EY702588

Overview
NameEY702588
Unique NameEY702588
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY702588 vs. ExPASy Swiss-Prot
Match: ARD3_ARATH (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 3 OS=Arabidopsis thaliana GN=ARD3 PE=2 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 5.045e-73
Identity = 128/175 (73.14%), Postives = 143/175 (81.71%), Query Frame = 1 
Query:   10 RTPPSKDPKEFVSLDQLSELGVLSWRLDADNYETXXXXXXXXXXXXYSYMDFCEGCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIPIWVNKGRMMG*PAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFNRPHDHLPARKGYVQNFLQKEAGDSPIDAAA 534
            R P  KDPKEF+SLD+L+ELGVLSWRLDADNYET            YSYMDFCE CPEKLPNYE K+K+FFEEHLHTDEEIRYCVAGSGYFDVRDRNE WI +WV KG M+  PAG YHRFT+D+DNYIKAMRLFVG+PVWTP+NRPHDHLPARK Y+ NF++   G   IDA+A
Sbjct:   26 RLPHHKDPKEFLSLDKLAELGVLSWRLDADNYETDEDLKKIRESRGYSYMDFCEVCPEKLPNYEVKVKSFFEEHLHTDEEIRYCVAGSGYFDVRDRNEAWIRVWVKKGGMIVLPAGIYHRFTVDSDNYIKAMRLFVGEPVWTPYNRPHDHLPARKEYIDNFVKVNEG-GVIDASA 199
[Close]
BLAST of EY702588 vs. ExPASy Swiss-Prot
Match: ARD2_ARATH (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 OS=Arabidopsis thaliana GN=ARD2 PE=2 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 1.052e-70
Identity = 123/162 (75.93%), Postives = 135/162 (83.33%), Query Frame = 1 
Query:   10 RTPPSKDPKEFVSLDQLSELGVLSWRLDADNYETXXXXXXXXXXXXYSYMDFCEGCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIPIWVNKGRMMG*PAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFNRPHDHLPARKGYVQNFL 495
            R P  KDPKEFVSLD+L+ELGVLSWRLDADNYET            YSYMDFCE CPEKLPNYE K+K+FFEEHLHTDEEIRYCVAG+GYFDVRDRNE WI + V KG M+  PAG YHRFT+D+DNYIKAMRLFVG+PVWTP+NRPHDHLPARK YV NF+
Sbjct:   26 RLPHHKDPKEFVSLDKLAELGVLSWRLDADNYETDEDLKKIRESRGYSYMDFCEVCPEKLPNYEVKVKSFFEEHLHTDEEIRYCVAGTGYFDVRDRNEAWIRVLVKKGGMIVLPAGIYHRFTVDSDNYIKAMRLFVGEPVWTPYNRPHDHLPARKEYVDNFM 187
[Close]
BLAST of EY702588 vs. ExPASy Swiss-Prot
Match: ARD1_ARATH (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 1 OS=Arabidopsis thaliana GN=ARD1 PE=2 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 1.286e-68
Identity = 122/175 (69.71%), Postives = 138/175 (78.86%), Query Frame = 1 
Query:   10 RTPPSKDPKEFVSLDQLSELGVLSWRLDADNYETXXXXXXXXXXXXYSYMDFCEGCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIPIWVNKGRMMG*PAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFNRPHDHLPARKGYVQNFLQKEAGDSPIDAAA 534
            + P  KDPKEFVSLD+L+ELGVL WRLDADNYET            YSYMD CE CPEKLPNYEEK+K FFEEHLH DEEIRYC+AGSGYFDVRD N+ WI +WV KG ++  PAG YHRFT+D+DNY+KAMRLFVG PVWT +NRPHDHLPARK Y++ FL K  GD  IDA+A
Sbjct:   26 KLPHHKDPKEFVSLDKLAELGVLCWRLDADNYETDEELKRIRESRGYSYMDLCEVCPEKLPNYEEKVKMFFEEHLHIDEEIRYCLAGSGYFDVRDLNDIWIRVWVKKGGLIVFPAGIYHRFTVDSDNYMKAMRLFVGGPVWTAYNRPHDHLPARKAYMKKFL-KVIGDRNIDASA 199
[Close]
BLAST of EY702588 vs. ExPASy Swiss-Prot
Match: ARD2_ORYSJ (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 OS=Oryza sativa subsp. japonica GN=ARD2 PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 3.278e-64
Identity = 111/173 (64.16%), Postives = 135/173 (78.03%), Query Frame = 1 
Query:   10 RTPPSKDPKEFVSLDQLSELGVLSWRLDADNYETXXXXXXXXXXXXYSYMDFCEGCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIPIWVNKGRMMG*PAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFNRPHDHLPARKGYVQNFLQKEAGDSPIDA 528
            R P  ++PKEF+ L +LSELG+LSWRL+AD++E             YSYMD C+ CPEKLPNYE K+KNFFEEHLHTDEEIRYC+ GSGYFDVRD+N++WI + V KG M+  PAG YHRFTLD+DNYIKAMRLFVG+PVWTP+NRPHDHLPARK YV+  + +  G   ++A
Sbjct:   26 RLPHHREPKEFIPLSKLSELGILSWRLNADDWENDENLKKIREARGYSYMDICDVCPEKLPNYEAKLKNFFEEHLHTDEEIRYCLEGSGYFDVRDQNDQWIRVAVKKGGMIVLPAGMYHRFTLDSDNYIKAMRLFVGEPVWTPYNRPHDHLPARKEYVEKIINR-GGTQAVEA 197
[Close]
BLAST of EY702588 vs. ExPASy Swiss-Prot
Match: ARD2_ORYSI (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 OS=Oryza sativa subsp. indica GN=ARD2 PE=2 SV=2)

HSP 1 Score: 245.358 bits (625), Expect = 3.278e-64
Identity = 111/173 (64.16%), Postives = 135/173 (78.03%), Query Frame = 1 
Query:   10 RTPPSKDPKEFVSLDQLSELGVLSWRLDADNYETXXXXXXXXXXXXYSYMDFCEGCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIPIWVNKGRMMG*PAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFNRPHDHLPARKGYVQNFLQKEAGDSPIDA 528
            R P  ++PKEF+ L +LSELG+LSWRL+AD++E             YSYMD C+ CPEKLPNYE K+KNFFEEHLHTDEEIRYC+ GSGYFDVRD+N++WI + V KG M+  PAG YHRFTLD+DNYIKAMRLFVG+PVWTP+NRPHDHLPARK YV+  + +  G   ++A
Sbjct:   26 RLPHHREPKEFIPLSKLSELGILSWRLNADDWENDENLKKIREARGYSYMDICDVCPEKLPNYEAKLKNFFEEHLHTDEEIRYCLEGSGYFDVRDQNDQWIRVAVKKGGMIVLPAGMYHRFTLDSDNYIKAMRLFVGEPVWTPYNRPHDHLPARKEYVEKIINR-GGTQAVEA 197
[Close]
BLAST of EY702588 vs. ExPASy Swiss-Prot
Match: ARD1_ORYSJ (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 1 OS=Oryza sativa subsp. japonica GN=ARD1 PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 9.536e-64
Identity = 109/172 (63.37%), Postives = 134/172 (77.91%), Query Frame = 1 
Query:   10 RTPPSKDPKEFVSLDQLSELGVLSWRLDADNYETXXXXXXXXXXXXYSYMDFCEGCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIPIWVNKGRMMG*PAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFNRPHDHLPARKGYVQNFLQKEAGDSPID 525
            R P  ++PKEF+ +D+L+ELGV+SWRL+ DN+E             YSY+D C+ CPEKLPNYE KIK+FFEEHLHTDEEIRYC+ GSGYFDVRD+N++WI I + KG M+  PAG YHRFTLDTDNYIKAMRLFVGDPVWTP+NRPHDHLPARK ++   L+ E  +  ++
Sbjct:   26 RLPHHREPKEFIHVDKLTELGVISWRLNPDNWENCENLKRIREARGYSYVDICDVCPEKLPNYETKIKSFFEEHLHTDEEIRYCLEGSGYFDVRDQNDQWIRIALKKGGMIVLPAGMYHRFTLDTDNYIKAMRLFVGDPVWTPYNRPHDHLPARKEFLAKLLKSEGENQAVE 197
[Close]
BLAST of EY702588 vs. ExPASy Swiss-Prot
Match: ARD1_ORYSI (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 1 OS=Oryza sativa subsp. indica GN=ARD1 PE=1 SV=2)

HSP 1 Score: 243.817 bits (621), Expect = 9.536e-64
Identity = 109/172 (63.37%), Postives = 134/172 (77.91%), Query Frame = 1 
Query:   10 RTPPSKDPKEFVSLDQLSELGVLSWRLDADNYETXXXXXXXXXXXXYSYMDFCEGCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIPIWVNKGRMMG*PAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFNRPHDHLPARKGYVQNFLQKEAGDSPID 525
            R P  ++PKEF+ +D+L+ELGV+SWRL+ DN+E             YSY+D C+ CPEKLPNYE KIK+FFEEHLHTDEEIRYC+ GSGYFDVRD+N++WI I + KG M+  PAG YHRFTLDTDNYIKAMRLFVGDPVWTP+NRPHDHLPARK ++   L+ E  +  ++
Sbjct:   26 RLPHHREPKEFIHVDKLTELGVISWRLNPDNWENCENLKRIREARGYSYVDICDVCPEKLPNYETKIKSFFEEHLHTDEEIRYCLEGSGYFDVRDQNDQWIRIALKKGGMIVLPAGMYHRFTLDTDNYIKAMRLFVGDPVWTPYNRPHDHLPARKEFLAKLLKSEGENQAVE 197
[Close]
BLAST of EY702588 vs. ExPASy Swiss-Prot
Match: ARD4_ARATH (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 4 OS=Arabidopsis thaliana GN=ARD4 PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.803e-54
Identity = 95/164 (57.93%), Postives = 117/164 (71.34%), Query Frame = 1 
Query:   10 RTPPSKDPKEFVSLDQLSELGVLSWRLDADNYETXXXXXXXXXXXXYSYMDFCEGCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIPIWVNKGRMMG*PAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFNRPHDHLPARKGYVQNFLQK 501
            R P  ++PKE VSLD L+ELGVL W+L+ +NYE             Y YMD  + CPEK+ NYEEK+KNFF EH+H DEEIRYC+AGSGYFDVRD++++WI IW+  G ++  PAG YHRFTLD  NYIK MRLFVG+PVWTP+NRP +  P RK Y+     K
Sbjct:   16 RLPHHRNPKELVSLDYLAELGVLYWKLNPENYENDSELSKIREDRGYDYMDLLDLCPEKVSNYEEKLKNFFTEHIHKDEEIRYCLAGSGYFDVRDKDDRWIRIWMQPGDLIVLPAGIYHRFTLDASNYIKLMRLFVGEPVWTPYNRPQEEHPVRKKYIHGLTYK 179
[Close]
BLAST of EY702588 vs. ExPASy Swiss-Prot
Match: MTND_RAT (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Rattus norvegicus GN=Adi1 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 1.024e-49
Identity = 98/166 (59.04%), Postives = 112/166 (67.47%), Query Frame = 1 
Query:   10 RTPPSKDPKEFVSLDQLSELGVLSWRLDADNYETXXXXXXXXXXXXYSYMDFCEGCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIPIWVNKGRMMG*PAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFNRPHDHLPARKGYVQNFLQKEA 507
            R P    P   V L+QL  LGVL W+LDAD YE             YS+MD    C + LPNYEEKIK FFEEHLH DEEIRY + GSGYFDVRD+ +KWI I + KG M+  PAG YHRFTLD  NY+KAMRLFVG+PVWTP+NRP DH  AR  YV+ FL+  A
Sbjct:   15 RMPHRAQPDRPVGLEQLRTLGVLYWKLDADKYENDPELEQIRKTRNYSWMDIITICKDSLPNYEEKIKMFFEEHLHLDEEIRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEKNYVKAMRLFVGEPVWTPYNRPADHFDARVQYVK-FLEGTA 179
[Close]
BLAST of EY702588 vs. ExPASy Swiss-Prot
Match: MTND_MOUSE (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Mus musculus GN=Adi1 PE=1 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 1.024e-49
Identity = 98/166 (59.04%), Postives = 113/166 (68.07%), Query Frame = 1 
Query:   10 RTPPSKDPKEFVSLDQLSELGVLSWRLDADNYETXXXXXXXXXXXXYSYMDFCEGCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIPIWVNKGRMMG*PAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFNRPHDHLPARKGYVQNFLQKEA 507
            R P    P   VSL+QL  LGVL W+LDAD YE             YS+MD    C + LPNYEEKIK FFEEHLH DEEIRY + GSGYFDVRD+ +KWI I + KG M+  PAG YHRFTLD  NY+KAMRLFVG+PVWTP+NRP DH  AR  Y+ +FL+  A
Sbjct:   15 RKPHRAQPDRPVSLEQLRTLGVLYWKLDADKYENDPELEKIRKMRNYSWMDIITICKDTLPNYEEKIKMFFEEHLHLDEEIRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEKNYVKAMRLFVGEPVWTPYNRPADHFDARVQYM-SFLEGTA 179
The following BLAST results are available for this feature:
BLAST of EY702588 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
ARD3_ARATH5.045e-7373.141,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
ARD2_ARATH1.052e-7075.931,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
ARD1_ARATH1.286e-6869.711,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
ARD2_ORYSJ3.278e-6464.161,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
ARD2_ORYSI3.278e-6464.161,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
ARD1_ORYSJ9.536e-6463.371,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
ARD1_ORYSI9.536e-6463.371,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
ARD4_ARATH1.803e-5457.931,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
MTND_RAT1.024e-4959.041,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
MTND_MOUSE1.024e-4959.041,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-009-G08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702588 ID=EY702588; Name=EY702588; organism=Citrus sinensis; type=EST; length=876bp
CCACGCGTCCGGACTCCCCCATCCAAGGATCCAAAGGAATTTGTGTCCCT
GGACCAGCTTTCTGAACTTGGAGTACTCAGCTGGCGATTAGATGCTGATA
ACTATGAAACTGATGAGGAACTGAGGAGGAGGCGGGGAGATCGCGGATAT
TCTTACATGGACTTTTGCGAGGGTTGCCCAGAAAAACTGCCAAATTATGA
AGAGAAGATCAAAAACTTTTTCGAAGAACATCTTCATACAGATGAAGAGA
TCCGCTACTGTGTGGCAGGAAGTGGTTACTTTGATGTCAGGGACCGTAAT
GAAAAATGGATTCCCATATGGGTAAACAAAGGACGAATGATGGGGTGACC
TGCTGGATGTTACCATCGCTTTACTTTGGATACAGACAACTATATCAAGG
CTATGCGTCTGTTTGTAGGTGATCCCGTTTGGACTCCATTCAACCGTCCC
CATGATCATTTACCCGCAAGGAAGGGATATGTTCAAAATTTCTTGCAGAA
GGAAGCTGGTGACAGCCCTATCGATGCTGCTGCGTAATTTGCGCAATTCC
TTGCTCATTGGATCAATAGGACTGGCTTTAATAAATAAAGAAACTTCTGG
TTATATGGGTTGTCTGCGTCTCACGCTCCTGGAGGTACCCGCGGGGGTTA
AGTGCGTTGGTAACATCTCCTGTTGCCTGGGTGCCGCCCCTGCTGGAAAC
TCCCCACGAATATCCGGGGCCTTCCTTTCCGGGATTAAAAGGCCCCGCTA
TATTTTAACCTCTCCGCCCACTGGAACTCCATTCGCACATTCGTGCCTCC
CCCCACAAAAAACAAAAAAGCGCGGCCCCCCCTCAAGCCTCCCGCCTCCC
GGCGCGCGCCTTCGAACCCCCACCCC
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