EY702497

Overview
NameEY702497
Unique NameEY702497
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length940
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY702497_ssr263 microsatellite EY702497_ssr263:263..274. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY702497 vs. ExPASy Swiss-Prot
Match: DRP1B_ARATH (Dynamin-related protein 1B OS=Arabidopsis thaliana GN=DRP1B PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 5.747e-73
Identity = 98/133 (73.68%), Postives = 110/133 (82.71%), Query Frame = 3
Query:  309 MDNLITLVNKIQRACTALGDHGEESAVPTLWDSLPSIAXXXXXXXXXXXXLESVVGKDFLPRGSGIVTRRPLVLQLHKIQEGKEYAEFMHLPRKRFNDFAAVRKEISDETDRETGR-SKAISTGSLSIKDIFS 704
            M++LI LVNKIQRACTALGDHGE S++PTLWDSLP+IA            LESVVGKDFLPRG+GIVTRRPLVLQLH+I EGKEYAEFMHLP+K+F DFAAVR+EISDETDRETGR SK IST  + +  IFS
Sbjct:    1 MESLIALVNKIQRACTALGDHGEGSSLPTLWDSLPAIAVVGGQSSGKSSVLESVVGKDFLPRGAGIVTRRPLVLQLHRIDEGKEYAEFMHLPKKKFTDFAAVRQEISDETDRETGRSSKVISTVPIHL-SIFS 132          

HSP 2 Score: 108.227 bits (269), Expect = 5.747e-73
Identity = 56/79 (70.89%), Postives = 62/79 (78.48%), Query Frame = 1
Query:  679 PYPLRIFSPNGGNLTLIDLPGPTTVAVDGPPESIVPDIENMGKPYIGKPICIILAISPGNQDLGTSNAIKSPRKVDPEG 915
            P  L IFSPN  NLTL+DLPG T VAVDG PESIV DIENM + +I KP CIILAISP NQDL TS+AIK  R+VDP+G
Sbjct:  125 PIHLSIFSPNVVNLTLVDLPGLTKVAVDGQPESIVQDIENMVRSFIEKPNCIILAISPANQDLATSDAIKISREVDPKG 203          
BLAST of EY702497 vs. ExPASy Swiss-Prot
Match: SDL5A_SOYBN (Dynamin-related protein 5A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 7.495e-73
Identity = 97/123 (78.86%), Postives = 105/123 (85.37%), Query Frame = 3
Query:  309 MDNLITLVNKIQRACTALGDHGEESAVPTLWDSLPSIAXXXXXXXXXXXXLESVVGKDFLPRGSGIVTRRPLVLQLHKIQEG-KEYAEFMHLPRKRFNDFAAVRKEISDETDRETGRSKAIST 674
            M+NLI+LVNKIQRACTALGDHGE SA+PTLWDSLP+IA            LESVVGKDFLPRGSGIVTRRPLVLQLHKI+EG +EYAEF+HLPRKRF DF AVRKEI DETDRETGR+K IST
Sbjct:    1 MENLISLVNKIQRACTALGDHGENSALPTLWDSLPAIAVVGGQSSGKSSVLESVVGKDFLPRGSGIVTRRPLVLQLHKIEEGSREYAEFLHLPRKRFTDFVAVRKEIQDETDRETGRTKQIST 123          

HSP 2 Score: 103.99 bits (258), Expect = 7.495e-73
Identity = 55/85 (64.71%), Postives = 63/85 (74.12%), Query Frame = 1
Query:  661 KQSLLGPYPLRIFSPNGGNLTLIDLPGPTTVAVDGPPESIVPDIENMGKPYIGKPICIILAISPGNQDLGTSNAIKSPRKVDPEG 915
            KQ    P  L I+SPN  NLTL+DLPG T VAV+G P+SIV DIE+M + YI KP CIILAISP NQDL TS+AIK  R+VDP G
Sbjct:  119 KQISTVPIHLSIYSPNVVNLTLVDLPGLTKVAVEGQPDSIVKDIEDMVRSYIEKPNCIILAISPANQDLATSDAIKISREVDPTG 203          
BLAST of EY702497 vs. ExPASy Swiss-Prot
Match: SDLCA_SOYBN (Dynamin-related protein 12A OS=Glycine max PE=1 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 3.688e-72
Identity = 96/123 (78.05%), Postives = 104/123 (84.55%), Query Frame = 3
Query:  309 MDNLITLVNKIQRACTALGDHGEESAVPTLWDSLPSIAXXXXXXXXXXXXLESVVGKDFLPRGSGIVTRRPLVLQLHKIQEG-KEYAEFMHLPRKRFNDFAAVRKEISDETDRETGRSKAIST 674
            M+NLI+LVNKIQRACTALGDHGE SA+PTLWDSLP+IA            LESVVGKDFLPRGSGIVTRRPLVLQLHKI EG +EYAEF+HLPRKRF DF AVRKEI DETDRETGR+K IS+
Sbjct:    1 MENLISLVNKIQRACTALGDHGENSALPTLWDSLPAIAVVGGQSSGKSSVLESVVGKDFLPRGSGIVTRRPLVLQLHKIDEGSREYAEFLHLPRKRFTDFVAVRKEIQDETDRETGRTKQISS 123          

HSP 2 Score: 103.99 bits (258), Expect = 3.688e-72
Identity = 56/85 (65.88%), Postives = 63/85 (74.12%), Query Frame = 1
Query:  661 KQSLLGPYPLRIFSPNGGNLTLIDLPGPTTVAVDGPPESIVPDIENMGKPYIGKPICIILAISPGNQDLGTSNAIKSPRKVDPEG 915
            KQ    P  L I+SPN  NLTLIDLPG T VAV+G P+SIV DIE+M + YI KP CIILAISP NQDL TS+AIK  R+VDP G
Sbjct:  119 KQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVKDIEDMVRSYIEKPNCIILAISPANQDLATSDAIKISREVDPTG 203          
BLAST of EY702497 vs. ExPASy Swiss-Prot
Match: DRP1A_ARATH (Dynamin-related protein 1A OS=Arabidopsis thaliana GN=DRP1A PE=1 SV=3)

HSP 1 Score: 187.578 bits (475), Expect = 1.391e-71
Identity = 94/123 (76.42%), Postives = 105/123 (85.37%), Query Frame = 3
Query:  309 MDNLITLVNKIQRACTALGDHGEESAVPTLWDSLPSIAXXXXXXXXXXXXLESVVGKDFLPRGSGIVTRRPLVLQLHKIQEG-KEYAEFMHLPRKRFNDFAAVRKEISDETDRETGRSKAIST 674
            M+NLI+LVNKIQRACTALGDHG+ SA+PTLWDSLP+IA            LES+VGKDFLPRGSGIVTRRPLVLQL KI +G +EYAEF+HLPRK+F DFAAVRKEI DETDRETGRSKAIS+
Sbjct:    1 MENLISLVNKIQRACTALGDHGDSSALPTLWDSLPAIAVVGGQSSGKSSVLESIVGKDFLPRGSGIVTRRPLVLQLQKIDDGTREYAEFLHLPRKKFTDFAAVRKEIQDETDRETGRSKAISS 123          

HSP 2 Score: 104.375 bits (259), Expect = 1.391e-71
Identity = 55/79 (69.62%), Postives = 60/79 (75.95%), Query Frame = 1
Query:  679 PYPLRIFSPNGGNLTLIDLPGPTTVAVDGPPESIVPDIENMGKPYIGKPICIILAISPGNQDLGTSNAIKSPRKVDPEG 915
            P  L I+SPN  NLTLIDLPG T VAVDG  +SIV DIENM + YI KP CIILAISP NQDL TS+AIK  R+VDP G
Sbjct:  125 PIHLSIYSPNVVNLTLIDLPGLTKVAVDGQSDSIVKDIENMVRSYIEKPNCIILAISPANQDLATSDAIKISREVDPSG 203          
BLAST of EY702497 vs. ExPASy Swiss-Prot
Match: DRP1C_ARATH (Dynamin-related protein 1C OS=Arabidopsis thaliana GN=DRP1C PE=1 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 3.626e-63
Identity = 81/122 (66.39%), Postives = 94/122 (77.05%), Query Frame = 3
Query:  309 MDNLITLVNKIQRACTALGDHGEESAVPTLWDSLPSIAXXXXXXXXXXXXLESVVGKDFLPRGSGIVTRRPLVLQLHKIQEG-KEYAEFMHLPRKRFNDFAAVRKEISDETDRETGRSKAIS 671
            M +LI L+NKIQRACT LGDHG E    +LW++LP++A            LESVVG+DFLPRGSGIVTRRPLVLQLHK ++G  EYAEF+H P+KRF DFAAVRKEI DETDR TG+SK IS
Sbjct:    4 MKSLIGLINKIQRACTVLGDHGGEGM--SLWEALPTVAVVGGQSSGKSSVLESVVGRDFLPRGSGIVTRRPLVLQLHKTEDGTTEYAEFLHAPKKRFADFAAVRKEIEDETDRITGKSKQIS 123          

HSP 2 Score: 107.457 bits (267), Expect = 3.626e-63
Identity = 55/79 (69.62%), Postives = 61/79 (77.22%), Query Frame = 1
Query:  679 PYPLRIFSPNGGNLTLIDLPGPTTVAVDGPPESIVPDIENMGKPYIGKPICIILAISPGNQDLGTSNAIKSPRKVDPEG 915
            P  L I+SPN  NLTLIDLPG T VAVDG PESIV DIENM + Y+ KP CIILAISP NQD+ TS+AIK  R+VDP G
Sbjct:  126 PIQLSIYSPNVVNLTLIDLPGLTKVAVDGQPESIVQDIENMVRSYVEKPNCIILAISPANQDIATSDAIKLAREVDPTG 204          
BLAST of EY702497 vs. ExPASy Swiss-Prot
Match: DRP1E_ARATH (Dynamin-related protein 1E OS=Arabidopsis thaliana GN=DRP1E PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 1.765e-59
Identity = 77/127 (60.63%), Postives = 97/127 (76.38%), Query Frame = 3
Query:  303 TLMDNLITLVNKIQRACTALGDHGE---ESAVPTLWDSLPSIAXXXXXXXXXXXXLESVVGKDFLPRGSGIVTRRPLVLQLHKIQEG-KEYAEFMHLPRKRFNDFAAVRKEISDETDRETGRSKAIS 671
            T M++LI LVN+IQRACT LGD+G     +A  +LW++LP++A            LES+VG+DFLPRGSGIVTRRPLVLQLHK  +G +EYAEF+HLP+K+F DFA VR+EI DETDR TG++K IS
Sbjct:    2 TTMESLIGLVNRIQRACTVLGDYGGGTGSNAFNSLWEALPTVAVVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVLQLHKTDDGTEEYAEFLHLPKKQFTDFALVRREIQDETDRITGKNKQIS 128          

HSP 2 Score: 100.138 bits (248), Expect = 1.765e-59
Identity = 52/90 (57.78%), Postives = 63/90 (70.00%), Query Frame = 1
Query:  652 VVRKQSLLGPYP--LRIFSPNGGNLTLIDLPGPTTVAVDGPPESIVPDIENMGKPYIGKPICIILAISPGNQDLGTSNAIKSPRKVDPEG 915
            +  K   + P P  L I+SPN  NLTLIDLPG T VAV+G PE+I  DIE+M + Y+ KP CIILAISP NQD+ TS+AIK  + VDP G
Sbjct:  120 ITGKNKQISPVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPETIAEDIESMVRTYVDKPNCIILAISPANQDIATSDAIKLAKDVDPTG 209          
BLAST of EY702497 vs. ExPASy Swiss-Prot
Match: DRP1D_ARATH (Dynamin-related protein 1D OS=Arabidopsis thaliana GN=DRP1D PE=2 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 9.438e-58
Identity = 74/124 (59.68%), Postives = 94/124 (75.81%), Query Frame = 3
Query:  309 MDNLITLVNKIQRACTALGDHGEES-AVPTLWDSLPSIAXXXXXXXXXXXXLESVVGKDFLPRGSGIVTRRPLVLQLHKIQEGKE-YAEFMHLPRKRFNDFAAVRKEISDETDRETGRSKAIST 674
            M++LI L+N IQRACT +GDHG +S A+ +LW++LPS+A            LES+VG+DFLPRGSGIVTRRPLVLQLHK + G E  AEF+HL  K+F +F+ VRKEI DETDR TG++K IS+
Sbjct:    1 MESLIVLINTIQRACTVVGDHGGDSNALSSLWEALPSVAVVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVLQLHKTENGTEDNAEFLHLTNKKFTNFSLVRKEIEDETDRITGKNKQISS 124          

HSP 2 Score: 99.7525 bits (247), Expect = 9.438e-58
Identity = 50/79 (63.29%), Postives = 61/79 (77.22%), Query Frame = 1
Query:  679 PYPLRIFSPNGGNLTLIDLPGPTTVAVDGPPESIVPDIENMGKPYIGKPICIILAISPGNQDLGTSNAIKSPRKVDPEG 915
            P  L IFSPN  NLTLIDLPG T VAV+G PE+IV DIE+M + Y+ KP C+ILAISP NQD+ TS+A+K  ++VDP G
Sbjct:  126 PIHLSIFSPNVVNLTLIDLPGLTKVAVEGQPETIVEDIESMVRSYVEKPNCLILAISPANQDIATSDAMKLAKEVDPIG 204          
BLAST of EY702497 vs. ExPASy Swiss-Prot
Match: DYN_DROME (Dynamin OS=Drosophila melanogaster GN=shi PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 1.712e-40
Identity = 64/128 (50.00%), Postives = 81/128 (63.28%), Query Frame = 3
Query:  309 MDNLITLVNKIQRACTALGDHGEESAVPTLWDSLPSIAXXXXXXXXXXXXLESVVGKDFLPRGSGIVTRRPLVLQLHKIQEGKEYAEFMHLPRKRFNDFAAVRKEISDETDRETGRSKAISTGSLSIK 692
            MD+LIT+VNK+Q A T+LG H +          LP IA            LE+ VGKDFLPRGSGIVTRRPL+LQL  I    EY EF+H+  K+F+ F  +RKEI DETDR TG +K IS   ++++
Sbjct:    1 MDSLITIVNKLQDAFTSLGVHMQLD--------LPQIAVVGGQSAGKSSVLENFVGKDFLPRGSGIVTRRPLILQL--INGVTEYGEFLHIKGKKFSSFDEIRKEIEDETDRVTGSNKGISNIPINLR 118          

HSP 2 Score: 75.8702 bits (185), Expect = 1.712e-40
Identity = 38/79 (48.10%), Postives = 52/79 (65.82%), Query Frame = 1
Query:  679 PYPLRIFSPNGGNLTLIDLPGPTTVAVDGPPESIVPDIENMGKPYIGKPICIILAISPGNQDLGTSNAIKSPRKVDPEG 915
            P  LR++SP+  NLTLIDLPG T VA+   P  I   I+ M   +I K  C+ILA++P N DL  S+A+K  ++VDP+G
Sbjct:  114 PINLRVYSPHVLNLTLIDLPGLTKVAIGDQPVDIEQQIKQMIFQFIRKETCLILAVTPANTDLANSDALKLAKEVDPQG 192          
BLAST of EY702497 vs. ExPASy Swiss-Prot
Match: DYN1_MOUSE (Dynamin-1 OS=Mus musculus GN=Dnm1 PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.275e-37
Identity = 60/128 (46.88%), Postives = 78/128 (60.94%), Query Frame = 3
Query:  309 MDNLITLVNKIQRACTALGDHGEESAVPTLWDSLPSIAXXXXXXXXXXXXLESVVGKDFLPRGSGIVTRRPLVLQLHKIQEGKEYAEFMHLPRKRFNDFAAVRKEISDETDRETGRSKAISTGSLSIK 692
            M++LI LVN++Q A +A+G + +          LP IA            LE+ VG+DFLPRGSGIVTRRPLVLQL  +    EYAEF+H   K+F DF  VR EI  ETDR TG +K IS   ++++
Sbjct:    6 MEDLIPLVNRLQDAFSAIGQNADLD--------LPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQL--VNSTTEYAEFLHCKGKKFTDFEEVRLEIEAETDRVTGTNKGISPVPINLR 123          

HSP 2 Score: 74.7146 bits (182), Expect = 1.275e-37
Identity = 37/79 (46.84%), Postives = 51/79 (64.56%), Query Frame = 1
Query:  679 PYPLRIFSPNGGNLTLIDLPGPTTVAVDGPPESIVPDIENMGKPYIGKPICIILAISPGNQDLGTSNAIKSPRKVDPEG 915
            P  LR++SP+  NLTL+DLPG T V V   P  I   I +M   ++ K  C+ILA+SP N DL  S+A+K  ++VDP+G
Sbjct:  119 PINLRVYSPHVLNLTLVDLPGMTKVPVGDQPPDIEFQIRDMLMQFVTKENCLILAVSPANSDLANSDALKIAKEVDPQG 197          
BLAST of EY702497 vs. ExPASy Swiss-Prot
Match: DYN1_RAT (Dynamin-1 OS=Rattus norvegicus GN=Dnm1 PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.275e-37
Identity = 60/128 (46.88%), Postives = 78/128 (60.94%), Query Frame = 3
Query:  309 MDNLITLVNKIQRACTALGDHGEESAVPTLWDSLPSIAXXXXXXXXXXXXLESVVGKDFLPRGSGIVTRRPLVLQLHKIQEGKEYAEFMHLPRKRFNDFAAVRKEISDETDRETGRSKAISTGSLSIK 692
            M++LI LVN++Q A +A+G + +          LP IA            LE+ VG+DFLPRGSGIVTRRPLVLQL  +    EYAEF+H   K+F DF  VR EI  ETDR TG +K IS   ++++
Sbjct:    6 MEDLIPLVNRLQDAFSAIGQNADLD--------LPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQL--VNSTTEYAEFLHCKGKKFTDFEEVRLEIEAETDRVTGTNKGISPVPINLR 123          

HSP 2 Score: 74.7146 bits (182), Expect = 1.275e-37
Identity = 37/79 (46.84%), Postives = 51/79 (64.56%), Query Frame = 1
Query:  679 PYPLRIFSPNGGNLTLIDLPGPTTVAVDGPPESIVPDIENMGKPYIGKPICIILAISPGNQDLGTSNAIKSPRKVDPEG 915
            P  LR++SP+  NLTL+DLPG T V V   P  I   I +M   ++ K  C+ILA+SP N DL  S+A+K  ++VDP+G
Sbjct:  119 PINLRVYSPHVLNLTLVDLPGMTKVPVGDQPPDIEFQIRDMLMQFVTKENCLILAVSPANSDLANSDALKIAKEVDPQG 197          
The following BLAST results are available for this feature:
BLAST of EY702497 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
DRP1B_ARATH5.747e-7373.68Dynamin-related protein 1B OS=Arabidopsis thaliana... [more]
SDL5A_SOYBN7.495e-7378.86Dynamin-related protein 5A OS=Glycine max PE=2 SV=... [more]
SDLCA_SOYBN3.688e-7278.05Dynamin-related protein 12A OS=Glycine max PE=1 SV... [more]
DRP1A_ARATH1.391e-7176.42Dynamin-related protein 1A OS=Arabidopsis thaliana... [more]
DRP1C_ARATH3.626e-6366.39Dynamin-related protein 1C OS=Arabidopsis thaliana... [more]
DRP1E_ARATH1.765e-5960.63Dynamin-related protein 1E OS=Arabidopsis thaliana... [more]
DRP1D_ARATH9.438e-5859.68Dynamin-related protein 1D OS=Arabidopsis thaliana... [more]
DYN_DROME1.712e-4050.00Dynamin OS=Drosophila melanogaster GN=shi PE=1 SV=... [more]
DYN1_MOUSE1.275e-3746.88Dynamin-1 OS=Mus musculus GN=Dnm1 PE=1 SV=2[more]
DYN1_RAT1.275e-3746.88Dynamin-1 OS=Rattus norvegicus GN=Dnm1 PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-F08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702497 ID=EY702497; Name=EY702497; organism=Citrus sinensis; type=EST; length=940bp
AACATGGTAGCCTGCAGTACCCGTCCGGAATCCCTTCCCAACCACGCGTC
CGATTGAAAGAATTGCTGGTTGTTACCGTTAGAAATTTCCGCGGGCTCCG
CCTCTCACGTCGAACTGTTCTATCTCCCCGGTTCGTTCACCGATCCAAAA
TCAACATGGCCAATCCCTCCTGCCTGGCGTTTCTTTCTCTTTCCAAAGCC
AAAATTTCAAATCAATACATCCGATAAACAACCCCCCGAGTCGACTCACT
ATCCGAGTCACACACCACCACCACCAATCAACTCAGCGATCAGAATCAGT
CCACACTCATGGATAATTTGATCACATTAGTGAATAAGATTCAAAGAGCG
TGTACGGCCCTAGGCGATCACGGCGAAGAAAGCGCGGTGCCCACTCTCTG
GGACTCCTTACCTTCCATCGCCGTTGTCGGTGGCCAGAGCTCTGGAAAGT
CTTCAGTGTTGGAAAGTGTTGTTGGAAAAGACTTTTTGCCTCGTGGATCA
GGGATTGTTACTCGGAGACCTCTAGTCTTGCAGCTTCATAAGATTCAAGA
AGGAAAAGAATATGCAGAGTTTATGCATCTTCCAAGAAAGAGGTTCAATG
ACTTCGCTGCTGTGAGGAAAGAGATTTCTGATGAGACTGATCGAGAGACT
GGTCGTTCGAAAGCAATCTCTACTGGGTCCCTATCCATTAAGGATATTTT
CTCCTAATGGTGGGAACTTGACCCTGATTGATCTTCCTGGACCTACAACA
GTTGCTGTTGACGGGCCACCTGAGAGCATCGTGCCAGACATCGAAAATAT
GGGTAAGCCCTATATTGGAAAGCCCATTTGTATTATTCTGGCAATTTCTC
CTGGCAATCAGGACCTTGGCACTTCGAATGCAATAAAATCCCCCCGGAAG
GTGGACCCCGAGGGGGGATTTATAAAATTCTCTGGACCCT
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