EY702496

Overview
NameEY702496
Unique NameEY702496
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length870
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY702496_ssr344 microsatellite EY702496_ssr344:344..353. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY702496 vs. ExPASy Swiss-Prot
Match: GDL67_ARATH (GDSL esterase/lipase At4g28780 OS=Arabidopsis thaliana GN=At4g28780 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.411e-35
Identity = 80/139 (57.55%), Postives = 88/139 (63.31%), Query Frame = 2
Query:  143 FFGVGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISWVLLIDHILNLCVVCYIYM*LFFIV**LD*L*HINMCVRICAGQHIGSEPTLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVS 559
            FF  GDSLVD+GNNNYL TTARADSPPYGIDYPT RPTGRFSNGLN+PD IS                                           + IGSEPTLP LSPELTG +LL+GANFASAGIGILNDTG+QF++
Sbjct:   32 FFVFGDSLVDSGNNNYLVTTARADSPPYGIDYPTGRPTGRFSNGLNLPDIIS-------------------------------------------EQIGSEPTLPILSPELTGEKLLIGANFASAGIGILNDTGVQFLN 127          
BLAST of EY702496 vs. ExPASy Swiss-Prot
Match: LTL1_ARATH (GDSL esterase/lipase LTL1 OS=Arabidopsis thaliana GN=LTL1 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.252e-33
Identity = 80/139 (57.55%), Postives = 84/139 (60.43%), Query Frame = 2
Query:  143 FFGVGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISWVLLIDHILNLCVVCYIYM*LFFIV**LD*L*HINMCVRICAGQHIGSEPTLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVS 559
            FF  GDSLVDNGNN+YL TTARAD+ PYGIDYPTRRPTGRFSNGLNIPD IS                                           + IG   TLPYLSP LTG  LLVGANFASAGIGILNDTGIQFV+
Sbjct:   30 FFVFGDSLVDNGNNDYLVTTARADNYPYGIDYPTRRPTGRFSNGLNIPDIIS-------------------------------------------EAIGMPSTLPYLSPHLTGENLLVGANFASAGIGILNDTGIQFVN 125          
BLAST of EY702496 vs. ExPASy Swiss-Prot
Match: GDL77_ARATH (GDSL esterase/lipase At5g18430 OS=Arabidopsis thaliana GN=At5g18430 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.841e-33
Identity = 80/145 (55.17%), Postives = 87/145 (60.00%), Query Frame = 2
Query:  143 FFGVGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISWVLLIDHILNLCVVCYIYM*LFFIV**LD*L*HINMCVRICAGQHIGS-EPTLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVSPVHTY 574
            FF  GDSLVD+GNNNYL TTARADSPPYGID+PTRRPTGRFSNGLNIPD IS                                           + IG+ EP LPYLSPEL G  LL GANFASAGIGILNDTG QF++ +  Y
Sbjct:   29 FFVFGDSLVDSGNNNYLVTTARADSPPYGIDFPTRRPTGRFSNGLNIPDLIS-------------------------------------------EAIGNEEPPLPYLSPELRGRSLLNGANFASAGIGILNDTGFQFINIIRMY 130          
BLAST of EY702496 vs. ExPASy Swiss-Prot
Match: GDL79_ARATH (GDSL esterase/lipase At5g33370 OS=Arabidopsis thaliana GN=At5g33370 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.157e-29
Identity = 72/139 (51.80%), Postives = 82/139 (58.99%), Query Frame = 2
Query:  143 FFGVGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISWVLLIDHILNLCVVCYIYM*LFFIV**LD*L*HINMCVRICAGQHIGSEPTLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVS 559
            F   GDSLVDNGNN++LATTARAD+ PYGID+PT RPTGRFSNGLNIPD IS                                           +H+G E  +PYLSP L   +LL GANFASAGIGILNDTGIQF++
Sbjct:   31 FLVFGDSLVDNGNNDFLATTARADNYPYGIDFPTHRPTGRFSNGLNIPDLIS-------------------------------------------EHLGQESPMPYLSPMLKKDKLLRGANFASAGIGILNDTGIQFLN 126          
BLAST of EY702496 vs. ExPASy Swiss-Prot
Match: GDL81_ARATH (GDSL esterase/lipase At5g41890 OS=Arabidopsis thaliana GN=At5g41890 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.588e-13
Identity = 49/143 (34.27%), Postives = 66/143 (46.15%), Query Frame = 2
Query:  146 FGVGDSLVDNGNNNYLATTARADSPPYGIDY--PTRRPTGRFSNGLNIPDFISWVLLIDHILNLCVVCYIYM*LFFIV**LD*L*HINMCVRICAGQHIGSE-PTLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVSPV 565
            F  GDSLVD GNNNY+ T ++ADS PYGID+     +PTGRF+NG  I D +                                           G+ +G++ P  PYL P    + +  G N+AS   GIL+DTG+ F+  V
Sbjct:   27 FIFGDSLVDVGNNNYIFTLSKADSSPYGIDFAPSNGQPTGRFTNGRTISDIV-------------------------------------------GEALGAKSPPPPYLEPNTEANTIRNGINYASGAAGILDDTGLLFIGRV 126          
BLAST of EY702496 vs. ExPASy Swiss-Prot
Match: GDL64_ARATH (GDSL esterase/lipase At4g16230 OS=Arabidopsis thaliana GN=At4g16230 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 4.415e-13
Identity = 52/136 (38.24%), Postives = 63/136 (46.32%), Query Frame = 2
Query:  146 FGVGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISWVLLIDHILNLCVVCYIYM*LFFIV**LD*L*HINMCVRICAGQHIGSEPTLPYLSPELTGSRLLVGANFASAGIGILNDTGIQF 553
            F  GDSLVD GNNNYLAT ++A+  P GID+ +  PTGRF+NG  I D +   L  D                                          E T PYL+P  +GS +L G N+AS G GILN TG  F
Sbjct:   32 FVFGDSLVDAGNNNYLATLSKANYVPNGIDFGS--PTGRFTNGRTIVDIVYQALGSD------------------------------------------ELTPPYLAPTTSGSLILNGVNYASGGSGILNSTGKLF 123          
BLAST of EY702496 vs. ExPASy Swiss-Prot
Match: GDL37_ARATH (GDSL esterase/lipase At2g19060 OS=Arabidopsis thaliana GN=At2g19060 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.423e-11
Identity = 35/59 (59.32%), Postives = 42/59 (71.19%), Query Frame = 2
Query:  143 FFGVGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISWVLLIDH 319
            +F  GDS+ DNGNNN L T A+ +  PYGID+  R PTGRFSNG NIPDFI+  L I +
Sbjct:   31 YFVFGDSVFDNGNNNELDTLAKVNYSPYGIDF-ARGPTGRFSNGRNIPDFIAEELRISY 88          
BLAST of EY702496 vs. ExPASy Swiss-Prot
Match: GDL75_ARATH (GDSL esterase/lipase At5g08460 OS=Arabidopsis thaliana GN=At5g08460 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.133e-11
Identity = 34/59 (57.63%), Postives = 42/59 (71.19%), Query Frame = 2
Query:  146 FGVGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISWVLLIDHI 322
            F  GDSLVDNGNNN+L + AR++  PYGID+   +PTGRFSNG  I DFI  +L +  I
Sbjct:   51 FVFGDSLVDNGNNNHLNSLARSNYLPYGIDFAGNQPTGRFSNGKTIVDFIGELLGLPEI 109          
The following BLAST results are available for this feature:
BLAST of EY702496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
GDL67_ARATH1.411e-3557.55GDSL esterase/lipase At4g28780 OS=Arabidopsis thal... [more]
LTL1_ARATH2.252e-3357.55GDSL esterase/lipase LTL1 OS=Arabidopsis thaliana ... [more]
GDL77_ARATH3.841e-3355.17GDSL esterase/lipase At5g18430 OS=Arabidopsis thal... [more]
GDL79_ARATH1.157e-2951.80GDSL esterase/lipase At5g33370 OS=Arabidopsis thal... [more]
GDL81_ARATH2.588e-1334.27GDSL esterase/lipase At5g41890 OS=Arabidopsis thal... [more]
GDL64_ARATH4.415e-1338.24GDSL esterase/lipase At4g16230 OS=Arabidopsis thal... [more]
GDL37_ARATH2.423e-1159.32GDSL esterase/lipase At2g19060 OS=Arabidopsis thal... [more]
GDL75_ARATH4.133e-1157.63GDSL esterase/lipase At5g08460 OS=Arabidopsis thal... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-F07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702496 ID=EY702496; Name=EY702496; organism=Citrus sinensis; type=EST; length=870bp
ATTCCCTGCTCGACCACGCGTCCGGATTCGCGTTAAATATAATACAATGG
CAAGCTCATTTGTTTTTGGTGTACGGACAATTTTAGGTCTTGTGATGGCA
TTGGGAGCTTTGGCTCCTCAAGCTGCGGAGGCCGCTCGTGCTTTCTTTGG
GGTTGGTGATTCACTTGTTGACAATGGCAACAATAACTACTTGGCCACCA
CTGCTCGGGCTGATTCTCCACCGTACGGCATTGATTATCCGACTCGCCGA
CCCACAGGAAGATTCTCCAATGGCCTAAACATTCCTGATTTCATCAGTTG
GGTTCTTTTAATTGATCATATTCTTAATCTTTGTGTTGTTTGTTATATAT
ATATGTAATTGTTTTTTATTGTATAGTAACTTGACTAGCTATAACACATT
AATATGTGTGTCCGTATATGTGCAGGTCAGCACATTGGTTCGGAGCCCAC
ATTGCCGTATTTGAGTCCAGAGCTCACTGGGTCTAGACTACTTGTTGGAG
CCAATTTTGCTTCTGCTGGAATTGGAATACTCAATGACACAGGAATTCAA
TTTGTAAGTCCAGTACATACATATTTTTTTAAGCCACCATATGGCCCAGC
AAAATATTTTCACTTGCTTAAATACTTTTATTTTAGTTTTGCACGTGTAA
TTACTTTCAAATTTCTAGTCTGGTATCAAAGGGATCCTCAGACGCGGAGA
AATCGATTATACGATCTAAATGGACCCTATACCCATTACCAAAATATCAA
ATTCTATTTTACCACCGACCAATAACCCCATTGAAGAGAAAGACTCTTCC
CTTCTCTGGAAAAGAAATTTATTTTGGGAAAAAAAAAAAGAAGTTTCCAG
TAACCCAATAACCTAATTGT
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