EY702592

Overview
NameEY702592
Unique NameEY702592
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length870
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY702592_ssr30 microsatellite EY702592_ssr30:30..41. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY702592 vs. ExPASy Swiss-Prot
Match: MPCP_MOUSE (Phosphate carrier protein, mitochondrial OS=Mus musculus GN=Slc25a3 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.574e-26
Identity = 55/93 (59.14%), Postives = 64/93 (68.82%), Query Frame = 1
Query:  244 RRNFVVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGL 522
            R   + AA  E    E  S  +YA C  GG+LSCGLTHTAV PLDLVKC MQ+DP KYK I +GF + LKE G+RG  +GW PTL+GYS QGL
Sbjct:   38 RSRHLAAAAVEEYSCEFGSMKYYALCGFGGVLSCGLTHTAVVPLDLVKCRMQVDPQKYKGIFNGFSITLKEDGVRGLAKGWAPTLIGYSMQGL 130          
BLAST of EY702592 vs. ExPASy Swiss-Prot
Match: MPCP_RAT (Phosphate carrier protein, mitochondrial OS=Rattus norvegicus GN=Slc25a3 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.974e-26
Identity = 55/93 (59.14%), Postives = 64/93 (68.82%), Query Frame = 1
Query:  244 RRNFVVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGL 522
            R   + AA  E    E  S  +YA C  GG+LSCGLTHTAV PLDLVKC MQ+DP KYK I +GF + LKE G+RG  +GW PTL+GYS QGL
Sbjct:   37 RSRHLAAAAVEGYSCEFGSMKYYALCGFGGVLSCGLTHTAVVPLDLVKCRMQVDPQKYKGIFNGFSITLKEDGVRGLAKGWAPTLIGYSMQGL 129          
BLAST of EY702592 vs. ExPASy Swiss-Prot
Match: MPCP_PONAB (Phosphate carrier protein, mitochondrial OS=Pongo abelii GN=SLC25A3 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.019e-25
Identity = 55/89 (61.80%), Postives = 62/89 (69.66%), Query Frame = 1
Query:  256 VVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGL 522
            + AA  E    E  S  +YA C  GG+LSCGLTHTAV PLDLVKC MQ+DP KYK I +GF V LKE G+RG  +GW PT LGYS QGL
Sbjct:   46 LAAAAVEEYSCEFGSAKYYALCGFGGVLSCGLTHTAVVPLDLVKCRMQVDPQKYKGIFNGFSVTLKEDGVRGLAKGWAPTFLGYSMQGL 134          
BLAST of EY702592 vs. ExPASy Swiss-Prot
Match: MPCP_HUMAN (Phosphate carrier protein, mitochondrial OS=Homo sapiens GN=SLC25A3 PE=1 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 6.605e-25
Identity = 53/92 (57.61%), Postives = 62/92 (67.39%), Query Frame = 1
Query:  247 RNFVVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGL 522
            RN   AA  E    +  S  F+  C +GGI+SCG THTA+ PLDLVKC MQ+DP KYK I +GF V LKE G+RG  +GW PT LGYS QGL
Sbjct:   44 RNLAAAAVEEQYSCDYGSGRFFILCGLGGIISCGTTHTALVPLDLVKCRMQVDPQKYKGIFNGFSVTLKEDGVRGLAKGWAPTFLGYSMQGL 135          
BLAST of EY702592 vs. ExPASy Swiss-Prot
Match: MPCP_CAEEL (Phosphate carrier protein, mitochondrial OS=Caenorhabditis elegans GN=F01G4.6 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.627e-25
Identity = 49/87 (56.32%), Postives = 65/87 (74.71%), Query Frame = 1
Query:  262 AAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGL 522
            +A S PG++E  S  +YA C +GG+LSCG+THTA+ PLDLVKC +Q++P KY  I++GF   + E+G R   +GW PTLLGYSAQGL
Sbjct:   27 SAVSAPGQVEFGSGKYYAYCALGGVLSCGITHTAIVPLDLVKCRIQVNPEKYTGIATGFRTTIAEEGARALVKGWAPTLLGYSAQGL 113          
BLAST of EY702592 vs. ExPASy Swiss-Prot
Match: MPCP_BOVIN (Phosphate carrier protein, mitochondrial OS=Bos taurus GN=SLC25A3 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.627e-25
Identity = 53/92 (57.61%), Postives = 62/92 (67.39%), Query Frame = 1
Query:  247 RNFVVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGL 522
            RN   AA  E    +  S  F+  C +GGI+SCG THTA+ PLDLVKC MQ+DP KYKSI +GF V LKE G RG  +GW PT +GYS QGL
Sbjct:   44 RNLAAAAVEEQYSCDYGSGRFFILCGLGGIISCGTTHTALVPLDLVKCRMQVDPQKYKSIFNGFSVTLKEDGFRGLAKGWAPTFIGYSLQGL 135          
BLAST of EY702592 vs. ExPASy Swiss-Prot
Match: MPCP_CHOFU (Phosphate carrier protein, mitochondrial OS=Choristoneura fumiferana PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.349e-22
Identity = 46/83 (55.42%), Postives = 62/83 (74.70%), Query Frame = 1
Query:  289 EMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGLAVWDL 537
            E  S  ++A C +GGILSCG+THTAV PLDLVKC +Q+D  KYK++ +GF V ++E+G+RG  +GW PT +GYS QGL  + L
Sbjct:   42 EFGSTKYFALCGLGGILSCGITHTAVVPLDLVKCRLQVDADKYKNVVNGFRVSVREEGLRGLAKGWAPTFIGYSLQGLCKFGL 124          
BLAST of EY702592 vs. ExPASy Swiss-Prot
Match: MPCP_SCHPO (Probable mitochondrial phosphate carrier protein OS=Schizosaccharomyces pombe GN=SPBC1703.13c PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.199e-20
Identity = 41/85 (48.24%), Postives = 63/85 (74.12%), Query Frame = 1
Query:  268 PSEPGK-IEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQG 519
            P+ P K +++Y+P +Y  CT+GG+L+CG TH+A+TPLDL+KC  Q++P  Y    +GF  +L ++G+RG + G +PTL+GYS QG
Sbjct:    8 PAPPKKTLQLYTPQYYGLCTLGGLLACGTTHSAITPLDLIKCRKQVNPNIYPGNIAGFKTILSKEGLRGLYTGGMPTLIGYSLQG 92          
BLAST of EY702592 vs. ExPASy Swiss-Prot
Match: PIC2_YEAST (Mitochondrial phosphate carrier protein 2 OS=Saccharomyces cerevisiae GN=PIC2 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.334e-17
Identity = 38/82 (46.34%), Postives = 58/82 (70.73%), Query Frame = 1
Query:  274 EPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQG 519
            +P KI++Y+  FYA CT+GGI++CG TH+++TPLDLVKC +Q++P  Y S   GF  ++  +G +  + G+  T +GYS QG
Sbjct:    6 QPRKIQLYTKEFYATCTLGGIIACGPTHSSITPLDLVKCRLQVNPKLYTSNLQGFRKIIANEGWKKVYTGFGATFVGYSLQG 87          
BLAST of EY702592 vs. ExPASy Swiss-Prot
Match: MCFN_DICDI (Mitochondrial substrate carrier family protein N OS=Dictyostelium discoideum GN=mcfN PE=3 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 6.413e-12
Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 1
Query:  298 SPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQG 519
            +P+ +     GG LSC +TH+ V PLD+VK  +Q +P KY  + +GF  ++KEQG  G  +G  PT +GY+ QG
Sbjct:    6 TPSLFLKYGFGGALSCSITHSLVVPLDVVKTLLQTNPGKYTGMMNGFSTVIKEQGPSGLLQGLGPTAVGYALQG 79          
The following BLAST results are available for this feature:
BLAST of EY702592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
MPCP_MOUSE4.574e-2659.14Phosphate carrier protein, mitochondrial OS=Mus mu... [more]
MPCP_RAT5.974e-2659.14Phosphate carrier protein, mitochondrial OS=Rattus... [more]
MPCP_PONAB1.019e-2561.80Phosphate carrier protein, mitochondrial OS=Pongo ... [more]
MPCP_HUMAN6.605e-2557.61Phosphate carrier protein, mitochondrial OS=Homo s... [more]
MPCP_CAEEL8.627e-2556.32Phosphate carrier protein, mitochondrial OS=Caenor... [more]
MPCP_BOVIN8.627e-2557.61Phosphate carrier protein, mitochondrial OS=Bos ta... [more]
MPCP_CHOFU2.349e-2255.42Phosphate carrier protein, mitochondrial OS=Choris... [more]
MPCP_SCHPO2.199e-2048.24Probable mitochondrial phosphate carrier protein O... [more]
PIC2_YEAST1.334e-1746.34Mitochondrial phosphate carrier protein 2 OS=Sacch... [more]
MCFN_DICDI6.413e-1243.24Mitochondrial substrate carrier family protein N O... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-009-H01-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702592 ID=EY702592; Name=EY702592; organism=Citrus sinensis; type=EST; length=870bp
GGGGAAGAGAAAGAGAAAATTAGAAGAATTCTCTCTCTCTCGCTCTTTTT
CTCTATAATTCAATCAAGCTTTTAACTCTCAAAATCAAATTTCAAAAATT
CCGAAATGGGCCTCACAGAATCTTATAGGAAAAACTCTCTGATACCAAGC
TACCTCTACTCCTCCCAAACATCCTTCCCGTCCACGGCGGCTTTCAATGG
AGCGGCAGCAGCCGCCACGTCGCCGGCTACTCCATCCACGGCGAGGAGGA
ACTTCGTTGTTGCGGCACCGAGCGAGCCAGGGAAGATAGAGATGTACTCC
CCTGCATTCTACGCCGCTTGTACCGTCGGCGGGATCCTCAGCTGCGGCCT
CACTCACACGGCCGTCACTCCTCTTGACCTCGTCAAGTGCAATATGCAGA
TTGATCCTGTTAAGTACAAAAGCATATCATCTGGTTTTGGAGTTTTGCTC
AAGGAACAGGGAATCAGGGGCTTCTTCAGGGGATGGGTACCTACCTTGCT
TGGTTACAGCGCCCAGGGGCTTGCAGTTTGGGATCTACCAGTCCTTCAGA
AGACTACTCTGACATGGCTGGCCACAATATGCTGCTAATACCAGACTTTA
ATCACCTTGCTGGTCCGCTTCTGCTGAGTCATTGGTGGATGTCCCCTTGC
CCCTTTGAGCGCGGGAAGGCCCTGTCCCACTCCGCCTGGCTTTCCCAAGG
TTCGGGGATGGATTCCCAAGTTGTTAATCTCAGGGGCCCTTGGGTCCAAA
AGGGAATGGCCCCCCTTGCNGGCCCCAAACCACAAACCTTGAGGAAGCTG
CCTCCTTTGAACCCTGGTGGAAAATATAAAACATTGAATCCCCCCCAAGG
GCCCGGGGCCAACCCCCCCG
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