EY702705

Overview
NameEY702705
Unique NameEY702705
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9997 contig Csv1_Contig9997:1..871. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702705 vs. ExPASy Swiss-Prot
Match: RELA_CORGL (GTP pyrophosphokinase OS=Corynebacterium glutamicum GN=relA PE=3 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 2.490e-32
Identity = 72/145 (49.66%), Postives = 94/145 (64.83%), Query Frame = 3
Query:    3 NISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 431
            NI+  VL GR K  +SI+ KM+ +    D+I D+ G+R++V+N  +CY A+ VVH L+  +PG+ KDYI+ P+F  YQSLHT V G G  PLEVQ RT +MH  AEFG AAHWRYKE    HS     +  + W R +L WQ EA
Sbjct:  258 NIAAEVL-GRPKHYWSIYQKMIVRGRDFDDIFDLVGIRILVDNVNNCYAAIGVVHSLFNALPGRFKDYISAPRFGVYQSLHTTVMGPGGKPLEVQARTHDMHYNAEFGIAAHWRYKETKGSHSGEQAEVDQMAWMRQLLDWQKEA 401          
BLAST of EY702705 vs. ExPASy Swiss-Prot
Match: RELA_HAEIN (GTP pyrophosphokinase OS=Haemophilus influenzae GN=relA PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.247e-32
Identity = 66/140 (47.14%), Postives = 91/140 (65.00%), Query Frame = 3
Query:    3 NISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 422
            NI  + + GR K +YSI  KM KK L    ++D+  +R+IV+  +DCY AL +VH  +  +P +  DY+  PK NGYQS+HTVV G+G  P+EVQIRT++MH  AE G AAHW+YKEG+    S   + + W R +L WQ
Sbjct:  245 NIEQVEVYGRPKHIYSIWRKMQKKHLEFSGLYDVRAVRIIVQKLQDCYTALGIVHTQFKHLPKEFDDYVANPKPNGYQSIHTVVLGKGGKPIEVQIRTQQMHDDAELGMAAHWKYKEGNTGSMSAYEEKIAWLRKLLAWQ 384          
BLAST of EY702705 vs. ExPASy Swiss-Prot
Match: RELA_MYCLE (Probable GTP pyrophosphokinase OS=Mycobacterium leprae GN=relA PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.236e-31
Identity = 66/141 (46.81%), Postives = 90/141 (63.83%), Query Frame = 3
Query:   27 GRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ------HSSFVLQMVEWARWVLTWQCEA 431
            GR K  +SI+ KM+ K    D+IHD+ G+R++ +   DCY A+ VVH LW  + G+ KDYI +P++  YQSLHT V G    PLEVQIRT++MH  AE+G AAHWRYKE   +      H++  +  + W R +L WQ EA
Sbjct:  290 GRPKHYWSIYQKMIVKGRDFDDIHDLVGIRILCDEIRDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVGPEGKPLEVQIRTRDMHRTAEYGIAAHWRYKEAKGRNGVLHPHAAAEIDDMAWMRQLLDWQREA 430          
BLAST of EY702705 vs. ExPASy Swiss-Prot
Match: RELA_MYCTU (Probable GTP pyrophosphokinase OS=Mycobacterium tuberculosis GN=relA PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.614e-31
Identity = 66/141 (46.81%), Postives = 90/141 (63.83%), Query Frame = 3
Query:   27 GRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ------HSSFVLQMVEWARWVLTWQCEA 431
            GR K  +SI+ KM+ K    D+IHD+ G+R++ +   DCY A+ VVH LW  + G+ KDYI +P++  YQSLHT V G    PLEVQIRT++MH  AE+G AAHWRYKE   +      H++  +  + W R +L WQ EA
Sbjct:  293 GRPKHYWSIYQKMIVKGRDFDDIHDLVGVRILCDEIRDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVGPEGKPLEVQIRTRDMHRTAEYGIAAHWRYKEAKGRNGVLHPHAAAEIDDMAWMRQLLDWQREA 433          
BLAST of EY702705 vs. ExPASy Swiss-Prot
Match: RELA_MYCBO (Probable GTP pyrophosphokinase OS=Mycobacterium bovis GN=relA PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.614e-31
Identity = 66/141 (46.81%), Postives = 90/141 (63.83%), Query Frame = 3
Query:   27 GRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ------HSSFVLQMVEWARWVLTWQCEA 431
            GR K  +SI+ KM+ K    D+IHD+ G+R++ +   DCY A+ VVH LW  + G+ KDYI +P++  YQSLHT V G    PLEVQIRT++MH  AE+G AAHWRYKE   +      H++  +  + W R +L WQ EA
Sbjct:  293 GRPKHYWSIYQKMIVKGRDFDDIHDLVGVRILCDEIRDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVGPEGKPLEVQIRTRDMHRTAEYGIAAHWRYKEAKGRNGVLHPHAAAEIDDMAWMRQLLDWQREA 433          
BLAST of EY702705 vs. ExPASy Swiss-Prot
Match: SPOT_SYNY3 (Probable guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Synechocystis sp. (strain PCC 6803) GN=spoT PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.009e-31
Identity = 69/144 (47.92%), Postives = 91/144 (63.19%), Query Frame = 3
Query:    6 ISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCE 428
            I    L GR K LY I+ KM  +    +EI+DI  LR+IVE++ +CY+AL VVH ++  +PG+ KDYI  PK N YQSLHT V G    PLE+QIRT+EMH  AE+G AAHW+YKE     ++ +    E   W R +L WQ +
Sbjct:  260 IEHFELQGRPKHLYGIYYKMTSQDKAFEEIYDIAALRIIVESKGECYRALSVVHDVFKPIPGRFKDYIGLPKPNRYQSLHTTVLGLTSRPLEIQIRTEEMHHVAEYGIAAHWKYKESGGSENATLTSTDEKFTWLRQLLDWQSD 403          
BLAST of EY702705 vs. ExPASy Swiss-Prot
Match: RELA_PHOAS (GTP pyrophosphokinase OS=Photobacterium angustum (strain S14 / CCUG 15956) GN=relA PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 8.855e-30
Identity = 76/184 (41.30%), Postives = 101/184 (54.89%), Query Frame = 3
Query:   27 GRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ--HSSFVLQMVEWARWVLTWQCEAMS--------------KDR--SFVGNGDSIKPPCTFPSHAADCPFSY 524
            GR K +YSI  KM KK L  DE+ D+  +R++ E  +DCY AL VVH  +  +P +  DY+  PK NGYQS+HTVV G     +E+QIRTK+MH ++E G AAHW+YKEG       S   + + W R +L WQ E MS               DR  +F   GD +      PS+A    F+Y
Sbjct:  250 GRPKHIYSIWRKMQKKSLEFDELFDVRAVRIVAEELQDCYAALGVVHTKYRHLPKEFDDYVANPKPNGYQSIHTVVLGPEGKTIEIQIRTKQMHEESELGVAAHWKYKEGTASGGAQSAYDEKINWLRKLLAWQ-EEMSDSGEMLDELRSQVFDDRVYAFTPKGDVV----DLPSNATPLDFAY 428          
BLAST of EY702705 vs. ExPASy Swiss-Prot
Match: RELA_STRCO (GTP pyrophosphokinase OS=Streptomyces coelicolor GN=relA PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.157e-29
Identity = 67/149 (44.97%), Postives = 88/149 (59.06%), Query Frame = 3
Query:   27 GRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV---------------LQMVEWARWVLTWQCE 428
            GR K  YS++ KM+ +     EI+D+ G+R++V+   DCY AL  VH  W  VPG+ KDYI  PKFN YQSLHT V G G  P+E+QIRT +MH +AE+G AAHW+YK+     +S V               L  + W R +L WQ E
Sbjct:  337 GRPKHYYSVYQKMIVRGRDFAEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPGGKPVELQIRTFDMHRRAEYGIAAHWKYKQEAVAGASKVRTDAPKSSGKSKDDHLNDMAWLRQLLDWQKE 485          
BLAST of EY702705 vs. ExPASy Swiss-Prot
Match: RELA_SHIFL (GTP pyrophosphokinase OS=Shigella flexneri GN=relA PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.510e-29
Identity = 64/136 (47.06%), Postives = 84/136 (61.76%), Query Frame = 3
Query:   27 GRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCE 428
            GR K +YSI  KM KK L  DE+ D+  +R++ E  +DCY AL +VH  +  +P +  DY+  PK NGYQS+HTVV G G   +E+QIRTK+MH  AE G AAHW+YKEG       S     + W R ++ WQ E
Sbjct:  251 GRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEE 386          
BLAST of EY702705 vs. ExPASy Swiss-Prot
Match: RELA_ECOLI (GTP pyrophosphokinase OS=Escherichia coli (strain K12) GN=relA PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.510e-29
Identity = 64/136 (47.06%), Postives = 84/136 (61.76%), Query Frame = 3
Query:   27 GRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCE 428
            GR K +YSI  KM KK L  DE+ D+  +R++ E  +DCY AL +VH  +  +P +  DY+  PK NGYQS+HTVV G G   +E+QIRTK+MH  AE G AAHW+YKEG       S     + W R ++ WQ E
Sbjct:  251 GRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEE 386          
The following BLAST results are available for this feature:
BLAST of EY702705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
RELA_CORGL2.490e-3249.66GTP pyrophosphokinase OS=Corynebacterium glutamicu... [more]
RELA_HAEIN4.247e-3247.14GTP pyrophosphokinase OS=Haemophilus influenzae GN... [more]
RELA_MYCLE1.236e-3146.81Probable GTP pyrophosphokinase OS=Mycobacterium le... [more]
RELA_MYCTU1.614e-3146.81Probable GTP pyrophosphokinase OS=Mycobacterium tu... [more]
RELA_MYCBO1.614e-3146.81Probable GTP pyrophosphokinase OS=Mycobacterium bo... [more]
SPOT_SYNY38.009e-3147.92Probable guanosine-3',5'-bis(diphosphate) 3'-pyrop... [more]
RELA_PHOAS8.855e-3041.30GTP pyrophosphokinase OS=Photobacterium angustum (... [more]
RELA_STRCO1.157e-2944.97GTP pyrophosphokinase OS=Streptomyces coelicolor G... [more]
RELA_SHIFL1.510e-2947.06GTP pyrophosphokinase OS=Shigella flexneri GN=relA... [more]
RELA_ECOLI1.510e-2947.06GTP pyrophosphokinase OS=Escherichia coli (strain ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-011-C10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702705 ID=EY702705; Name=EY702705; organism=Citrus sinensis; type=EST; length=871bp
AAAACATCTCCTTCCTTGTTCTATGTGGGCGGCATAAAAGCTTGTACAGC
ATTCACTGCAAAATGTTGAAAAAGAAGCTGACCATGGATGAAATCCATGA
TATCTATGGTCTTCGTTTAATTGTTGAAAATGAGGAAGACTGCTACCAAG
CACTGAGAGTTGTTCATCAGTTGTGGGCTGAAGTACCTGGAAAGATGAAG
GATTACATAACCCGGCCCAAGTTCAACGGGTATCAGTCGCTTCACACAGT
GGTGACAGGTGAAGGTCTGGTTCCACTTGAAGTTCAAATCCGAACAAAAG
AGATGCATTTGCAGGCTGAGTTTGGGTTTGCTGCTCATTGGAGATATAAA
GAAGGTGATTGCCAGCATTCTTCTTTTGTGCTTCAGATGGTTGAGTGGGC
TAGATGGGTTCTTACCTGGCAGTGTGAGGCAATGAGCAAAGATCGTTCTT
TTGTTGGCAATGGTGACTCCATCAAGCCACCATGCACGTTTCCCTCACAT
GCTGCTGATTGCCCATTTTCTTATAAGCCTCAGTGCAGCCATGATGGACC
TGTCTTTGTCATCATGATTGAGAATGATAAGATGTCAGTGCAGGAGTTTC
CTACAAGCTCAACAGTAATGGATTTGCTGGAAAGAGCCGGACGGGGAAGC
TCAAGATGGTCTCCGTATGGGTTCCCTCTGAAGGAAGAATTGAGGCCAAA
GCTGAACCACAAGGCAGTAGGTGATCCCAGATGTAAGTTGAAAATGGGTG
ATGTGGTAGAGCTCACTCCAGCTATACCTGACAAATCTTTTACGGAATAC
AGAGAAGAGATCCAGCGGATGTATGAGCGNAGCCTGGCAGTATCAACACA
GGACCTGCTGTCACAGCATGG
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