPPQVSYAICTIANTPRVPEHCIQWALL 236          
BLAST of EY702722 vs. ExPASy Swiss-Prot
Match: UBA3_DROME (NEDD8-activating enzyme E1 catalytic subunit OS=Drosophila melanogaster GN=CG13343 PE=1 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 5.776e-48
Identity = 99/206 (48.06%), Postives = 128/206 (62.14%), Query Frame = 3
Query:  276 FEPGTELRDDLQEYARILVVGAGGLGCELLKDLALSGFKNLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRIEDKDISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREEQSNPW*MGVLKVLRVMQGLLYXESHRGFECTIWLFPPXVKFPLCTLAETPRTAAHCXEYAHLIKWDE 893
            F   +E  + LQ   ++L++GAGGLGCELLKDLAL GF NL VIDMD IE+SNLNRQFLFR  D+G  KAE AA+ +  RV    + PHF +I+D D SFY  F+++V GLDSI AR +IN +  S L YE D         P   G  +  +    ++        ECT+ LFPP V +PLCT+A TPR   HC EY  +I+W++
Sbjct:   35 FAASSENLEFLQTKCQVLIIGAGGLGCELLKDLALMGFGNLHVIDMDTIELSNLNRQFLFRRTDIGASKAECAARFINARVPTCRVTPHFKKIQDFDESFYQQFHLVVCGLDSIVARRWINGMLLSMLRYEEDGTIDTSSIVPMIDGGTEGFKGNARVILPGFTACIECTLDLFPPQVNYPLCTIANTPRLPEHCIEYVKIIQWEK 240          
BLAST of EY702722 vs. ExPASy Swiss-Prot
Match: UBA3_SCHPO (NEDD8-activating enzyme E1 catalytic subunit OS=Schizosaccharomyces pombe GN=uba3 PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 4.009e-41
Identity = 82/190 (43.16%), Postives = 125/190 (65.79%), Query Frame = 3
Query:  318 ARILVVGAGGLGCELLKDLALSGFKNLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRIEDKDISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREEQSNPW*MGVLKVLRVMQGLLYXESHRGFECTIWLFPPXVKFPLCTLAETPRTAAHCXEYAHLIKW 887
            ++IL++GAGGLGCE+LKDLALSGF++L VIDMD I+++NLNRQFLF   ++ +PKA VAA  +M+R+    + P + +I+DK I FY +F +I+ GLDS+EAR +IN+   +    +T D        P   G  + L+    ++       +EC++ +  P + +P+CTLA TPR   HC E+A+L++W
Sbjct:   45 SKILIIGAGGLGCEILKDLALSGFRDLSVIDMDTIDITNLNRQFLFNESNIDEPKANVAASMIMKRIPSTVVTPFYGKIQDKTIEFYKEFKLIICGLDSVEARRWINSTLVAIA--KTGD------LIPLVDGGSEGLKGQARVIIPTITSCYECSLDMLTPKISYPICTLANTPRLPEHCVEWAYLLEW 226          
The following BLAST results are available for this feature:
BLAST of EY702722 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
UBA3_ARATH2.245e-8473.11NEDD8-activating enzyme E1 catalytic subunit OS=Ar... [more]
UBA3_CAEEL7.789e-5352.40NEDD8-activating enzyme E1 catalytic subunit OS=Ca... [more]
UBA3_RAT2.121e-5049.06NEDD8-activating enzyme E1 catalytic subunit OS=Ra... [more]
UBA3_MOUSE2.121e-5049.06NEDD8-activating enzyme E1 catalytic subunit OS=Mu... [more]
UBA3_PONAB2.770e-5048.58NEDD8-activating enzyme E1 catalytic subunit OS=Po... [more]
UBA3_HUMAN2.770e-5048.58NEDD8-activating enzyme E1 catalytic subunit OS=Ho... [more]
UBA3_DANRE3.063e-4947.87NEDD8-activating enzyme E1 catalytic subunit OS=Da... [more]
UBA3_DICDI1.520e-4845.28NEDD8-activating enzyme E1 catalytic subunit OS=Di... [more]
UBA3_DROME5.776e-4848.06NEDD8-activating enzyme E1 catalytic subunit OS=Dr... [more]
UBA3_SCHPO4.009e-4143.16NEDD8-activating enzyme E1 catalytic subunit OS=Sc... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-011-E06-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702722 ID=EY702722; Name=EY702722; organism=Citrus sinensis; type=EST; length=894bp
CCACGCGTCCGGTTTTCCGGTCCATACTCAAAACTAAAATTACAAAAAAG
AGCAAAGAAGGCGGAGGTTTAAAAGCTTCACAGCTGACACTCCCCACTCA
CAGACCCAGCGTCAAAGCCAAGCTATCAGCATATTTTCGCAACGGCTAAA
TCAGAACCAAATACAGTGATAGTAAGCGAGTGTGAGAATTGTTGCAAATG
GCTGACACGGCACCGAGCCGATCCCGAGACCTAGACAAGCTCTTACTCCG
AGCCGGCAATCTCGTGGGCCCCACTTTCGAACCCGGCACAGAATTGAGAG
ATGACTTACAAGAATATGCGCGAATTTTGGTTGTTGGAGCCGGTGGATTG
GGCTGCGAATTGTTGAAAGACTTAGCTTTATCGGGTTTTAAAAACCTAGA
GGTCATTGATATGGACCGTATCGAAGTTTCGAATCTCAATCGCCAGTTTC
TTTTCAGGATGGAAGATGTTGGTAAGCCAAAGGCAGAGGTGGCAGCAAAG
CGTGTCATGGAGAGAGTTAGTGGTGTAAATATTGTCCCACATTTTTGCCG
AATTGAGGATAAAGACATTTCATTTTACAATGATTTTAATATCATTGTCC
TTGGTCTCGATTCCATCGAGGCTCGGAGCTATATAAATGCTGTAGCATGT
AGTTTTCTTGAATATGAGACTGATGACAAGCCACGAGAAGAACAATCAAA
CCCATGGTAGATGGGGGTACTGAAGGTTTTAAGGGTCATGCAAGGGTTAT
TATACCANGAGTCACACCGTGGCTTTGAGTGTACCATCTGGCTTTTCCCC
CCTCANGTGAAGTTTCCTTTATGCACTCTTGCNGAAACCCCTAGAACAGC
TGCTCATTGTATNGAATATGCCCATTTAATCAAGTGGGATGAAG
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