DY305448

Overview
NameDY305448
Unique NameDY305448
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1286
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12444 contig Csv1_Contig12444:603..1889. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY305448 vs. ExPASy Swiss-Prot
Match: GPA2_SOYBN (Guanine nucleotide-binding protein alpha-2 subunit OS=Glycine max GN=GPA2 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.899e-19
Identity = 57/157 (36.31%), Postives = 89/157 (56.69%), Query Frame = 3
Query:    6 ISKTGYEPSDMDILYAEEITSTNGLLSMLFSLPEQTQENSISDSSDQNDPLLSYQLIRVHPRSLGENCKWLQMFEDADMVLFCVSLTAYDE-YFEDSKGFLTNKMLASRQLFQNIVIHPTFNQKNFLLILNKYDMLEEKIEEVPLSRCEWFEDFNPV 473
            +S   Y P+  D+LYA     T G++ + FS      EN  SD          Y+L  V  +   E  KW+ +FE    V+FC +++ YD+  FED      N+M+ +++LF+ I+  P F + +F+L LNK+D+ E+KI +VPL+ CEWF+D+ PV
Sbjct:  176 LSDANYVPTKEDVLYAR--VRTTGVVEIQFS---PVGENKKSDEV--------YRLFDVGGQR-NERRKWIHLFEGVSAVIFCAAISEYDQTLFEDEN---RNRMMETKELFEWILKQPCFEKTSFMLFLNKFDIFEKKILKVPLNVCEWFKDYQPV 315          
BLAST of DY305448 vs. ExPASy Swiss-Prot
Match: GPA1_ORYSJ (Guanine nucleotide-binding protein alpha-1 subunit OS=Oryza sativa subsp. japonica GN=GPA1 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 7.216e-19
Identity = 53/158 (33.54%), Postives = 92/158 (58.23%), Query Frame = 3
Query:    6 ISKTGYEPSDMDILYAEEITSTNGLLSMLFS-LPEQTQENSISDSSDQNDPLLSYQLIRVHPRSLGENCKWLQMFEDADMVLFCVSLTAYDEY-FEDSKGFLTNKMLASRQLFQNIVIHPTFNQKNFLLILNKYDMLEEKIEEVPLSRCEWFEDFNPV 473
            +++ GY P+  D+LYA     TNG++ + FS + E  +   +            Y+L  V  +   E  KW+ +FE  + V+FC +++ YD+  FED      N+M+ +++LF  ++    F + +F+L LNK+D+ E+KI++VPLS CEWF+D+ P+
Sbjct:  175 LAEAGYVPTKEDVLYAR--VRTNGVVQIQFSPVGENKRGGEV------------YRLYDVGGQR-NERRKWIHLFEGVNAVIFCAAISEYDQMLFEDET---KNRMMETKELFDWVLKQRCFEKTSFILFLNKFDIFEKKIQKVPLSVCEWFKDYQPI 314          
BLAST of DY305448 vs. ExPASy Swiss-Prot
Match: GPA1_ORYSI (Guanine nucleotide-binding protein alpha-1 subunit OS=Oryza sativa subsp. indica GN=GPA1 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 7.216e-19
Identity = 53/158 (33.54%), Postives = 92/158 (58.23%), Query Frame = 3
Query:    6 ISKTGYEPSDMDILYAEEITSTNGLLSMLFS-LPEQTQENSISDSSDQNDPLLSYQLIRVHPRSLGENCKWLQMFEDADMVLFCVSLTAYDEY-FEDSKGFLTNKMLASRQLFQNIVIHPTFNQKNFLLILNKYDMLEEKIEEVPLSRCEWFEDFNPV 473
            +++ GY P+  D+LYA     TNG++ + FS + E  +   +            Y+L  V  +   E  KW+ +FE  + V+FC +++ YD+  FED      N+M+ +++LF  ++    F + +F+L LNK+D+ E+KI++VPLS CEWF+D+ P+
Sbjct:  175 LAEAGYVPTKEDVLYAR--VRTNGVVQIQFSPVGENKRGGEV------------YRLYDVGGQR-NERRKWIHLFEGVNAVIFCAAISEYDQMLFEDET---KNRMMETKELFDWVLKQRCFEKTSFILFLNKFDIFEKKIQKVPLSVCEWFKDYQPI 314          
BLAST of DY305448 vs. ExPASy Swiss-Prot
Match: GPA1_LUPLU (Guanine nucleotide-binding protein alpha-1 subunit OS=Lupinus luteus GN=GPA1 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 9.424e-19
Identity = 69/228 (30.26%), Postives = 109/228 (47.81%), Query Frame = 3
Query:    6 ISKTGYEPSDMDILYAEEITSTNGLLSMLFSLPEQTQENSISDSSDQNDPLLSYQLIRVHPRSLGENCKWLQMFEDADMVLFCVSLTAYDE-YFEDSKGFLTNKMLASRQLFQNIVIHPTFNQKNFLLILNKYDMLEEKIEEVPLSRCEWFEDFNPVIXXXXXXXXXXXXXXPLAVSAAHYIAVKFKRLFDSLTG-----RKLFVSVVTALEPETVDEALKYAKEILK 671
            +S   Y P+  D+LYA     T G++ + FS      EN  S           Y+L  V  +   E  KW+ +FE    V+FC +++ YD+  FED      N+M  +++LF+ I+  P F + +F+L LNK+D+ E+KI +VPL+ CEWF+D+ PV                    A  ++  KF+ L+   T      R   V   TAL+ + + +  K   E L+
Sbjct:  175 LSDANYVPTKEDVLYAR--VRTTGVVEIQFS---PVGENKRSGEV--------YRLFDVGGQR-NERRKWIHLFEGVSAVIFCAAISEYDQTLFEDEN---KNRMTETKELFEWILKQPCFEKTSFMLFLNKFDIFEKKILKVPLNVCEWFKDYQPVSTGKQEIE-----------HAYEFVKKKFEELYFQSTAPERVDRVFKVYRTTALDQKLIKKTFKLVDESLR 374          
BLAST of DY305448 vs. ExPASy Swiss-Prot
Match: GPA1_LOTJA (Guanine nucleotide-binding protein alpha-1 subunit OS=Lotus japonicus GN=GPA1 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.100e-18
Identity = 55/157 (35.03%), Postives = 88/157 (56.05%), Query Frame = 3
Query:    6 ISKTGYEPSDMDILYAEEITSTNGLLSMLFSLPEQTQENSISDSSDQNDPLLSYQLIRVHPRSLGENCKWLQMFEDADMVLFCVSLTAYDE-YFEDSKGFLTNKMLASRQLFQNIVIHPTFNQKNFLLILNKYDMLEEKIEEVPLSRCEWFEDFNPV 473
            +S   Y P+  D+LYA     T G++ + FS      EN  S           Y+L  V  +   E  KW+ +FE    V+FC +++ YD+  FED      N+M+ +++LF+ ++  P F + +F+L LNK+D+ E+KI +VPL+ CEWF+D+ PV
Sbjct:  175 LSDANYVPTKDDVLYAR--VRTTGVVEIQFS---PVGENKKSGEV--------YRLFDVGGQR-NERRKWIHLFEGVSAVIFCAAISEYDQTLFEDEN---KNRMMETKELFEWVLKQPCFEKTSFMLFLNKFDIFEKKILKVPLNVCEWFKDYQPV 314          
BLAST of DY305448 vs. ExPASy Swiss-Prot
Match: GPA1_ARATH (Guanine nucleotide-binding protein alpha-1 subunit OS=Arabidopsis thaliana GN=GPA1 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.100e-18
Identity = 67/228 (29.39%), Postives = 109/228 (47.81%), Query Frame = 3
Query:    6 ISKTGYEPSDMDILYAEEITSTNGLLSMLFSLPEQTQENSISDSSDQNDPLLSYQLIRVHPRSLGENCKWLQMFEDADMVLFCVSLTAYDE-YFEDSKGFLTNKMLASRQLFQNIVIHPTFNQKNFLLILNKYDMLEEKIEEVPLSRCEWFEDFNPVIXXXXXXXXXXXXXXPLAVSAAHYIAVKFKRLFDSLTG-----RKLFVSVVTALEPETVDEALKYAKEILK 671
            +S   Y P+  D+LYA     T G++ + FS      EN  S           Y+L  V  +   E  KW+ +FE    V+FC +++ YD+  FED +    N+M+ +++LF  ++  P F + +F+L LNK+D+ E+K+ +VPL+ CEWF D+ PV                    A  ++  KF+ L+   T      R   +   TAL+ + V +  K   E L+
Sbjct:  174 LSDINYIPTKEDVLYAR--VRTTGVVEIQFS---PVGENKKSGEV--------YRLFDVGGQR-NERRKWIHLFEGVTAVIFCAAISEYDQTLFEDEQ---KNRMMETKELFDWVLKQPCFEKTSFMLFLNKFDIFEKKVLDVPLNVCEWFRDYQPVSSGKQEIE-----------HAYEFVKKKFEELYYQNTAPDRVDRVFKIYRTTALDQKLVKKTFKLVDETLR 373          
BLAST of DY305448 vs. ExPASy Swiss-Prot
Match: GPA2_PEA (Guanine nucleotide-binding protein alpha-2 subunit OS=Pisum sativum GN=GPA2 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 3.581e-18
Identity = 67/228 (29.39%), Postives = 108/228 (47.37%), Query Frame = 3
Query:    6 ISKTGYEPSDMDILYAEEITSTNGLLSMLFSLPEQTQENSISDSSDQNDPLLSYQLIRVHPRSLGENCKWLQMFEDADMVLFCVSLTAYDE-YFEDSKGFLTNKMLASRQLFQNIVIHPTFNQKNFLLILNKYDMLEEKIEEVPLSRCEWFEDFNPVIXXXXXXXXXXXXXXPLAVSAAHYIAVKFKRLF-----DSLTGRKLFVSVVTALEPETVDEALKYAKEILK 671
            +S   Y P+  D+LYA     T G++ + FS      EN  S           Y+L  V  +   E  KW+ +FE    V+FC +++ YD+  FED      N+++ +++LF+ I+  P F + +F+L LNK+D+ E+KI  VPL+ CEWF+D+ PV                    A  ++  KF+ L+          R   +   TAL+ + V +  K   E L+
Sbjct:  175 LSDANYVPTKGDVLYAR--VRTTGVVEIQFS---PVGENKRSGEV--------YRLFDVGGQR-NERRKWIHLFEGVTAVIFCAAISEYDQTLFEDES---KNRLMETKELFEWILKQPCFEKTSFMLFLNKFDIFEKKILNVPLNVCEWFKDYQPVSSGKQEIE-----------HAYEFVKKKFEELYFQSSAPDRVDRVFKIYRTTALDQKVVKKTFKLVDETLR 374          
BLAST of DY305448 vs. ExPASy Swiss-Prot
Match: GPA1_PEA (Guanine nucleotide-binding protein alpha-1 subunit OS=Pisum sativum GN=GPA1 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.032e-17
Identity = 54/157 (34.39%), Postives = 87/157 (55.41%), Query Frame = 3
Query:    6 ISKTGYEPSDMDILYAEEITSTNGLLSMLFSLPEQTQENSISDSSDQNDPLLSYQLIRVHPRSLGENCKWLQMFEDADMVLFCVSLTAYDE-YFEDSKGFLTNKMLASRQLFQNIVIHPTFNQKNFLLILNKYDMLEEKIEEVPLSRCEWFEDFNPV 473
            +S   Y P+  D+L A     T G++ + FS      EN  S           Y+L  V  +   E  KW+ +FE    V+FCV+++ YD+  FED      N+M+ +++LF+ ++    F + +F+L LNK+D+ E+KI +VPL+ CEWF+D+ PV
Sbjct:  175 LSDANYVPTKEDVLLAR--VRTTGVVEIQFS---PVGENKKSGEV--------YRLFDVGGQR-NERRKWIHLFEGVSAVIFCVAISEYDQTLFEDEN---KNRMMETKELFEWVLKQQCFEKTSFMLFLNKFDIFEKKILDVPLNVCEWFKDYQPV 314          
BLAST of DY305448 vs. ExPASy Swiss-Prot
Match: GPA1_SOLLC (Guanine nucleotide-binding protein alpha-1 subunit OS=Solanum lycopersicum GN=GPA1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 5.171e-17
Identity = 52/156 (33.33%), Postives = 87/156 (55.77%), Query Frame = 3
Query:    9 SKTGYEPSDMDILYAEEITSTNGLLSMLFSLPEQTQENSISDSSDQNDPLLSYQLIRVHPRSLGENCKWLQMFEDADMVLFCVSLTAYDE-YFEDSKGFLTNKMLASRQLFQNIVIHPTFNQKNFLLILNKYDMLEEKIEEVPLSRCEWFEDFNPV 473
            S   Y P+  D+L+A     T G++ + FS      EN  S           Y+L  V  +   E  KW+ +FE    V+FC +++ YD+  FED +    N+M+ +++LF+ ++  P F + +F+L LNK+D+ E+K+ +VPL+ CEWF+D+  V
Sbjct:  176 SDVHYIPTKEDVLFAR--IRTTGVVEIQFS---PVGENKKSGEV--------YRLFDVGGQR-NERRKWIHLFEGVTAVIFCAAISEYDQTLFEDER---KNRMMETKELFEWVLKQPCFEKTSFMLFLNKFDIFEQKVPKVPLNACEWFKDYQSV 314          
BLAST of DY305448 vs. ExPASy Swiss-Prot
Match: GPA1_SOLTU (Guanine nucleotide-binding protein alpha-1 subunit OS=Solanum tuberosum GN=GPA1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.152e-16
Identity = 51/152 (33.55%), Postives = 86/152 (56.58%), Query Frame = 3
Query:   21 YEPSDMDILYAEEITSTNGLLSMLFSLPEQTQENSISDSSDQNDPLLSYQLIRVHPRSLGENCKWLQMFEDADMVLFCVSLTAYDE-YFEDSKGFLTNKMLASRQLFQNIVIHPTFNQKNFLLILNKYDMLEEKIEEVPLSRCEWFEDFNPV 473
            Y P+  D+L+A     T G++ + FS      EN  S           Y+L  V  +   E  KW+ +FE    V+FC +++ YD+  FED +    N+M+ +++LF+ ++  P F + +F+L LNK+D+ E+K+ +VPL+ CEWF+D+  V
Sbjct:  180 YIPTKEDVLFAR--IRTTGVVEIQFS---PVGENKKSGEV--------YRLFDVGGQR-NERRKWIHLFEGVTAVIFCAAISEYDQTLFEDER---KNRMMETKELFEWVLKQPCFEKTSFMLFLNKFDIFEQKVLKVPLNTCEWFKDYQSV 314          
The following BLAST results are available for this feature:
BLAST of DY305448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
GPA2_SOYBN1.899e-1936.31Guanine nucleotide-binding protein alpha-2 subunit... [more]
GPA1_ORYSJ7.216e-1933.54Guanine nucleotide-binding protein alpha-1 subunit... [more]
GPA1_ORYSI7.216e-1933.54Guanine nucleotide-binding protein alpha-1 subunit... [more]
GPA1_LUPLU9.424e-1930.26Guanine nucleotide-binding protein alpha-1 subunit... [more]
GPA1_LOTJA2.100e-1835.03Guanine nucleotide-binding protein alpha-1 subunit... [more]
GPA1_ARATH2.100e-1829.39Guanine nucleotide-binding protein alpha-1 subunit... [more]
GPA2_PEA3.581e-1829.39Guanine nucleotide-binding protein alpha-2 subunit... [more]
GPA1_PEA3.032e-1734.39Guanine nucleotide-binding protein alpha-1 subunit... [more]
GPA1_SOLLC5.171e-1733.33Guanine nucleotide-binding protein alpha-1 subunit... [more]
GPA1_SOLTU1.152e-1633.55Guanine nucleotide-binding protein alpha-1 subunit... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1AB02RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305448 ID=DY305448; Name=DY305448; organism=Citrus sinensis; type=EST; length=1286bp
GTGAGATTTCAAAGACAGGCTATGAGCCCTCAGATATGGATATCTTGTAT
GCTGAGGAAATTACGTCAACCAATGGGCTTTTGTCCATGTTATTTTCATT
ACCAGAGCAAACACAAGAGAACTCCATAAGTGACTCTTCCGATCAGAATG
ATCCCTTGCTCAGCTATCAACTCATTAGAGTGCATCCAAGAAGCCTCGGG
GAGAACTGCAAGTGGCTACAAATGTTTGAAGATGCTGATATGGTCCTCTT
TTGTGTTTCTTTGACTGCCTACGATGAATATTTTGAAGATAGCAAAGGAT
TTCTCACCAACAAGATGTTGGCAAGCAGGCAGCTCTTCCAAAACATTGTC
ATTCATCCAACCTTCAATCAAAAGAACTTCCTTCTGATACTCAACAAGTA
TGATATGTTAGAGGAAAAGATTGAAGAAGTTCCTCTCTCTCGATGTGAGT
GGTTTGAAGACTTCAATCCGGTGATCAGCCATAATCACCATAGCACTAGT
AGAAGAACTAGCAACACACCACTGGCTGTATCTGCTGCCCACTACATTGC
AGTGAAGTTCAAGAGGTTGTTCGATTCTCTAACTGGTCGTAAGTTGTTTG
TTTCAGTAGTTACTGCCTTGGAGCCTGAGACTGTAGATGAAGCTCTCAAA
TATGCAAAGGAGATTCTGAAGTGGGAGGAAGAGGAACCTGTCTACACTAA
CATTGAGTCAACTGATTACGAGGCAAGCTCATCATCGTGAATTTTCTTCT
CGGGTTGAATTTTGCTCATCCATCCTCAGTTATACAAAACATTAAAAAGG
ATTTTATTTTTTCCAAAATAGAACTGAAGAACATCAGAAGAAAATACCTA
GGGTCAAGCCCATGCTTGGGTTATCTAATCCAGATTTGGATAAAAATTAG
GGGAAATAAGAATCTTTTCATAAACTTTTAAAAAATTTCCCTTTTGCCTT
TTTCAAAAAAAAAAAAAAAAAAAATCGAAGGGGGGGCCCCGGGTACCCAA
TTTCCCCCTAAAATGGATCCATATTCTATTTCCCTGGCCGCCTCTTTTTC
AACCGTCGTGAAAGGGGAAAACCCTTTGAGGTAAACACACTTTTACTCCC
TCTTTCACCCCATCCCTCCCTTCTTCCCCCCGCGGCGAAAATAAACAAAA
AAAAGCCCCCCCCACAATCTACCCTCTTCTCCCCAAAAGTGTTCCCCCCC
CCCCTAGTGGGGGGGAGAAAGAGTGAAAATTTTATATAAGCCCAGTTTTA
ATATATTATTTTTTTTTTATTAAATTATTCTCCCTC
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