EY702599

Overview
NameEY702599
Unique NameEY702599
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702599 vs. ExPASy Swiss-Prot
Match: RL6_MESCR (60S ribosomal protein L6 OS=Mesembryanthemum crystallinum GN=RPL6 PE=2 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.750e-81
Identity = 152/227 (66.96%), Postives = 171/227 (75.33%), Query Frame = 3
Query:   48 APKQGKPRVSRNPELIRGIGKFSRARMDHKRGLWAIKAKNGGVFPRHDXXXXXXXXXXXXXXFYPADDVKKPLVNKRKPKPTKLRASITPGTVLIILAGRVKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDKFDDKYFATEVERKKNKGQNXXXXXXXXXXXXXXXXXXDDQKSCDAPLIQGLEAVPHLRGYLGARVFPRAGMKP 728
            A KQ KP VSRNPEL+RGIGK+SR++M HKRGLWAIKAKNGGVFP+H               FYPADDVKKPL+NKRKPKPTKLRASITPGTVLIILAGR KGKRVVFLKQL SGLLLV+GPFK+NGVPLRRVNQ+YVI TSTKVDISGVNV+KFDDKYF  + E+K  KG+                   DDQK+ D  L++ +E VP L+ YLGAR   +AGMKP
Sbjct:    3 AAKQRKPHVSRNPELVRGIGKYSRSKMYHKRGLWAIKAKNGGVFPKHAPKSADSKAVEKPPKFYPADDVKKPLINKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGPFKVNGVPLRRVNQAYVIATSTKVDISGVNVEKFDDKYFGKKAEKKNKKGEGEFFEAEKKEVNVLPQEKKDDQKAVDVALLKAIEGVPELKAYLGARFSLKAGMKP 229          
BLAST of EY702599 vs. ExPASy Swiss-Prot
Match: RL63_ARATH (60S ribosomal protein L6-3 OS=Arabidopsis thaliana GN=RPL6C PE=1 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 2.365e-78
Identity = 150/228 (65.79%), Postives = 169/228 (74.12%), Query Frame = 3
Query:   45 MAPKQGKPRVSRNPELIRGIGKFSRARMDHKRGLWAIKAKNGGVFPRHDXXXXXXXXXXXXXXFYPADDVKKPLVNKRKPKPTKLRASITPGTVLIILAGRVKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDKFDDKYFATEVERKKNKGQNXXXXXXXXXXXXXXXXXXDDQKSCDAPLIQGLEAVPHLRGYLGARVFPRAGMKP 728
            M  KQ  P+V+RNP+LIRG+GK+SR++M HKRGLWAIKAKNGGVFPRHD              FYPA+DVKKPL N+R  KPTKLRASITPGTVLIILAGR KGKRVVFLKQL SGLLLV+GPFKINGVPLRRVNQ+YVIGTSTKVDISGV +DKFDDKYF    E+KK K +                   DDQK+ DA LI+ +EAVP L+ YLGAR   + GMKP
Sbjct:    1 MPAKQRTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFYPAEDVKKPLPNRRTAKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFKINGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKKEIPQVKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKP 228          
BLAST of EY702599 vs. ExPASy Swiss-Prot
Match: RL61_ARATH (60S ribosomal protein L6-1 OS=Arabidopsis thaliana GN=RPL6A PE=2 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 3.088e-78
Identity = 147/221 (66.52%), Postives = 168/221 (76.02%), Query Frame = 3
Query:   66 PRVSRNPELIRGIGKFSRARMDHKRGLWAIKAKNGGVFPRHDXXXXXXXXXXXXXXFYPADDVKKPLVNKRKPKPTKLRASITPGTVLIILAGRVKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDKFDDKYFATEVERKKNKGQNXXXXXXXXXXXXXXXXXXDDQKSCDAPLIQGLEAVPHLRGYLGARVFPRAGMKP 728
            P+V+RNP+LIRG+GK+SR++M HKRGLWAIKAKNGGVFPRHD              FYPA+DVKKPLVN+RKPKPTKL+ASITPGTVLIILAGR KGKRVVFLKQL SGLLLV+GPFKINGVPLRRVNQ+YVIGTSTK+DISGVN +KFDDKYF    E+KK K +                   +DQK+ DA LI+ +EAVP L+ YLGAR     GMKP
Sbjct:    8 PKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKVDAPVEKPAKFYPAEDVKKPLVNRRKPKPTKLKASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGPFKINGVPLRRVNQAYVIGTSTKIDISGVNTEKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKKEIPQEKKEDQKTVDAALIKSIEAVPELKVYLGARFSLSQGMKP 228          
BLAST of EY702599 vs. ExPASy Swiss-Prot
Match: RL62_ARATH (60S ribosomal protein L6-2 OS=Arabidopsis thaliana GN=RPL6B PE=2 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 7.607e-77
Identity = 148/228 (64.91%), Postives = 167/228 (73.25%), Query Frame = 3
Query:   45 MAPKQGKPRVSRNPELIRGIGKFSRARMDHKRGLWAIKAKNGGVFPRHDXXXXXXXXXXXXXXFYPADDVKKPLVNKRKPKPTKLRASITPGTVLIILAGRVKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDKFDDKYFATEVERKKNKGQNXXXXXXXXXXXXXXXXXXDDQKSCDAPLIQGLEAVPHLRGYLGARVFPRAGMKP 728
            M  KQ   +V+RNP+LIRG+GK+SR++M HKRGLWAIKAKNGGVFPRHD              FYPA+DVKKPL N+R  KP KLRASITPGTVLIILAGR KGKRVVFLKQL SGLLLV+GPFKINGVPLRRVNQ+YVIGTSTKVDISGV +DKFDDKYF    E+KK K +                   DDQK+ DA LI+ +EAVP L+ YLGAR   + GMKP
Sbjct:    1 MPAKQRTAKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFYPAEDVKKPLPNRRTAKPAKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFKINGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKKEIPQGKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKP 228          
BLAST of EY702599 vs. ExPASy Swiss-Prot
Match: RL6_CHILA (60S ribosomal protein L6 OS=Chinchilla lanigera GN=RPL6 PE=2 SV=3)

HSP 1 Score: 151.369 bits (381), Expect = 6.514e-36
Identity = 101/256 (39.45%), Postives = 135/256 (52.73%), Query Frame = 3
Query:   21 AQQKRVASMAPKQGKPRVSRNPELIRGIGKFSRARMDHKRGLWAIKA--------------------------KNGGVFPRHDXXXXXXXXXXXXXXFYPADDVKKPLVNKRKPKP-----TKLRASITPGTVLIILAGRVKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDK-FDDKYFATEVERKKNKGQNXXXXXXXXXXXXXXXXXXDDQKSCDAPLIQGLEAVPHLRGYL 692
            A++  V +   K+G+P  SRNP L+RGIG++SR+ M  ++ L+  K                           KNGG                    +YP +DV + L++  K KP      KLRASITPGTVLIIL GR +GKRVVFLKQL SGLLLV+GP  +N VPLRR +Q +VI TSTK+DIS V + K   D YF  + + +K + Q                    DQK+ D+ ++  ++AVP LRGYL
Sbjct:   27 AKKANVKAKKSKKGQPHCSRNPVLVRGIGRYSRSAMYSRKALYKRKYTAAKSKVEKKKKEKVLATVTKPVGGDKNGGT---------RVVKLRKMPRYYPTEDVPRKLLSHGK-KPFSQHVRKLRASITPGTVLIILTGRHRGKRVVFLKQLASGLLLVTGPLNLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFKKK-KLRKPRHQEGEIFDTEKERYQISEQRKVDQKAVDSQILPKIKAVPQLRGYL 271          
BLAST of EY702599 vs. ExPASy Swiss-Prot
Match: RL6_PIG (60S ribosomal protein L6 OS=Sus scrofa GN=RPL6 PE=2 SV=3)

HSP 1 Score: 150.214 bits (378), Expect = 1.451e-35
Identity = 97/245 (39.59%), Postives = 132/245 (53.88%), Query Frame = 3
Query:   54 KQGKPRVSRNPELIRGIGKFSRARMDHKRGLWAIKA--------------------------KNGGVFPRHDXXXXXXXXXXXXXXFYPADDVKKPLVNKRKPKP-----TKLRASITPGTVLIILAGRVKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTKVDISGVNV-DKFDDKYFATEVERKKNKGQNXXXXXXXXXXXXXXXXXXDDQKSCDAPLIQGLEAVPHLRGYL 692
            K+GKP  SRNP L+RGIG++SR+ M  ++ L+  K                           KNGG                    +YP +DV + L++  K KP      KLRASITPGT+LIIL GR +GKRV+FLKQL SGLLLV+GP  +N VPLRR +Q +VI TSTK+DISGV + +   D YF  + + +K + Q                    DQK+ D+ +++ ++AVP L+GYL
Sbjct:   34 KKGKPHCSRNPVLVRGIGRYSRSAMYSRKALYKRKYSAAKSKVEKKKKVRVLATVTKPVGGDKNGGT---------RVVKLRKMPRYYPTEDVPRKLLSHGK-KPFSKHVRKLRASITPGTILIILTGRHRGKRVIFLKQLSSGLLLVTGPLSLNRVPLRRTHQKFVIATSTKIDISGVKIPEHLTDAYFKKK-KLRKPRHQEGEIFDTEKEKYEISEQRKVDQKAVDSQILRRIKAVPQLQGYL 267          
BLAST of EY702599 vs. ExPASy Swiss-Prot
Match: RL6_BOVIN (60S ribosomal protein L6 OS=Bos taurus GN=RPL6 PE=2 SV=3)

HSP 1 Score: 150.214 bits (378), Expect = 1.451e-35
Identity = 98/245 (40.00%), Postives = 132/245 (53.88%), Query Frame = 3
Query:   54 KQGKPRVSRNPELIRGIGKFSRARMDHKRGLWAIKA--------------------------KNGGVFPRHDXXXXXXXXXXXXXXFYPADDVKKPLVNKRKPKP-----TKLRASITPGTVLIILAGRVKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTKVDISGVNV-DKFDDKYFATEVERKKNKGQNXXXXXXXXXXXXXXXXXXDDQKSCDAPLIQGLEAVPHLRGYL 692
            K+GKP  SRNP L+RGIG++SR+ M  ++ L+  K                           KNGG                    +YP +DV + L++  K KP      KLRASITPGT+LIIL GR +GKRVVFLKQL SGLLLV+GP  +N VPLRR +Q +VI TSTK+DISGV + +   D YF  + + +K + Q                    DQK+ D+ +++ ++AVP L+GYL
Sbjct:   37 KKGKPHCSRNPVLVRGIGRYSRSAMYSRKALYKRKYSAAKSKVEKKKKVRVLATVTKPVGGDKNGGT---------RVVKLRKMPRYYPTEDVPRKLLSHGK-KPFSKHVRKLRASITPGTILIILTGRHRGKRVVFLKQLGSGLLLVTGPLSLNRVPLRRTHQKFVIATSTKIDISGVKIPEHLTDTYFKKK-KLRKPRHQEGEIFDTEREKYEITEQRKVDQKAVDSQILRRIKAVPQLQGYL 270          
BLAST of EY702599 vs. ExPASy Swiss-Prot
Match: RL6_MOUSE (60S ribosomal protein L6 OS=Mus musculus GN=Rpl6 PE=1 SV=3)

HSP 1 Score: 149.443 bits (376), Expect = 2.475e-35
Identity = 102/259 (39.38%), Postives = 134/259 (51.74%), Query Frame = 3
Query:   51 PKQGKPRVSRNPELIRGIGKFSRARMDHKRGLWAIKA---------------------------KNGGVFPRHDXXXXXXXXXXXXXXFYPADDVKKPLVNKRKPKP-----TKLRASITPGTVLIILAGRVKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDK-FDDKYFATEVERKKNKGQNXXXXXXXXXXXXXXXXXXDDQKSCDAPLIQGLEAVPHLRGYLGARVFPRAGMKP 728
            PK+ KP  SRNP L+RGIG++SR+ M  ++ L+  K                            KNGG                    +YP +DV + L++  K KP      +LR+SITPGTVLIIL GR +GKRVVFLKQL SGLLLV+GP  IN VPLRR +Q +VI TSTKVDIS V + K   D YF  + + +K + Q                    DQK+ D  ++  ++AVP L+GYL ++     GM P
Sbjct:   44 PKKAKPHCSRNPVLVRGIGRYSRSAMYSRKALYKRKYSAAKTKVEKKKKKEKVLATVTKTVGGDKNGGT---------RVVKLRKMPRYYPTEDVPRKLLSHGK-KPFSQHVRRLRSSITPGTVLIILTGRHRGKRVVFLKQLDSGLLLVTGPLVINRVPLRRTHQKFVIATSTKVDISDVKIPKHLTDAYFKKK-QLRKPRHQEGEIFDTEKEKYEITEQRKADQKAVDLQILPKIKAVPQLQGYLRSQFSLTNGMYP 291          
BLAST of EY702599 vs. ExPASy Swiss-Prot
Match: RL6_HUMAN (60S ribosomal protein L6 OS=Homo sapiens GN=RPL6 PE=1 SV=3)

HSP 1 Score: 149.443 bits (376), Expect = 2.475e-35
Identity = 97/246 (39.43%), Postives = 131/246 (53.25%), Query Frame = 3
Query:   51 PKQGKPRVSRNPELIRGIGKFSRARMDHKRGLWAIKA--------------------------KNGGVFPRHDXXXXXXXXXXXXXXFYPADDVKKPLVNKRKPKP-----TKLRASITPGTVLIILAGRVKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDK-FDDKYFATEVERKKNKGQNXXXXXXXXXXXXXXXXXXDDQKSCDAPLIQGLEAVPHLRGYL 692
            PK+GKP  SRNP L+RGIG++SR+ M  ++ ++  K                           KNGG                    +YP +DV + L++  K KP      KLRASITPGT+LIIL GR +GKRVVFLKQL SGLLLV+GP  +N VPLRR +Q +VI TSTK+DIS V + K   D YF  + + +K + Q                    DQK+ D+ ++  ++A+P L+GYL
Sbjct:   37 PKKGKPHCSRNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGT---------RVVKLRKMPRYYPTEDVPRKLLSHGK-KPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFKKK-KLRKPRHQEGEIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQLQGYL 271          
BLAST of EY702599 vs. ExPASy Swiss-Prot
Match: RL6_RAT (60S ribosomal protein L6 OS=Rattus norvegicus GN=Rpl6 PE=1 SV=5)

HSP 1 Score: 145.591 bits (366), Expect = 3.575e-34
Identity = 104/268 (38.81%), Postives = 138/268 (51.49%), Query Frame = 3
Query:   30 KRVASMAPK--QGKPRVSRNPELIRGIGKFSRARMDHKRGLWAIKA---------------------------KNGGVFPRHDXXXXXXXXXXXXXXFYPADDVKKPLVNKRKPKP-----TKLRASITPGTVLIILAGRVKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDK-FDDKYFATEVERKKNKGQNXXXXXXXXXXXXXXXXXXDDQKSCDAPLIQGLEAVPHLRGYLGARVFPRAGMKP 728
            K+ +S A K  + KP  SRNP L+RGIG++SR+ M  ++ L+  K                            KNGG                    +YP +DV + L++  K KP      +LR+SITPGTVLIIL GR +GKRVVFLKQL SGLLLV+GP  +N VPLRR +Q +VI TSTKVDIS V + K   D YF  +  RK  + Q                    DQK+ D+ ++  ++AVP L+GYL ++     GM P
Sbjct:   37 KKSSSKAKKLRKSKPHCSRNPVLVRGIGRYSRSAMYSRKALYKRKYSAAKTKVEKKKKKEKVLATVTKTVGGDKNGGT---------RVVKLRKMPRYYPTEDVPRKLLSHGK-KPFSQHVRRLRSSITPGTVLIILTGRHRGKRVVFLKQLGSGLLLVTGPLALNRVPLRRTHQKFVIATSTKVDISKVKIPKHLTDAYFKKKPLRKP-RHQEGEIFDTEKEKYEITEQRKADQKAVDSQILPKIKAVPQLQGYLRSQFSLTNGMYP 293          
The following BLAST results are available for this feature:
BLAST of EY702599 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
RL6_MESCR1.750e-8166.9660S ribosomal protein L6 OS=Mesembryanthemum cryst... [more]
RL63_ARATH2.365e-7865.7960S ribosomal protein L6-3 OS=Arabidopsis thaliana... [more]
RL61_ARATH3.088e-7866.5260S ribosomal protein L6-1 OS=Arabidopsis thaliana... [more]
RL62_ARATH7.607e-7764.9160S ribosomal protein L6-2 OS=Arabidopsis thaliana... [more]
RL6_CHILA6.514e-3639.4560S ribosomal protein L6 OS=Chinchilla lanigera GN... [more]
RL6_PIG1.451e-3539.5960S ribosomal protein L6 OS=Sus scrofa GN=RPL6 PE=... [more]
RL6_BOVIN1.451e-3540.0060S ribosomal protein L6 OS=Bos taurus GN=RPL6 PE=... [more]
RL6_MOUSE2.475e-3539.3860S ribosomal protein L6 OS=Mus musculus GN=Rpl6 P... [more]
RL6_HUMAN2.475e-3539.4360S ribosomal protein L6 OS=Homo sapiens GN=RPL6 P... [more]
RL6_RAT3.575e-3438.8160S ribosomal protein L6 OS=Rattus norvegicus GN=R... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-009-H08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702599 ID=EY702599; Name=EY702599; organism=Citrus sinensis; type=EST; length=884bp
CGAAACTCTCATTCACAGAGGCACAGCAGAAGCGGGTAGCATCAATGGCG
CCGAAGCAAGGGAAGCCAAGAGTGAGCAGGAATCCGGAGCTGATCCGAGG
AATTGGAAAGTTCTCTCGGGCGAGGATGGACCATAAGAGGGGTCTCTGGG
CAATTAAAGCCAAAAACGGTGGCGTCTTTCCTCGTCACGACCCCAAGCCC
AAAGCCGCTGCTCCCGCCGAGAAGCCCCCCAAGTTTTACCCCGCCGATGA
CGTCAAGAAACCACTCGTCAACAAGCGCAAGCCTAAACCCACCAAACTTA
GAGCAAGCATCACCCCAGGGACAGTGCTGATTATACTAGCTGGAAGGGTC
AAGGGTAAGAGAGTTGTGTTCCTGAAGCAGCTTCCATCTGGGTTGCTTCT
AGTTTCTGGGCCATTTAAGATCAATGGTGTTCCTTTACGACGTGTGAACC
AGTCTTACGTGATTGGAACTTCTACCAAAGTTGATATCTCCGGAGTGAAT
GTGGATAAGTTTGATGATAAGTATTTTGCCACGGAAGTCGAGAGGAAGAA
GAACAAAGGACAGAATGAGTTCTTTGAGTCAGAGAAAGAGGAGAAGAAGC
CCCTTCCTCACGAGAAGAAGGATGATCAGAAGTCCTGTGATGCACCCTTG
ATCCAAGGCCTTGAAGCCGTTCCACACCTGAGAGGTTACCTCGGTGCTAG
GGTTTTCCCTAGGGCCGGGATGAAACCCTCATGACCTCGCCTTCTAAAAC
CCGCTGAAACCATTTAGGATGGCTCGCCTCTCCCCCCCTGGTACGGCCCC
GGTGGCAATCTACTCACCCCGCCCACCCTTTGTTCCTGGGAACCCACACC
CCAATTTGGGCCTGAGGCGGCCACGGAACGGCCT
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