EY702607

Overview
NameEY702607
Unique NameEY702607
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length699
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9723 contig Csv1_Contig9723:228..926. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702607 vs. ExPASy Swiss-Prot
Match: MYRS_QUEIL (Myrcene synthase, chloroplastic OS=Quercus ilex PE=1 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.249e-56
Identity = 110/188 (58.51%), Postives = 135/188 (71.81%), Query Frame = 2
Query:   65 SIFRDAIRFTTAYLKEWVAKHDIDKNDDEYLCTLVKHALELPLHWRMRRLEARWFIDVYESGPDMNPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDAVESHVLD----LPNKHAVAYYKTHD 616
            +I  +A  F+T +L+E+V +     N ++ L TLV H+LE PLHWRM RLEARWFI++Y    D+NPILLE A++D+NIVQA H  DLK VS WWK TGL E L+FARDR VENFFWTVG IF+PQFGYCRRM   V  L+T IDDVYDVYGTLDELELFTD VE   ++    LP+   + +   H+
Sbjct:  208 NILEEARDFSTKHLEEYVKQ-----NKEKNLATLVNHSLEFPLHWRMPRLEARWFINIYRHNQDVNPILLEFAELDFNIVQAAHQADLKQVSTWWKSTGLVENLSFARDRPVENFFWTVGLIFQPQFGYCRRMFTKVFALITTIDDVYDVYGTLDELELFTDVVERWDINAMDQLPDYMKICFLTLHN 390          
BLAST of EY702607 vs. ExPASy Swiss-Prot
Match: RLC1_CITLI ((R)-limonene synthase 1 OS=Citrus limon PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.081e-50
Identity = 96/181 (53.04%), Postives = 132/181 (72.93%), Query Frame = 2
Query:   65 SIFRDAIRFTTAYLKEWVAKHDIDKNDDEYLCTLVKHALELPLHWRMRRLEARWFIDVYESGPDMNPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDAVESHVLDLPNKHAVAYYK 607
            SI  +A +FT+ +LKE +   +++  +D ++    K ALELPLHW++  LEARWFI +YE   D N +LLELAK+++N +QAI+ E+LK +S WWK TGLGEKL+FAR+R+V +F W++G  FEPQF YCRR+  +   L+T+IDD+YDVYGTLDELE+FTDAVE   ++   KH   Y K
Sbjct:  200 SIMEEAWQFTSKHLKEVMISKNME--EDVFVAEQAKRALELPLHWKVPMLEARWFIHIYERREDKNHLLLELAKMEFNTLQAIYQEELKEISGWWKDTGLGEKLSFARNRLVASFLWSMGIAFEPQFAYCRRVLTISIALITVIDDIYDVYGTLDELEIFTDAVERWDINYALKHLPGYMK 378          
BLAST of EY702607 vs. ExPASy Swiss-Prot
Match: CINS_ARATH (1,8-cineole synthase, chloroplastic OS=Arabidopsis thaliana GN=TPS27 PE=1 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.367e-50
Identity = 94/161 (58.39%), Postives = 118/161 (73.29%), Query Frame = 2
Query:   89 FTTAYLKEWVAKHD---IDKNDDEYLCTLVKHALELPLHWRMRRLEARWFIDVYESGPDMNPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDAVES 562
            F T  ++++V   D   I+  +  Y      HALE+P HWRMRRL+ RW+ID YE   DMN +L+E AK+D+NIVQA H EDLKYVSRWWK T L  +L F RDR+VEN+FWTVG I+EPQFGY RR+  +VN L+T IDD+YD+YGTL+ELELFT  VE+
Sbjct:  209 FATEQIRKFVDDEDTKNIEVREKAY------HALEMPYHWRMRRLDTRWYIDAYEKKHDMNLVLIEFAKIDFNIVQAAHQEDLKYVSRWWKDTCLTNQLPFVRDRIVENYFWTVGLIYEPQFGYIRRIMTIVNALVTTIDDIYDIYGTLEELELFTSMVEN 363          
BLAST of EY702607 vs. ExPASy Swiss-Prot
Match: MYRS2_ARATH (Myrcene/ocimene synthase 2, chloroplastic OS=Arabidopsis thaliana GN=TPS24 PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 7.749e-49
Identity = 89/147 (60.54%), Postives = 112/147 (76.19%), Query Frame = 2
Query:  131 IDKNDDEY---LCTLVKHALELPLHWRMRRLEARWFIDVYESGPDMNPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDAVES 562
            +D   + Y   L  +  HALE+P HWRMRRLE RW+ID YE   DMN  L E AK+D+NIVQ  H ED+KYVS WWK+TGLG +L+F RDR+VEN+FWTVG I+EPQFGY RR+ A+V  L+T+IDD+YD+YGT +ELELFT  V++
Sbjct:  219 VDDESETYNIMLREMAIHALEIPYHWRMRRLETRWYIDAYEKKHDMNLFLAEFAKIDFNIVQTAHQEDVKYVSCWWKETGLGSQLHFVRDRIVENYFWTVGMIYEPQFGYIRRIVAIVAALITVIDDIYDIYGTPEELELFTAMVQN 365          
BLAST of EY702607 vs. ExPASy Swiss-Prot
Match: TPS2_CANSA ((+)-alpha-pinene synthase, chloroplastic OS=Cannabis sativa PE=1 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.701e-46
Identity = 92/166 (55.42%), Postives = 122/166 (73.49%), Query Frame = 2
Query:   65 SIFRDAIRFTTAYLKEWVAKHDIDKNDDEYLCTLVKHALELPLHWRMRRLEARWFIDVYESGPDMNPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGE-KLNFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDAVE 559
            +I  +A  FTT YLK +V   D +   ++ +  LV+HALE+PLHWR  R EA+WFI+ YE   D N  LLE AK+D+N++Q+I  EDLK+VSRWW+ + LG+ K+ +ARDR+VE F W VG  FEPQF + RR+SA +  L+T+IDD+YDVYGTL+ELELFT AVE
Sbjct:  222 NILEEARVFTTEYLKRYVMMIDQNIILNDNMAILVRHALEMPLHWRTIRAEAKWFIEEYEKTQDKNGTLLEFAKLDFNMLQSIFQEDLKHVSRWWEHSELGKNKMVYARDRLVEAFLWQVGVRFEPQFSHFRRISARIYALITIIDDIYDVYGTLEELELFTKAVE 387          
BLAST of EY702607 vs. ExPASy Swiss-Prot
Match: TPS1_CANSA ((-)-limonene synthase, chloroplastic OS=Cannabis sativa GN=TPS1 PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.198e-45
Identity = 93/194 (47.94%), Postives = 131/194 (67.53%), Query Frame = 2
Query:   65 SIFRDAIRFTTAYLKEWVAKHDIDKNDDEYLCTLVKHALELPLHWRMRRLEARWFID-VYESGPDMNPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDAVESHVL----DLPNKHAVAYYKTHDCGHQI 631
            SI  +A  FTT  LK++      + N+   +  LV HALE+PL WR+ R EA+WFI+ +YE   DMNP LLE AK+D+N++Q+ + E+LK +SRWWK + LGEKL F RDR+VE F W VG  FEPQF Y R M   +  LLT+IDD++D+YGTL+EL+LFT+A++   L     LP+    A+Y T++  +++
Sbjct:  228 SILEEARIFTTKCLKKYKLMSSSNNNNMTLISLLVNHALEMPLQWRITRSEAKWFIEEIYERKQDMNPTLLEFAKLDFNMLQSTYQEELKVLSRWWKDSKLGEKLPFVRDRLVECFLWQVGVRFEPQFSYFRIMDTKLYVLLTIIDDMHDIYGTLEELQLFTNALQRWDLKELDKLPDYMKTAFYFTYNFTNEL 421          
BLAST of EY702607 vs. ExPASy Swiss-Prot
Match: MYRS1_ARATH (Myrcene/ocimene synthase 1, chloroplastic OS=Arabidopsis thaliana GN=TPS10 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.975e-44
Identity = 86/162 (53.09%), Postives = 118/162 (72.84%), Query Frame = 2
Query:   89 FTTAYLKEWVAKHDIDKNDDEYLCTLVK---HALELPLHWRMRRLEARWFIDVYESGPDM-NPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDAVES 562
            F T  L+++V  H    N+D   C +V+    AL++P +W+MRRL  RW+IDVY    +  N +++E AK+D+NIVQAIH E+LK VS WW +TGLG++L FARDR+VEN+FWT+G I EPQ+GY R+    +N LLT IDD+YD+YGTL+EL+LFT A E+
Sbjct:  202 FATQQLRDFVDTHS---NEDFGSCDMVEIVVQALDMPYYWQMRRLSTRWYIDVYGKRQNYKNLVVVEFAKIDFNIVQAIHQEELKNVSSWWMETGLGKQLYFARDRIVENYFWTIGQIQEPQYGYVRQTMTKINALLTTIDDIYDIYGTLEELQLFTVAFEN 360          
BLAST of EY702607 vs. ExPASy Swiss-Prot
Match: BPPS_SALOF ((+)-bornyl diphosphate synthase, chloroplastic OS=Salvia officinalis PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.975e-44
Identity = 89/175 (50.86%), Postives = 120/175 (68.57%), Query Frame = 2
Query:  146 DEYLCTLVKHALELPLHWRMRRLEARWFIDVYESGPDMNPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEP-QFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDAVE----SHVLDLPNKHAVAYYKTH----DCGHQIVPPH 643
            DE L   ++H+L+LPLHWR++ +EARWFID Y   PDMNP++ ELAK+++NI+QA H ++LK +SRWW +    EKL F RDR+VE+FFW VG +FEP Q GY R+M+A +  L T+IDD+YDVYGTLDELELFTD  +      +  LP    + Y+  H    D  + I+  H
Sbjct:  234 DENLLLWIRHSLDLPLHWRIQSVEARWFIDAYARRPDMNPLIFELAKLNFNIIQATHQQELKDLSRWWSRLCFPEKLPFVRDRLVESFFWAVG-MFEPHQHGYQRKMAATIIVLATVIDDIYDVYGTLDELELFTDTFKRWDTESITRLPYYMQLCYWGVHNYISDAAYDILKEH 407          
BLAST of EY702607 vs. ExPASy Swiss-Prot
Match: OCIS_ARATH ((E)-beta-ocimene synthase, chloroplastic OS=Arabidopsis thaliana GN=TPS03 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.400e-44
Identity = 93/206 (45.15%), Postives = 137/206 (66.50%), Query Frame = 2
Query:   74 RDAIRFTTAYLKEWVAKHDIDKNDDEY--LCTLVKHALELPLHWRMRRLEARWFIDVYESGPDMNPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDAVE----SHVLDLPNK------------HAVAYYKTHDCGHQIVP 637
            +++I +TT  L+++V   +++KN+ +   L  +V HALE+P H R+ RLEARW+I+VY    DMNPILLELAK+D+N VQAIH ++LK +S WW KTGL + L+F RDR+ E +F +VG ++EP+F Y R+M   V  L+T IDD+YD+YGTL+EL+LFT  VE    + + +LPN             + + Y+   D G  ++P
Sbjct:  180 KESIYYTTKRLRKFV---EVNKNETKSYTLRRMVIHALEMPYHRRVGRLEARWYIEVYGERHDMNPILLELAKLDFNFVQAIHQDELKSLSSWWSKTGLTKHLDFVRDRITEGYFSSVGVMYEPEFAYHRQMLTKVFMLITTIDDIYDIYGTLEELQLFTTIVEKWDVNRLEELPNYMKLCFLCLVNEINQIGYFVLRDKGFNVIP 382          
BLAST of EY702607 vs. ExPASy Swiss-Prot
Match: TPS02_ARATH (Probable terpenoid synthase 2, chloroplastic OS=Arabidopsis thaliana GN=TPS02 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.299e-43
Identity = 83/166 (50.00%), Postives = 120/166 (72.29%), Query Frame = 2
Query:  104 LKEWVAKHD--IDKNDDEYLCTLVKHALELPLHWRMRRLEARWFIDVYESGPDMNPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDAVE----SHVLDLPN 583
            L E+VA+    I + D+ Y+  +VK ALE P HW +RRLEARW+I+VYE   +MNP+LLE A +D+N++QA H E+LK +S     TGL ++L+F RDR+ E++FWT+G  +EP+F YCR++   +  L+ ++DD+YD+YGTL+ELELFT+ VE    +HV  LPN
Sbjct:  221 LSEFVAESSKTICREDETYILEMVKRALETPYHWSIRRLEARWYINVYEKKHEMNPLLLEFAAIDFNMLQANHQEELKLIS----STGLMKQLDFVRDRITESYFWTIGIFYEPEFKYCRKILTKIFMLIVIMDDIYDIYGTLEELELFTNVVEKWDVNHVERLPN 382          
The following BLAST results are available for this feature:
BLAST of EY702607 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
MYRS_QUEIL2.249e-5658.51Myrcene synthase, chloroplastic OS=Quercus ilex PE... [more]
RLC1_CITLI1.081e-5053.04(R)-limonene synthase 1 OS=Citrus limon PE=2 SV=1[more]
CINS_ARATH5.367e-5058.391,8-cineole synthase, chloroplastic OS=Arabidopsis... [more]
MYRS2_ARATH7.749e-4960.54Myrcene/ocimene synthase 2, chloroplastic OS=Arabi... [more]
TPS2_CANSA4.701e-4655.42(+)-alpha-pinene synthase, chloroplastic OS=Cannab... [more]
TPS1_CANSA5.198e-4547.94(-)-limonene synthase, chloroplastic OS=Cannabis s... [more]
MYRS1_ARATH1.975e-4453.09Myrcene/ocimene synthase 1, chloroplastic OS=Arabi... [more]
BPPS_SALOF1.975e-4450.86(+)-bornyl diphosphate synthase, chloroplastic OS=... [more]
OCIS_ARATH4.400e-4445.15(E)-beta-ocimene synthase, chloroplastic OS=Arabid... [more]
TPS02_ARATH8.299e-4350.00Probable terpenoid synthase 2, chloroplastic OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-010-A08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702607 ID=EY702607; Name=EY702607; organism=Citrus sinensis; type=EST; length=699bp
CCACGCGTCCGAAGGAATGTTAGCTCTGTATGAAGCTGCATACCTCCTGG
TAGAAGAAGAAAGCAGTATCTTTCGTGACGCTATAAGGTTCACCACCGCA
TATCTCAAAGAATGGGTGGCCAAGCATGATATTGACAAAAATGATGATGA
ATATCTTTGTACATTAGTGAAACATGCTTTGGAACTTCCACTACATTGGA
GGATGCGAAGATTGGAGGCAAGGTGGTTCATCGATGTATACGAAAGTGGA
CCAGACATGAACCCTATCTTGCTCGAGCTTGCTAAAGTTGACTATAATAT
TGTGCAAGCAATACACTAAGAGGATCTCAAATATGTGTCAAGGTGGTGGA
AGAAAACAGGACTTGGGGAGAAGTTGAATTTTGCAAGAGACAGAGTAGTG
GAGAATTTCTTCTGGACCGTGGGGGATATATTCGAACCTCAGTTTGGATA
TTGTAGAAGGATGTCTGCAATGGTTAATTGCCTTTTAACATTAATCGATG
ATGTTTATGATGTCTATGGGACCTTGGACGAACTTGAGCTATTCACTGAT
GCAGTTGAGAGTCATGTACTAGATCTCCCAAATAAACATGCAGTTGCGTA
CTATAAGACTCATGACTGTGGTCACCAAATCGTTCCTCCTCATAAATAAT
AAATATTATTTTAGTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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