EY702543

Overview
NameEY702543
Unique NameEY702543
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length910
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702543 vs. ExPASy Swiss-Prot
Match: NOL_ARATH (Chlorophyll(ide) b reductase NOL, chloroplastic OS=Arabidopsis thaliana GN=NOL PE=2 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 2.005e-109
Identity = 142/180 (78.89%), Postives = 152/180 (84.44%), Query Frame = 1
Query:  301 GSNAYSYKPLAETSDEDLLEVITTNSLGLMICCREAMKMMREQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELQMQDVKNVVVHNLSPGMVTTDLLMSGATTKQAQFFINVLAEPADVVAECLVPKIRSIPASGSTNLLIFRSSLEG--GLLPDISRMALGAEETEY 834
            GSNAYS+KPLAE SDEDL+EV+ TN+LGLM+CCREAM MM  Q RGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELQMQDVKNVVVHNLSPGMVTTDLLMSGATTKQA+FFINVLAEPA+VVAE LVP IR+IPASGS      R  L G        SR+ALGA +  Y
Sbjct:  166 GSNAYSFKPLAEASDEDLIEVVKTNTLGLMLCCREAMNMMLTQSRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELQMQDVKNVVVHNLSPGMVTTDLLMSGATTKQAKFFINVLAEPAEVVAEYLVPNIRAIPASGSMKPTYIR-FLTGIKAYTKIFSRVALGARKNRY 344          

HSP 2 Score: 148.673 bits (374), Expect = 2.005e-109
Identity = 70/87 (80.46%), Postives = 81/87 (93.10%), Query Frame = 2
Query:   41 MVPPYNGLITGSTKGIGHALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVREGNEVADLVAFAQKNLKYVDIW 301
            M PPYN LITGSTKGIG+ALA+EFLKAGDNV+ICSRSAERV++AVQSL+EEFGE HVWGTKCDV EG +V +LVA++QKNLKY+DIW
Sbjct:   76 MTPPYNILITGSTKGIGYALAREFLKAGDNVVICSRSAERVETAVQSLKEEFGE-HVWGTKCDVTEGKDVRELVAYSQKNLKYIDIW 161          
BLAST of EY702543 vs. ExPASy Swiss-Prot
Match: NOL_ORYSJ (Chlorophyll(ide) b reductase NOL, chloroplastic OS=Oryza sativa subsp. japonica GN=NOL PE=1 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 6.420e-105
Identity = 135/180 (75.00%), Postives = 151/180 (83.89%), Query Frame = 1
Query:  301 GSNAYSYKPLAETSDEDLLEVITTNSLGLMICCREAMKMMREQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELQMQDVKNVVVHNLSPGMVTTDLLMSGATTKQAQFFINVLAEPADVVAECLVPKIRSIPASGS--TNLLIFRSSLEGGLLPDISRMALGAEETEY 834
            GSNAYSYKPL ETSDE L+EVITTN+LGLMICCREA+ MMR QPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELQM +V NV+VHNLSPGMVTTDLLMSGATTKQA+FFIN+LAEPA+VVA+ LVP IR+IP + S     + F + L+       SR+A GA   +Y
Sbjct:  161 GSNAYSYKPLVETSDEALMEVITTNTLGLMICCREAINMMRNQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELQMNEVNNVMVHNLSPGMVTTDLLMSGATTKQAKFFINILAEPANVVADYLVPNIRAIPTNQSMKPTYIRFLTGLK-AYSRIFSRIAFGARRNKY 339          

HSP 2 Score: 142.895 bits (359), Expect = 6.420e-105
Identity = 67/87 (77.01%), Postives = 76/87 (87.36%), Query Frame = 2
Query:   41 MVPPYNGLITGSTKGIGHALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVREGNEVADLVAFAQKNLKYVDIW 301
            MVPPYN LITGSTKGIG+ALAKEFLKAGDNV+ICSRSAERV+SAV  L++EFGEQHVWG  CDVREG +V  LV FA+  +KY+DIW
Sbjct:   70 MVPPYNVLITGSTKGIGYALAKEFLKAGDNVVICSRSAERVESAVTDLKKEFGEQHVWGIVCDVREGKDVKALVDFARDKMKYIDIW 156          
BLAST of EY702543 vs. ExPASy Swiss-Prot
Match: NYC1_ORYSJ (Probable chlorophyll(ide) b reductase NYC1, chloroplastic OS=Oryza sativa subsp. japonica GN=NYC1 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 9.100e-43
Identity = 63/141 (44.68%), Postives = 91/141 (64.54%), Query Frame = 1
Query:  319 YKPLAETSDEDLLEVITTNSLGLMICCREAMKMMREQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELQMQDVKNVVVHNLSPGMVTTDLLMSGATTKQAQFFINVLAEPADVVAECLVPKIRSIPASG 741
            ++PL   SDED+ ++++TN +G ++C REAM +M+ Q +GGH+FN+DGAGS G  TP  A YG+TK  +     SL  E +      V VH  SPGMV TDLL+SG++ +  Q F N++ E  + VA  LVP++R +  SG
Sbjct:  278 FRPLVNFSDEDISQIVSTNLVGSLLCTREAMNVMQHQQKGGHVFNMDGAGSGGSSTPLTAVYGSTKCGLRQFQASLLKESRR---SKVGVHTASPGMVLTDLLLSGSSLRNKQMF-NLICELPETVARTLVPRMRVVKGSG 414          

HSP 2 Score: 71.2478 bits (173), Expect = 9.100e-43
Identity = 42/99 (42.42%), Postives = 53/99 (53.54%), Query Frame = 2
Query:   50 PYNGLITGSTKGIGHALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE---------------QHVWGTKCDVREGNEVADLVAFAQKNLKYVDIW 301
            P N +ITGST+G+G ALA+EFL +GD V+I SRS E V   +  L E   E                 V GT CDV +  +V  LV FA+  L  +DIW
Sbjct:  170 PRNVVITGSTRGLGKALAREFLLSGDRVVIASRSPESVLQTINELEENIQEGLSVAKKKQREILLHAKVVGTSCDVCKPEDVKKLVNFAKDELGSIDIW 268          
BLAST of EY702543 vs. ExPASy Swiss-Prot
Match: NYC1_ARATH (Probable chlorophyll(ide) b reductase NYC1, chloroplastic OS=Arabidopsis thaliana GN=NYC1 PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 2.180e-41
Identity = 73/185 (39.46%), Postives = 102/185 (55.14%), Query Frame = 1
Query:  319 YKPLAETSDEDLLEVITTNSLGLMICCREAMKMMREQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELQMQDVKNVVVHNLSPGMVTTDLLMSGATTKQAQFFINVLAEPADVVAECLVPKIRSIPASGST---------NLLIFRSSLEGGLLPDISRMALGAEETEYPGRW 846
            ++PL E ++ED+ ++++TN +G ++C R AM +M  Q  GGHIFN+DGAGS G  TP  A YG+TK  +     S+  E Q     NV +H  SPGMV T+LL+SG++ K  Q F N++ E  + VA  LVP++R +  SG            L I  S L  G   D    AL A E +    W
Sbjct:  269 FRPLLEFTEEDITQIVSTNLIGSILCTRGAMDVMSRQHSGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQFHGSIVKESQK---TNVGLHTASPGMVLTELLLSGSSIKNKQMF-NIICELPETVARTLVPRMRVVKGSGKAVNYLTPPRILLAIVTSWLRRGRWFDDQGRALYAAEADRLRNW 449          

HSP 2 Score: 70.4774 bits (171), Expect = 2.180e-41
Identity = 41/99 (41.41%), Postives = 57/99 (57.58%), Query Frame = 2
Query:   50 PYNGLITGSTKGIGHALAKEFLKAGDNVIICSRSAERVD---------------SAVQSLREEFGEQHVWGTKCDVREGNEVADLVAFAQKNLKYVDIW 301
            P N +ITGST+G+G ALA+EFL +GD VI+ SRS+E VD               +A +S R++  +  V G  CDV +  +V  L  FA K L  ++IW
Sbjct:  161 PRNVVITGSTRGLGKALAREFLLSGDRVIVTSRSSESVDMTVKELEQNLKEIMSNASESARKKLSDAKVVGIACDVCKPEDVEKLSNFAVKELGSINIW 259          
BLAST of EY702543 vs. ExPASy Swiss-Prot
Match: DHK1_STRVN (Granaticin polyketide synthase putative ketoacyl reductase 1 OS=Streptomyces violaceoruber GN=gra-orf5 PE=3 SV=1)

HSP 1 Score: 50.447 bits (119), Expect = 5.584e-12
Identity = 30/79 (37.97%), Postives = 43/79 (54.43%), Query Frame = 2
Query:   62 LITGSTKGIGHALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVREGNEVADLVAFAQKNLKYVDI 298
            L+TG+T GIG A+A+     G    +C+R  ER+   V+ LR E  +  V GT CDV +  ++   VA A +    VDI
Sbjct:   21 LVTGATSGIGLAIARRLAALGARTFLCARDEERLAQTVKELRGEGFD--VDGTVCDVADPAQIRAYVAAAVQRYGTVDI 97          

HSP 2 Score: 41.5874 bits (96), Expect = 5.584e-12
Identity = 34/100 (34.00%), Postives = 48/100 (48.00%), Query Frame = 1
Query:  331 AETSDEDLLEVITTNSLGLMICCREAMKM--MREQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELQMQDVKNVVVHNLSPGMVTTDL 624
            AE +DE  L+VITTN   + +  +E +    M  + R G I NI   G   +       Y A+K  VV LTK+L  EL       + V+ + PG V T +
Sbjct:  111 AEIADELWLDVITTNLTSVFLMTKEVLNAGGMLAKKR-GRIINIASTGGK-QGVVHAVPYSASKHGVVGLTKALGLELAR---TGITVNAVCPGFVETPM 205          
BLAST of EY702543 vs. ExPASy Swiss-Prot
Match: SDR1_PICAB (Short-chain type dehydrogenase/reductase OS=Picea abies PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 5.586e-12
Identity = 37/106 (34.91%), Postives = 56/106 (52.83%), Query Frame = 1
Query:  319 YKPLAETSDEDLLEVITTNSLGLMICCREAMKMMREQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELQMQDVKNVVVHNLSPGMVTTDLLMSG 636
            Y  LA+TSDE+   +   N  G  +C REA K +  +  GG I NI  +     P PR+ AY A+K +V  +T+ L  EL+      +  + ++PG V TD+  +G
Sbjct:  120 YPTLAQTSDEEWDRIFQVNCKGAFLCSREAAKRV-VRGGGGRIINI-SSSLVAMPIPRYGAYTASKAAVEMMTRILAQELR---GTQITANCVAPGPVATDMFFAG 220          

HSP 2 Score: 33.4982 bits (75), Expect = 5.586e-12
Identity = 26/93 (27.96%), Postives = 44/93 (47.31%), Query Frame = 2
Query:   62 LITGSTKGIGHALAKEFLKAGDNVII----CSRSAERVDSAVQSLREEFGE-QHVWGTKCDVREGNEVADLVAFAQKNLKYVDIWDQMHIVIN 325
            ++TG+++GIG  +A    + G  V+I       +AE V S + +     G+       K DV E ++VA L   A+        +  +HIV+N
Sbjct:   25 IVTGASRGIGREIALNMAEKGAKVVIHYSSNQHAAEEVASIINNKSPSSGDGVRAIVCKADVAEPSQVAQLFDTAE------HAFGPLHIVVN 111          
BLAST of EY702543 vs. ExPASy Swiss-Prot
Match: CBR4_DANRE (Carbonyl reductase family member 4 OS=Danio rerio GN=cbr4 PE=2 SV=1)

HSP 1 Score: 49.2914 bits (116), Expect = 9.469e-12
Identity = 39/132 (29.55%), Postives = 63/132 (47.73%), Query Frame = 1
Query:  328 LAETSDEDLLEVITTNSLGLMICCREAMKMMREQPRGGHIFNIDGA----GSDGRPTPRFAAYGATKRSVVHLTKSLQAELQMQDVKNVVVHNLSPGMVTTDLLMSGATTKQAQFF-INVLAEPADVVAECL 708
            L  +  ED+L V+ TN LG M+ C+ A++ M     GG I NI       G+ G+       Y A+K  +   T+SL  E+     +N+ V+ ++PG++ TD+    A     +   +    EPA+V    L
Sbjct:   93 LLRSKSEDMLSVLHTNLLGSMLTCKAAVRNMLSH--GGAIVNIGSVVGVKGNAGQ-----CVYSASKAGLEGFTRSLAKEVAS---RNIRVNLVAPGLIHTDMTAGLAEEAAVRTIPLGRFGEPAEVAQAML 214          

HSP 2 Score: 41.9726 bits (97), Expect = 9.469e-12
Identity = 23/63 (36.51%), Postives = 35/63 (55.56%), Query Frame = 2
Query:   62 LITGSTKGIGHALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVREGNEV 250
            ++ G ++GIG A +K   + G  +++ SR+ E   S  QSL    GE H+ G  CDV +  EV
Sbjct:    6 VVFGGSRGIGRAASKLLAQRGHRIVLLSRNKEAAQSTAQSLP---GENHL-GLSCDVSKEEEV 64          
The following BLAST results are available for this feature:
BLAST of EY702543 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
NOL_ARATH2.005e-10978.89Chlorophyll(ide) b reductase NOL, chloroplastic OS... [more]
NOL_ORYSJ6.420e-10575.00Chlorophyll(ide) b reductase NOL, chloroplastic OS... [more]
NYC1_ORYSJ9.100e-4344.68Probable chlorophyll(ide) b reductase NYC1, chloro... [more]
NYC1_ARATH2.180e-4139.46Probable chlorophyll(ide) b reductase NYC1, chloro... [more]
DHK1_STRVN5.584e-1237.97Granaticin polyketide synthase putative ketoacyl r... [more]
SDR1_PICAB5.586e-1234.91Short-chain type dehydrogenase/reductase OS=Picea ... [more]
CBR4_DANRE9.469e-1229.55Carbonyl reductase family member 4 OS=Danio rerio ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-009-C06-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702543 ID=EY702543; Name=EY702543; organism=Citrus sinensis; type=EST; length=910bp
TGCTCCACCCACGCGTCCGCTTCTTCTGTTAACCAGACCAATGGTCCCTC
CCTACAATGGCTTGATTACTGGTTCTACCAAAGGAATTGGCCATGCATTG
GCTAAAGAATTTCTAAAAGCTGGTGACAATGTCATAATTTGCTCAAGATC
AGCAGAGAGAGTGGACTCAGCTGTTCAGAGTCTGAGAGAAGAATTTGGGG
AGCAGCATGTGTGGGGTACAAAATGTGATGTTAGAGAAGGGAATGAAGTG
GCAGATTTAGTTGCGTTTGCACAAAAGAACTTGAAATATGTTGATATTTG
GGATCAAATGCATATAGTTATAAACCCTTAGCAGAAACTTCAGATGAAGA
TCTGCTTGAAGTTATCACTACAAACTCTCTTGGTCTAATGATTTGTTGTC
GAGAGGCTATGAAAATGATGCGGGAACAACCTCGAGGGGGTCATATTTTC
AACATTGATGGAGCAGGTTCTGATGGAAGACCCACCCCAAGATTTGCTGC
ATATGGGGCAACTAAACGTAGTGTAGTGCATTTGACAAAGTCATTACAGG
CAGAATTGCAGATGCAAGATGTTAAAAATGTTGTGGTGCATAATTTGTCC
CCAGGAATGGTGACAACTGATCTTCTCATGTCTGGTGCTACTACAAAGCA
GGCCCAATTCTTCATTAATGTTTTGGCAGAACCAGCTGATGTGGTTGCTG
AGTGTCTTGTCCCTAAAATCAGATCCATCCCTGCCAGTGGATCCACAAAC
CTACTTATCTTCCGTTCCTCACTGGAGGGAGGGCTACTCCCAGATATCTC
GAGAATGGCTTTGGGGGCAGAAGAAACCGAATATCCTGGAAGATGGAAAA
CATTGGAACGGATGCCCTTGTTGGAACCTAAAAAACCGTTCCTAATTATT
TCCTCTTTAA
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