EY702625

Overview
NameEY702625
Unique NameEY702625
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length426
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2603 contig Csv1_Contig2603:889..1312. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY702625 vs. ExPASy Swiss-Prot
Match: AAT5_ARATH (Aspartate aminotransferase, chloroplastic OS=Arabidopsis thaliana GN=ASP5 PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 1.385e-20
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 2 
Query:   53 NKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS 193
            NKAQSDNMT+KWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS
Sbjct:  407 NKAQSDNMTDKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS 453
[Close]
BLAST of EY702625 vs. ExPASy Swiss-Prot
Match: AATM_LUPAN (Aspartate aminotransferase P2, mitochondrial (Fragment) OS=Lupinus angustifolius PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.457e-19
Identity = 44/47 (93.62%), Postives = 45/47 (95.74%), Query Frame = 2 
Query:   53 NKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS 193
            NK QSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDS+H VS
Sbjct:  408 NKNQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSFHYVS 454
The following BLAST results are available for this feature:
BLAST of EY702625 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
AAT5_ARATH1.385e-2097.87Aspartate aminotransferase, chloroplastic OS=Arabi... [more]
AATM_LUPAN4.457e-1993.62Aspartate aminotransferase P2, mitochondrial (Frag... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-010-C05-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702625 ID=EY702625; Name=EY702625; organism=Citrus sinensis; type=EST; length=426bp
CCGGTCCGGAATTCCTCTCCCGACCCACGCGTCCGCTCATTCACAGTCTC
CGAACAAAGCGCAGAGTGATAATATGACAAATAAGTGGCATGTCTACATG
ACCAAGGATGGGAGGATATCCTTGGCTGGATTGTCTTTGGCCAAATGTGA
ATATCTTGCCGATGCCATCATTGATTCATATCACAATGTCAGTTGAAGTT
GTTGGACCACTAGACAGATATTCACATTAGAAATCAGACCATTAAAATGT
TGGGGAGTCCAAATTGATTATTATTTACTCCAATGCTTACAAGTTCCAAT
GGTCAAGTTTTGATTGAGCAGTGTTATATGTACGTATTTCCGGAAGATTT
AATATAGCTTTTGGAATTTGAAAGATATTTTTATATAGATTATTGGTGGC
ATTGATTTAAAAAAAAAAAAAAAAAA
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