EY702638

Overview
NameEY702638
Unique NameEY702638
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length907
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702638 vs. ExPASy Swiss-Prot
Match: NUDT9_ARATH (Nudix hydrolase 9 OS=Arabidopsis thaliana GN=NUDT9 PE=2 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 5.414e-70
Identity = 116/168 (69.05%), Postives = 137/168 (81.55%), Query Frame = 2
Query:  131 SAYKLLLSCPHGFSSSQVSVVFDGSYDRVPHPDTNLENSISEIWDSRVQNNKSLFNGQKFRYGGHIMRGEGGSSVE-SHVCLHLGLTDYRTFVGTNLNPLWEKFLVPSEDDVIQCQHTASPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSH 631
            S Y+LLLSCP G S SQVSV F  S+DR+P  D  LE+SIS++W+ R Q N SLFNGQKFRYGG+ +  + GS+ E  HVCL LGLTDYRTFVGTNL+ LWEKFLV SEDD ++C+HT+SPLGNGAV+ETSDKKI++L+RSNNVGEFPGH+VFPGGHPEP   GI  H
Sbjct:   13 SRYQLLLSCPSGLSPSQVSVDFSKSHDRIPRQDPGLEDSISQVWEQRSQGNSSLFNGQKFRYGGYCLDDDDGSTNEVPHVCLRLGLTDYRTFVGTNLSSLWEKFLVTSEDDSVRCRHTSSPLGNGAVIETSDKKIIVLRRSNNVGEFPGHYVFPGGHPEPTAVGIDYH 180          

HSP 2 Score: 39.6614 bits (91), Expect = 5.414e-70
Identity = 32/69 (46.38%), Postives = 38/69 (55.07%), Query Frame = 1
Query:  655 VYKHXVSQEMFDSITREVVEEIGVPSESL--PLNFLQCTHFSL-VYPAGVWMLNSCFFLHKCSLQSTEI 852
            V    V+QEMFDSI  EVVEE G+P+ SL  PL F+  +   L V PA        FF  KCS  S +I
Sbjct:  191 VLNKKVTQEMFDSIICEVVEETGIPASSLSSPL-FIGISRRELNVRPA-------MFFYLKCSHHSDDI 251          
BLAST of EY702638 vs. ExPASy Swiss-Prot
Match: NUD22_RAT (Nucleoside diphosphate-linked moiety X motif 22 OS=Rattus norvegicus GN=Nudt22 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.009e-20
Identity = 64/163 (39.26%), Postives = 86/163 (52.76%), Query Frame = 2
Query:  128 DSAYKLLLSCPHG-FSSSQVSVVFDGSYDRVPHPDTNLENSISEIWDSRVQNNKSLFNGQKFRYGGHIMRGEGGSSVESHVCLHLGLTDYRTFVGTNLNPLWEKFLVPSEDDVIQCQ-HTASPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQ 610
            D    L+L CP G  S  QVSV    ++DR P P+   + +I+ IW++R+Q    +F+  KFR     +     SS E  + LHLGLT YR F+GTN +            D    Q + A PLG GA + T+D  ++ L+RS  V E PG    PGGHPEPQ
Sbjct:    2 DPEVSLMLLCPPGGLSQEQVSVELSPAHDRRPLPEG--DKTITAIWETRLQAQPWIFDAPKFRLHSATL---ASSSPEPQLLLHLGLTSYRDFLGTNWSSSASWLRQQGATDWGDKQAYLADPLGVGAALVTADDFLVFLRRSQQVAEAPGLVDVPGGHPEPQ 159          
BLAST of EY702638 vs. ExPASy Swiss-Prot
Match: NUD22_MOUSE (Nucleoside diphosphate-linked moiety X motif 22 OS=Mus musculus GN=Nudt22 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.433e-19
Identity = 67/173 (38.73%), Postives = 87/173 (50.29%), Query Frame = 2
Query:  128 DSAYKLLLSCP-HGFSSSQVSVVFDGSYDRVPHPDTNLENSISEIWDSRVQNNKSLFNGQKFRYGGHIMRGEGGSSVESHVCLHLGLTDYRTFVGTNLNPLWEKFLVPSEDDVIQCQ-HTASPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQ---DAGITSH 631
            D    LLL CP  G S  QV+V    ++DR P P    + +I+ IW++R Q    +F+  KFR     +     SS E  + LHLGLT YR F+GTN +            D    Q + A PLG GA + T+D  ++ L+RS  V E PG    PGGHPEPQ     GI  H
Sbjct:    2 DPEVSLLLLCPLGGLSQEQVAVELSPAHDRRPLPGG--DKAITAIWETRQQAQPWIFDAPKFRLHSATLVS---SSPEPQLLLHLGLTSYRDFLGTNWSSSASWLRQQGAADWGDKQAYLADPLGVGAALVTADDFLVFLRRSQQVAEAPGLVDVPGGHPEPQALCSGGIPRH 169          
BLAST of EY702638 vs. ExPASy Swiss-Prot
Match: NUD22_BOVIN (Nucleoside diphosphate-linked moiety X motif 22 OS=Bos taurus GN=NUDT22 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.149e-17
Identity = 62/164 (37.80%), Postives = 82/164 (50.00%), Query Frame = 2
Query:  128 DSAYKLLLSCPHG-FSSSQVSVVFDGSYDRVPHPDTNLENSISEIWDSRVQNNKSLFNGQKFRYGGHIMRGEGGSSVESHVCLHLGLTDYRTFVGTNL--NPLWEKFLVPSEDDVIQCQHTASPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQ 610
            D    LLL CP G     QV      +YDR P P    + +I  IW+SR+Q    LFN  KFR     +   G    +  + L LGLT Y+ F+GTN   +  W +    ++    Q  + A PLG GA + T+D  ++ L+RS  V E PG    PGGHPEPQ
Sbjct:    2 DPEVSLLLQCPPGGLPEKQVRAELSPAYDRRPLPGG--DKAIIAIWESRLQAQPWLFNAPKFRLHSATLAPTGLPGPQ--LLLRLGLTSYQDFLGTNWASSAAWLRQQGATDWGDKQA-YLADPLGVGAALATADDFLVFLRRSGQVAEAPGLVDVPGGHPEPQ 160          
BLAST of EY702638 vs. ExPASy Swiss-Prot
Match: NUD22_HUMAN (Nucleoside diphosphate-linked moiety X motif 22 OS=Homo sapiens GN=NUDT22 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 2.059e-16
Identity = 58/163 (35.58%), Postives = 80/163 (49.08%), Query Frame = 2
Query:  128 DSAYKLLLSCPHG-FSSSQVSVVFDGSYDRVPHPDTNLENSISEIWDSRVQNNKSLFNGQKFRYGGHIMRGEGGSSVESHVCLHLGLTDYRTFVGTNLNPLWEKFLVPSEDDVIQCQ-HTASPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQ 610
            D    LLL CP G     Q+      ++DR P P    + +I+ IW++R++    LF+  KFR     +   G    +  + L LGLT YR F+GTN +            D    Q + A PLG GA + T+D  ++ L+RS  V E PG    PGGHPEPQ
Sbjct:    2 DPEVTLLLQCPGGGLPQEQIQAELSPAHDRRPLPGG--DEAITAIWETRLKAQPWLFDAPKFRLHSATLAPIGSRGPQ--LLLRLGLTSYRDFLGTNWSSSAAWLRQQGATDWGDTQAYLADPLGVGAALATADDFLVFLRRSRQVAEAPGLVDVPGGHPEPQ 160          
The following BLAST results are available for this feature:
BLAST of EY702638 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
NUDT9_ARATH5.414e-7069.05Nudix hydrolase 9 OS=Arabidopsis thaliana GN=NUDT9... [more]
NUD22_RAT4.009e-2039.26Nucleoside diphosphate-linked moiety X motif 22 OS... [more]
NUD22_MOUSE4.433e-1938.73Nucleoside diphosphate-linked moiety X motif 22 OS... [more]
NUD22_BOVIN4.149e-1737.80Nucleoside diphosphate-linked moiety X motif 22 OS... [more]
NUD22_HUMAN2.059e-1635.58Nucleoside diphosphate-linked moiety X motif 22 OS... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-010-D07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702638 ID=EY702638; Name=EY702638; organism=Citrus sinensis; type=EST; length=907bp
GAATTCCCGTGCTAACACACGCGTCCGGAGAGTTTGGATACCGAGAAAAA
GGGCACCTACTAAAGTTTAAAGAGTAATTTAATCGAACAGGTGTTTTGCA
CCTGGGATTCCAATGGAGCAGGAAGCAGACTCAGCTTACAAGCTTCTTCT
TTCGTGCCCACATGGTTTTTCATCATCTCAGGTCTCTGTGGTTTTTGATG
GATCATATGATAGGGTTCCTCATCCTGACACTAACTTAGAGAACTCCATT
TCTGAGATATGGGATTCAAGGGTTCAGAACAACAAGTCCTTGTTTAATGG
TCAAAAGTTCAGGTATGGAGGGCATATAATGCGAGGTGAAGGTGGATCCA
GCGTAGAATCTCATGTGTGCCTCCATCTTGGATTGACAGATTATAGGACT
TTTGTGGGTACAAACTTGAATCCTTTGTGGGAGAAGTTTCTGGTTCCATC
AGAAGATGATGTGATCCAATGTCAGCACACTGCAAGTCCCTTGGGTAATG
GTGCAGTGGTAGAGACATCTGACAAGAAAATACTCTTGTTGCAAAGAAGT
AATAATGTTGGCGAATTTCCTGGGCACTTTGTCTTTCCAGGAGGCCATCC
AGAGCCCCAAGATGCTGGAATTACATCTCATCCGTGTGGGTCAACAGACT
CTGAGTTTATAAACACAANGTTTCTCAAGAAATGTTTGACAGCATTACTC
GCGAAGTGGTTGAAGAAATTGGAGTACCTTCAGAATCTCTTCCATTGAAT
TTTCTCCAGTGCACCCACTTTTCATTGGTATATCCCGCAGGCGTTTGGAT
GTTAAACAGCTGCTTTTTTCTTCATAAATGCAGTCTTCAGTCCACCGAAA
TCAACAGTTGTATTCTTCCGCACAAGATGGCTATGATCAAACCCACTTTT
TTGAGTT
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