EY702617

Overview
NameEY702617
Unique NameEY702617
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length558
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9466 contig Csv1_Contig9466:449..1006. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702617 vs. ExPASy Swiss-Prot
Match: ARF2_ORYSJ (ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica GN=ARF PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.204e-18
Identity = 45/48 (93.75%), Postives = 45/48 (93.75%), Query Frame = 1
Query:   16 MNAAEITDKLGLHSLRLFHRYIQSTCATSGEGLYEGLDWLSNNIANKA 159
            MNAAEITDKLGLHSLR  H YIQSTCATSGEGLYEGLDWLSNNIANKA
Sbjct:  134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 181          
BLAST of EY702617 vs. ExPASy Swiss-Prot
Match: ARF1_ORYSJ (ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica GN=Os01g0813400 PE=2 SV=3)

HSP 1 Score: 90.8929 bits (224), Expect = 4.575e-18
Identity = 44/48 (91.67%), Postives = 45/48 (93.75%), Query Frame = 1
Query:   16 MNAAEITDKLGLHSLRLFHRYIQSTCATSGEGLYEGLDWLSNNIANKA 159
            MNAAEITDKLGLHSLR  H YIQSTCATSGEGLYEGLDWLSNNIA+KA
Sbjct:  134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181          
BLAST of EY702617 vs. ExPASy Swiss-Prot
Match: ARF1_ARATH (ADP-ribosylation factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 4.575e-18
Identity = 44/48 (91.67%), Postives = 45/48 (93.75%), Query Frame = 1
Query:   16 MNAAEITDKLGLHSLRLFHRYIQSTCATSGEGLYEGLDWLSNNIANKA 159
            MNAAEITDKLGLHSLR  H YIQSTCATSGEGLYEGLDWLSNNIA+KA
Sbjct:  134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181          
BLAST of EY702617 vs. ExPASy Swiss-Prot
Match: ARF2_ARATH (ADP-ribosylation factor 2 OS=Arabidopsis thaliana GN=ARF2-A PE=2 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 5.975e-18
Identity = 44/48 (91.67%), Postives = 44/48 (91.67%), Query Frame = 1
Query:   16 MNAAEITDKLGLHSLRLFHRYIQSTCATSGEGLYEGLDWLSNNIANKA 159
            MNAAEITDKLGLHSLR  H YIQSTCATSGEGLYEGLDWLSNNIA KA
Sbjct:  134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAGKA 181          
BLAST of EY702617 vs. ExPASy Swiss-Prot
Match: ARF1_CHLRE (ADP-ribosylation factor 1 OS=Chlamydomonas reinhardtii GN=ARF1 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 5.975e-18
Identity = 43/47 (91.49%), Postives = 44/47 (93.62%), Query Frame = 1
Query:   16 MNAAEITDKLGLHSLRLFHRYIQSTCATSGEGLYEGLDWLSNNIANK 156
            MNAAEITDKLGLHSLR  H YIQSTCATSGEGLYEGLDWLSNN+ANK
Sbjct:  134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNLANK 180          
BLAST of EY702617 vs. ExPASy Swiss-Prot
Match: ARF1_CATRO (ADP-ribosylation factor 1 OS=Catharanthus roseus GN=ARF1 PE=2 SV=3)

HSP 1 Score: 90.1225 bits (222), Expect = 7.803e-18
Identity = 44/48 (91.67%), Postives = 44/48 (91.67%), Query Frame = 1
Query:   16 MNAAEITDKLGLHSLRLFHRYIQSTCATSGEGLYEGLDWLSNNIANKA 159
            MNAAEITDK GLHSLR  H YIQSTCATSGEGLYEGLDWLSNNIANKA
Sbjct:  134 MNAAEITDKHGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 181          
BLAST of EY702617 vs. ExPASy Swiss-Prot
Match: ARF1_SALBA (ADP-ribosylation factor 1 OS=Salix bakko GN=ARF1 PE=2 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 1.019e-17
Identity = 43/48 (89.58%), Postives = 45/48 (93.75%), Query Frame = 1
Query:   16 MNAAEITDKLGLHSLRLFHRYIQSTCATSGEGLYEGLDWLSNNIANKA 159
            MNAAEITDKLGLHSLR  H YIQSTCATSGEGLYEGLDWLSNNI++KA
Sbjct:  134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNISSKA 181          
BLAST of EY702617 vs. ExPASy Swiss-Prot
Match: ARF_VIGUN (ADP-ribosylation factor OS=Vigna unguiculata GN=ARF PE=2 SV=3)

HSP 1 Score: 89.3521 bits (220), Expect = 1.331e-17
Identity = 43/48 (89.58%), Postives = 45/48 (93.75%), Query Frame = 1
Query:   16 MNAAEITDKLGLHSLRLFHRYIQSTCATSGEGLYEGLDWLSNNIANKA 159
            MNAAEITDKLGLHSLR  H YIQSTCATSGEGLYEGL+WLSNNIA+KA
Sbjct:  134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLEWLSNNIASKA 181          
BLAST of EY702617 vs. ExPASy Swiss-Prot
Match: ARF1_DAUCA (ADP-ribosylation factor 1 OS=Daucus carota GN=ARF1 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 5.058e-17
Identity = 42/48 (87.50%), Postives = 44/48 (91.67%), Query Frame = 1
Query:   16 MNAAEITDKLGLHSLRLFHRYIQSTCATSGEGLYEGLDWLSNNIANKA 159
            MNAAEI DKLGLHSLR  H YIQSTCATSGEGLYEGLDWLSNNIA+K+
Sbjct:  134 MNAAEIIDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKS 181          
BLAST of EY702617 vs. ExPASy Swiss-Prot
Match: ARF1_SOLTU (ADP-ribosylation factor 1 OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 1.922e-16
Identity = 41/47 (87.23%), Postives = 42/47 (89.36%), Query Frame = 1
Query:   16 MNAAEITDKLGLHSLRLFHRYIQSTCATSGEGLYEGLDWLSNNIANK 156
            MNAAEITDKLGLHSLR  H YIQSTCATSGEGLYEGLDWLSN I N+
Sbjct:  134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNQIRNQ 180          
The following BLAST results are available for this feature:
BLAST of EY702617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
ARF2_ORYSJ1.204e-1893.75ADP-ribosylation factor 2 OS=Oryza sativa subsp. j... [more]
ARF1_ORYSJ4.575e-1891.67ADP-ribosylation factor 1 OS=Oryza sativa subsp. j... [more]
ARF1_ARATH4.575e-1891.67ADP-ribosylation factor 1 OS=Arabidopsis thaliana ... [more]
ARF2_ARATH5.975e-1891.67ADP-ribosylation factor 2 OS=Arabidopsis thaliana ... [more]
ARF1_CHLRE5.975e-1891.49ADP-ribosylation factor 1 OS=Chlamydomonas reinhar... [more]
ARF1_CATRO7.803e-1891.67ADP-ribosylation factor 1 OS=Catharanthus roseus G... [more]
ARF1_SALBA1.019e-1789.58ADP-ribosylation factor 1 OS=Salix bakko GN=ARF1 P... [more]
ARF_VIGUN1.331e-1789.58ADP-ribosylation factor OS=Vigna unguiculata GN=AR... [more]
ARF1_DAUCA5.058e-1787.50ADP-ribosylation factor 1 OS=Daucus carota GN=ARF1... [more]
ARF1_SOLTU1.922e-1687.23ADP-ribosylation factor 1 OS=Solanum tuberosum PE=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-010-B07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702617 ID=EY702617; Name=EY702617; organism=Citrus sinensis; type=EST; length=558bp
AGATCTTCCATACCCATGAATGCTGCAGAGATCACTGATAAGCTTGGTCT
TCACTCACTTCGTCTTTTCCACCGGTACATCCAGAGCACATGTGCAACAT
CTGGGGAAGGACTCTATGAGGGTCTGGACTGGCTCTCCAACAACATCGCT
AACAAGGCTTAATTGATTGGTCAAGTCTGAGCGACTCTTTGCGGCAGCAT
CTATGTGAATGATGTTACTATGCTTTTGTTTATTTTGTCGGGGATTCTTT
TTGGGCTTTACTACCTACGTTCAGAAAAATGTATTTGTTTGTGTTAGATA
TTTGATTGGCACCATACTATAAAGTTTTCTGCATTGTCATTGTAGAGCTT
AAATTACCCTCATTATTCAGAATTCAATGATTTTTTGGCTGTTATACCTC
TTAGCTTCTCTTTAGTCTGCAGCGGTGCAGATATACTTTAATCACCAATA
ATTGGCTTATTGATTTGATCTTAATATTGTTCTCAATGTCAGTTTGTATG
TATCTTTTGATTACNGCAAACAGAACTCGAATATTACCTCCGTAATGACC
CTCTTTCA
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