EY702695
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702695 vs. ExPASy Swiss-Prot
Match: FAD6C_ARATH (Omega-6 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD6 PE=1 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 3.977e-24 Identity = 65/118 (55.08%), Postives = 81/118 (68.64%), Query Frame = 1 Query: 121 MACRLADSMFLFMGPHQRPTGSQKIGCFS---SPGLCQLKWESLLVKGVKHK--RCSIP-SRGTRFIQAVAVPVAPPSEDSADCRKQIAESYGFRQIGEPLPENVTMKDVIDSLPKKV 456 MA R+ADS+F F GP Q K+ S SPG+ +K LL+KG H+ RC P R I+AVA PVAPPS DSA+ R+Q+AESYGFRQIGE LPENVT+KD++D+LPK+V Sbjct: 1 MASRIADSLFAFTGPQQCLPRVPKLAASSARVSPGVYAVKPIDLLLKGRTHRSRRCVAPVKRRIGCIKAVAAPVAPPSADSAEDREQLAESYGFRQIGEDLPENVTLKDIMDTLPKEV 118
BLAST of EY702695 vs. ExPASy Swiss-Prot
Match: FAD6C_SOYBN (Omega-6 fatty acid desaturase, chloroplastic OS=Glycine max PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 8.293e-22 Identity = 53/112 (47.32%), Postives = 72/112 (64.29%), Query Frame = 1 Query: 121 MACRLADSMFLFMGPHQRPTGSQKIGCFSSPGLCQLKWESLLVKGVKHKRCSIPSRGTRFIQAVAVPVAPPSEDSADCRKQIAESYGFRQIGEPLPENVTMKDVIDSLPKKV 456 MAC LADS+ LF G +Q+P + I SPG+ L L+ K + +R + I AVA+PV P +SA+ RKQ+AE YGFRQ+GEPL ++VT+KDVI+ LPK+V Sbjct: 1 MACTLADSLLLFKGSYQKPVLRRDIAARYSPGIFSLNSNGLIQKRFRRQRNFVTRNKVTVIHAVAIPVQPAPVESAEYRKQLAEDYGFRQVGEPLSDDVTLKDVINPLPKEV 112
BLAST of EY702695 vs. ExPASy Swiss-Prot
Match: FAD6C_BRANA (Omega-6 fatty acid desaturase, chloroplastic OS=Brassica napus PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 5.375e-21 Identity = 54/113 (47.79%), Postives = 76/113 (67.26%), Query Frame = 1 Query: 121 MACRLADSMFLFMGPHQ-RPTGSQKIGCFSSPGLCQLKWESLLVKGVKHKRCSIPSRGTRFIQAVAVPVAPPSEDSADCRKQIAESYGFRQIGEPLPENVTMKDVIDSLPKKV 456 MA R+ADS+F F GP Q P + SPG+ ++ LL+KG + + I+AV VPVAPPS D+A+ R+Q+AESYGF+QIG+ LP+NVT+KD++D+LPK+V Sbjct: 1 MASRIADSLFAFTGPQQCLPRAPKLASARLSPGVYAVRPIDLLLKGTRRTFLVPAKKRIGCIKAVFVPVAPPSADNAEDREQLAESYGFKQIGQDLPDNVTLKDIMDTLPKEV 113
BLAST of EY702695 vs. ExPASy Swiss-Prot
Match: FAD6C_SPIOL (Omega-6 fatty acid desaturase, chloroplastic OS=Spinacia oleracea GN=FAD6 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.515e-15 Identity = 50/113 (44.25%), Postives = 71/113 (62.83%), Query Frame = 1 Query: 205 SSPGLCQLKWESLLVKGVKHKRCSIPSRGTR----FIQAVAVPVAPPSE----DSADCRKQIAESYGFRQIGEPLPENVTMKDVIDSLPKKVLFLFASSCTLNAYVVLLETTS 519 +S G+ +KW+ ++ + H R + +GTR +QAVAVPVA PS D+ + KQ+AE YGF+QIGEPLP++VTM+D+I SLPK+V F + T VL+ TS Sbjct: 27 NSAGISCIKWQRPCLRNLGHVRLNQQRKGTRRKSTLVQAVAVPVAQPSAFPPTDNTEHLKQLAERYGFQQIGEPLPDDVTMRDIITSLPKQV---FEINDTKAWGTVLISVTS 136 The following BLAST results are available for this feature:
BLAST of EY702695 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY702695 ID=EY702695; Name=EY702695; organism=Citrus sinensis; type=EST; length=987bpback to top |