DY305462

Overview
NameDY305462
Unique NameDY305462
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1115
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig580 contig Csv1_Contig580:90..1204. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: HT1_ARATH (Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana GN=HT1 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 6.373e-29
Identity = 68/145 (46.90%), Postives = 91/145 (62.76%), Query Frame = 1
Query:   10 YLHKNHNV-LKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVPYDSMTPLQAALGVRQCSLRG*NAPRCSSCSVKLS 441
            YL+K     L +  +LR A+DI +GMEYLH   +IHRDLK+ NLL++    VKVADFG +  + +        GTYRWMAPE+I  + Y +K DV+SF IVLWEL TA +P+  MTP+QAA  V + + R    P  +SC   L+
Sbjct:  175 YLNKKEPYSLSIETVLRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETQCREAKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKNER---PPLPASCQPALA 316          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: Y9955_DICDI (Probable serine/threonine-protein kinase DDB_G0267514 OS=Dictyostelium discoideum GN=DDB_G0267514 PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 2.267e-26
Identity = 56/132 (42.42%), Postives = 84/132 (63.64%), Query Frame = 1
Query:    1 VYDYLHKNHNVLKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVPYDSMTPLQAALGVRQCSLR 396
            +YD LH     + +    + AI I +GM YLH S +IHRD+K+ NLL+D H  VK+ DFG+++ ++K   MT   G+  WM+PE++  + Y +K DV++F I+LWEL T ++PY  +  +Q AL V   SLR
Sbjct:  745 LYDALHSKKIKMNMQLYKKLAIQIAQGMNYLHLSGVIHRDIKSLNLLLDEHMNVKICDFGLSKLKSKSTEMTKSIGSPIWMSPELLMGEDYTEKVDVYAFGIILWELGTGELPYSGLDSVQLALAVTTKSLR 876          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: Y9963_DICDI (Probable serine/threonine-protein kinase DDB_G0272254 OS=Dictyostelium discoideum GN=DDB_G0272254 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 3.866e-26
Identity = 58/116 (50.00%), Postives = 80/116 (68.97%), Query Frame = 1
Query:   49 LLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVPYDSMTPLQAALGVRQCSLR 396
            +L  A DI +GM++LH  NIIHRDLK++NLLMD H  +K+AD G+AR  +    MT   GT  W APE++ H+ Y+QKADV+S+AIVL+EL+T + PY  + P+ A + V    LR
Sbjct: 1177 ILAIAFDIARGMQHLHTRNIIHRDLKSSNLLMDKHFNIKIADLGIARETSFTQTMTT-IGTVAWTAPEILRHESYNQKADVYSYAIVLYELLTGEEPYQGIPPMNAGILVASKGLR 1291          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: DRKC_DICDI (Probable serine/threonine-protein kinase drkC OS=Dictyostelium discoideum GN=drkC PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 4.726e-24
Identity = 68/151 (45.03%), Postives = 90/151 (59.60%), Query Frame = 1
Query:    1 VYDYLHKNHNVLKLSQLLRFAIDICKGMEYLHQSN--IIHRDLKTANLLMDTHNVVKVADFGVA-RFQNKGGVMTAET--GTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVPYDSMTPLQAALGVRQCSLRG*NAPRCSSCSVKL 438
            +Y  LH     L   ++   A+DI KGM YLH  +  +IHRDLK+ NLL+D H  VK++DFG++ RF+      TA T  GT  W APEV+ +  Y +KADVFSFAIVLWE+VT + PY  M   Q  + V Q  LR    P+ S+   +L
Sbjct:  574 LYRILHDPSISLDWPRMKSMALDIAKGMNYLHCCDPIVIHRDLKSHNLLVDEHYRVKISDFGLSTRFKKHLDKKTAMTPVGTPCWTAPEVLRNDPYTEKADVFSFAIVLWEIVTREDPYQGMPTFQIVISVGQHKLRPIVPPQVSAPFTRL 724          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: DRKA_DICDI (Probable serine/threonine-protein kinase drkA OS=Dictyostelium discoideum GN=drkA PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.053e-23
Identity = 60/134 (44.78%), Postives = 82/134 (61.19%), Query Frame = 1
Query:    1 VYDYLHKNHNVLKLSQLLRFAIDICKGMEYLHQSN--IIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVPYDSMTPLQAALGVRQCSLR 396
            +Y  LH     L+ S L++  ID  KG+ YLH S   I+HRDLK+ NLL+D +  VKVADFG++  + +G  MTA  GT  W +PEV+  Q Y +KADV+SF I+LWE  T + PY  + P Q    V +  +R
Sbjct:  456 LYSILHDQALQLQWSLLIKMMIDAAKGVIYLHNSTPVILHRDLKSHNLLVDENWKVKVADFGLSTIEQQGATMTA-CGTPCWTSPEVLRSQRYTEKADVYSFGIILWECATRQDPYFGIPPFQVIFAVGREGMR 588          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: RCKA_DICDI (RGS domain-containing serine/threonine-protein kinase A OS=Dictyostelium discoideum GN=rckA PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 6.824e-23
Identity = 51/115 (44.35%), Postives = 70/115 (60.87%), Query Frame = 1
Query:    1 VYDYLHKNHNVLKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVPYD 345
            ++ YL    N +   Q L FA+ I +GM YLH  +IIHRDLK+ N+L+     +K+ DFG +R  NK   MT   GT  WMAPE+   + Y  K DV+S+AI+L+E+ T K  YD
Sbjct:  924 LFSYLRDQRNNISFGQRLHFALGIARGMRYLHSMSIIHRDLKSMNILLTKRLKIKIVDFGTSRVANKYN-MTTHVGTQAWMAPEIFTSRTYTNKVDVYSYAIILFEIFTRKSAYD 1037          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: DRKB_DICDI (Probable serine/threonine-protein kinase drkB OS=Dictyostelium discoideum GN=drkB PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 6.824e-23
Identity = 59/134 (44.03%), Postives = 80/134 (59.70%), Query Frame = 1
Query:    1 VYDYLHKNHNVLKLSQLLRFAIDICKGMEYLHQSN--IIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVPYDSMTPLQAALGVRQCSLR 396
            +Y  LH     +  S + R  ID  KG+ YLH S   I+HRDLK+ NLL+D +  VKVADFG++  + +G  MTA  GT  W +PEV+  Q Y +KADV+SF I+LWE  T + PY  + P Q    V +  +R
Sbjct:  473 LYSILHNEKIKISWSLVKRMMIDAAKGIIYLHGSTPVILHRDLKSHNLLVDENWKVKVADFGLSTIEQQGATMTA-CGTPCWTSPEVLRSQRYTEKADVYSFGIILWECATRQDPYFGIPPFQVIFAVGREGMR 605          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: YR826_MIMIV (Putative serine/threonine-protein kinase/receptor R826 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R826 PE=4 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 2.867e-21
Identity = 49/105 (46.67%), Postives = 73/105 (69.52%), Query Frame = 1
Query:   34 LKLSQLLRFAIDICKGMEYLHQSN--IIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVPY 342
            L+  Q ++  ++I KG+ YLH  +  IIHRD+K +N+L+D +  VK+ADFG AR + +  +MT   GT  W APE+I + +YD+K DVFSF IV+WE++T K P+
Sbjct: 1492 LEWHQKIKILVNIAKGISYLHSFDPPIIHRDIKPSNILIDENWNVKIADFGFARIKEENAIMT-RCGTPCWTAPEIIRNDIYDEKVDVFSFGIVMWEVLTCKEPF 1595          

HSP 2 Score: 88.9669 bits (219), Expect = 5.596e-17
Identity = 46/113 (40.71%), Postives = 70/113 (61.95%), Query Frame = 1
Query:   52 LRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAE--TGTYRWMAPEVI--NHQLYDQKADVFSFAIVLWELVTAKVPYDSMTPLQAALGV 378
            ++ A    KGM +LH S I HRDLK+ NLL+D    VKV+DFG+ +F++    +  E   GT +W APE++  + ++    +DV+SF I++WEL+T   PY  M+P   A+ V
Sbjct:  887 VKIAYQASKGMHFLHSSGITHRDLKSLNLLLDIKWNVKVSDFGLTKFKSDVKSINPEKFAGTIQWTAPEILSEDREVDYILSDVYSFGIIMWELITRDQPYFGMSPAAIAVSV 999          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: DLK1_CAEEL (Mitogen-activated protein kinase kinase kinase dlk-1 OS=Caenorhabditis elegans GN=dlk-1 PE=1 SV=4)

HSP 1 Score: 103.219 bits (256), Expect = 2.867e-21
Identity = 47/121 (38.84%), Postives = 73/121 (60.33%), Query Frame = 1
Query:   19 KNHNVLKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNK-GGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVPYDSMTPLQAALGV 378
            K+ N +      ++  +I  GM YLHQ+ +IHRDLK+ N+L+   + +K+ DFG +  Q K    M +  GT  WMAPE+I  Q  ++K DV+SF +VLWE++T + PY ++  +    GV
Sbjct:  213 KSRNTITRELFAQWVKEIADGMHYLHQNKVIHRDLKSPNILISAEDSIKICDFGTSHMQKKMDSTMMSFCGTVSWMAPEMIKKQPCNEKVDVYSFGVVLWEMLTRETPYANIAQMAIIFGV 333          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: MLTK_MOUSE (Mitogen-activated protein kinase kinase kinase MLT OS=Mus musculus GN=Mltk PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 4.891e-21
Identity = 49/127 (38.58%), Postives = 78/127 (61.42%), Query Frame = 1
Query:    1 VYDYLHKNHNV-LKLSQLLRFAIDICKGMEYLHQS---NIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVPYDSMTPLQAA 369
            +YDY++ N +  + +  ++ +A D+ KGM YLH      +IHRDLK+ N+++    V+K+ DFG +RF N    M+   GT+ WMAPEVI      +  D +S+ +VLWE++T +VP+  +  LQ A
Sbjct:   90 LYDYINSNRSEEMDMEHIMTWATDVAKGMHYLHMEAPVKVIHRDLKSRNVVIAADGVLKICDFGASRFHNHTTHMSL-VGTFPWMAPEVIQSLPVSETCDTYSYGVVLWEMLTREVPFKGLEGLQVA 215          
The following BLAST results are available for this feature:
BLAST of DY305462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HT1_ARATH6.373e-2946.90Serine/threonine-protein kinase HT1 OS=Arabidopsis... [more]
Y9955_DICDI2.267e-2642.42Probable serine/threonine-protein kinase DDB_G0267... [more]
Y9963_DICDI3.866e-2650.00Probable serine/threonine-protein kinase DDB_G0272... [more]
DRKC_DICDI4.726e-2445.03Probable serine/threonine-protein kinase drkC OS=D... [more]
DRKA_DICDI1.053e-2344.78Probable serine/threonine-protein kinase drkA OS=D... [more]
RCKA_DICDI6.824e-2344.35RGS domain-containing serine/threonine-protein kin... [more]
DRKB_DICDI6.824e-2344.03Probable serine/threonine-protein kinase drkB OS=D... [more]
YR826_MIMIV2.867e-2146.67Putative serine/threonine-protein kinase/receptor ... [more]
DLK1_CAEEL2.867e-2138.84Mitogen-activated protein kinase kinase kinase dlk... [more]
MLTK_MOUSE4.891e-2138.58Mitogen-activated protein kinase kinase kinase MLT... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAM1AC09RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305462 ID=DY305462; Name=DY305462; organism=Citrus sinensis; type=EST; length=1115bp
GTGTATGATTACTTGCATAAGAATCATAATGTCTTGAAGTTGTCTCAGTT
GCTGAGGTTTGCAATTGATATTTGCAAAGGAATGGAGTATTTGCATCAAA
GCAACATAATTCATAGGGATCTTAAAACAGCAAATTTGCTAATGGACACT
CACAATGTTGTTAAGGTGGCAGATTTTGGTGTTGCTCGGTTCCAAAACAA
AGGGGGAGTAATGACAGCCGAGACCGGAACATATAGGTGGATGGCACCAG
AGGTTATAAACCACCAGCTGTATGACCAGAAAGCAGATGTCTTCAGTTTC
GCTATCGTACTATGGGAGCTAGTGACAGCCAAGGTTCCATATGATTCCAT
GACTCCTTTACAAGCTGCCCTGGGAGTTAGACAGTGCTCTCTGAGAGGTT
AGAATGCCCCAAGATGTTCATCATGTTCAGTCAAACTGTCATGCGACTGA
ACTTATGAAATTGAATAATGCCTGACCATGTAATTAAGGAGAAGAGCATG
GAGGAAAGATGACTGCTCAAGAAATGTGTGGAAGGGAGTTGGTGCATGAG
CAAAAGAAATTTGAGCTCTAACACTTGTTCTTTTCTCTTGGAATCTTGGT
GTACTCCAACATGCTTAAGCTGCCTTGTGAAAAAAATCCCCGTGTTCATG
TCTAATTGTTACATTACACACTCTCCTTTCCAGGGACTACACCCTGATCT
TCCTGAGAATGCACACCCAAAACTTATAAACTTGATGCAGAGATGTTGGG
ATGCAATTTCTGACAATCCACCATCATTCTCTGGAAATAAACTTGAACTC
CAAGTACTTCCCCCAGAAATTCAGGAGCTGTAAATGGCAACTGGAAAACA
TAAACAATATCTCTAAACCACTCCTTAAAAGAAATCTTTGTTTTTTTTTT
GTCGGTTTAAATTTTTTATAAAGGTTTACAACTGAAAGGAAAAAAAAATT
CCAAAAGGACTTTATTTTCCCACAACATAAAAAAAAAAAAAAGGCGAGTT
CTAAAACCTTTAATTTTCCTTTTTATTTTTTTGTTTCTTTGACCGCCTTT
CCCGGTTTTAAAAATTTTTTTTTTTTTTTTAAATTTGTGGTTCCTAAAAT
TTTTTAACTCGTGTT
back to top