EY702537
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702537 vs. ExPASy Swiss-Prot
Match: CB4A_SOLLC (Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 4.648e-72 Identity = 85/112 (75.89%), Postives = 92/112 (82.14%), Query Frame = 1 Query: 13 GKDPAFLKWYREAELIHGRWAMAAVVGIFLGQTWSXXXXXXXXXXXXXXXXFSFGSLLGTQLLLMGWVESKRWADFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKVF 348 GKDPAFLKWYREAELIHGRWAMAAV+GIF+GQ WS FSFG+LLGTQL+LMGWVESKRW DFF+P+SQSVEWATPWS+TAENFAN TGEQGYPGGK F Sbjct: 87 GKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGIPWFEAGADPGAIAPFSFGTLLGTQLILMGWVESKRWVDFFDPDSQSVEWATPWSKTAENFANFTGEQGYPGGKFF 198 HSP 2 Score: 107.457 bits (267), Expect = 4.648e-72 Identity = 51/59 (86.44%), Postives = 55/59 (93.22%), Query Frame = 2 Query: 347 FDPLCLAGTIKDGVYIPDTEKLDRLKAAEIKHARLAMAAMLIFYFEAGQGKTPLGALGL 523 FDPL LAGT+ +GVY+PDTEKL+RLK AEIKHARLAM AMLIFYFEAGQGKTPLGALGL Sbjct: 198 FDPLALAGTLNNGVYVPDTEKLERLKVAEIKHARLAMLAMLIFYFEAGQGKTPLGALGL 256
BLAST of EY702537 vs. ExPASy Swiss-Prot
Match: CB4_SPIOL (Chlorophyll a-b binding protein CP24, chloroplastic OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 1.125e-70 Identity = 84/112 (75.00%), Postives = 92/112 (82.14%), Query Frame = 1 Query: 13 GKDPAFLKWYREAELIHGRWAMAAVVGIFLGQTWSXXXXXXXXXXXXXXXXFSFGSLLGTQLLLMGWVESKRWADFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKVF 348 GKDPAFLKWYREAELIHGRWAM AV+GIF+GQ W+ FSFG+LLGTQLLLMGWVESKRW DFF+P+SQSVEWATPWSRTAENF+N+TGEQGYPGGK F Sbjct: 92 GKDPAFLKWYREAELIHGRWAMLAVLGIFVGQAWTGIPWFEAGADPGAVAPFSFGTLLGTQLLLMGWVESKRWVDFFDPDSQSVEWATPWSRTAENFSNSTGEQGYPGGKFF 203 HSP 2 Score: 103.99 bits (258), Expect = 1.125e-70 Identity = 51/59 (86.44%), Postives = 54/59 (91.53%), Query Frame = 2 Query: 347 FDPLCLAGTIKDGVYIPDTEKLDRLKAAEIKHARLAMAAMLIFYFEAGQGKTPLGALGL 523 FDPL LAGTI +GVY PDT+KL+RLK AEIKHARLAM AMLIFYFEAGQGKTPLGALGL Sbjct: 203 FDPLSLAGTISNGVYNPDTDKLERLKLAEIKHARLAMLAMLIFYFEAGQGKTPLGALGL 261
BLAST of EY702537 vs. ExPASy Swiss-Prot
Match: CB4B_SOLLC (Chlorophyll a-b binding protein CP24 10B, chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.125e-70 Identity = 84/112 (75.00%), Postives = 91/112 (81.25%), Query Frame = 1 Query: 13 GKDPAFLKWYREAELIHGRWAMAAVVGIFLGQTWSXXXXXXXXXXXXXXXXFSFGSLLGTQLLLMGWVESKRWADFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKVF 348 GKDPAFLKWYREAELIHGRWAMAAV+GIF+GQ WS FSFGSLLGTQLLLMGWVESKRW DFF+ +SQS++WATPWS+TAENFAN TGEQGYPGGK F Sbjct: 87 GKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFDNDSQSIDWATPWSKTAENFANFTGEQGYPGGKFF 198 HSP 2 Score: 105.916 bits (263), Expect = 1.125e-70 Identity = 50/59 (84.75%), Postives = 55/59 (93.22%), Query Frame = 2 Query: 347 FDPLCLAGTIKDGVYIPDTEKLDRLKAAEIKHARLAMAAMLIFYFEAGQGKTPLGALGL 523 FDPL LAGT+ +GVY+PDTEKL+RLK AEIKH+RLAM AMLIFYFEAGQGKTPLGALGL Sbjct: 198 FDPLALAGTLNNGVYVPDTEKLERLKLAEIKHSRLAMLAMLIFYFEAGQGKTPLGALGL 256
BLAST of EY702537 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 6.947e-11 Identity = 39/124 (31.45%), Postives = 55/124 (44.35%), Query Frame = 1 Query: 13 GKDPAFLKWYREAELIHGRWAMAAVVGIFLGQTWSXXXXXXXXXXXXXXXXFSF---GSLLGTQLLLMGWVESKRWADFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKVF*SLMFGWNN 375 G DP LKW +AEL+H RWAM GIF+ + + F +L +L+L+GW E +RWAD P + + P ++ + GYPGG F L GW + Sbjct: 94 GSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGT------DVGYPGGLWFDPL--GWGS 209 HSP 2 Score: 25.409 bits (54), Expect = 6.947e-11 Identity = 11/26 (42.31%), Postives = 18/26 (69.23%), Query Frame = 2 Query: 407 KLDRLKAAEIKHARLAMAAMLIFYFE 484 K+ L+ EIK+ RLAM A++ +F+ Sbjct: 214 KIKELRTKEIKNGRLAMLAVMGAWFQ 239 The following BLAST results are available for this feature:
BLAST of EY702537 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY702537 ID=EY702537; Name=EY702537; organism=Citrus sinensis; type=EST; length=851bpback to top |