EY702490
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY702490 vs. ExPASy Swiss-Prot
Match: U2A2A_NICPL (Splicing factor U2af large subunit A OS=Nicotiana plumbaginifolia GN=U2AF65A PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 9.955e-29 Identity = 55/67 (82.09%), Postives = 64/67 (95.52%), Query Frame = 3 Query: 78 GTLVNVIIPRPNPNGEPSPGVGKVFLEYADIDGATKARTGMNGRKFGGNQVVAVFYPENKFAQGDYE 278 G LVNV+IPRPNPNG P+PG+GKVFLEYAD+DG++KAR G+NGRKFGGNQVVAVFYPENKF++GDYE Sbjct: 488 GALVNVVIPRPNPNGVPTPGLGKVFLEYADVDGSSKARQGLNGRKFGGNQVVAVFYPENKFSEGDYE 554
BLAST of EY702490 vs. ExPASy Swiss-Prot
Match: U2A2B_NICPL (Splicing factor U2af large subunit B OS=Nicotiana plumbaginifolia GN=U2AF65B PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 4.941e-28 Identity = 54/68 (79.41%), Postives = 64/68 (94.12%), Query Frame = 3 Query: 78 GTLVNVIIPRPNPNGEPSPGVGKVFLEYADIDGATKARTGMNGRKFGGNQVVAVFYPENKFAQGDYEG 281 G+LVNV+IPRP+PNGEP+PGVGKVFLEYAD+D ++KAR +NGRKFGGNQVVAVFYPENKF +GDY+G Sbjct: 506 GSLVNVVIPRPSPNGEPTPGVGKVFLEYADVDSSSKARQSLNGRKFGGNQVVAVFYPENKFYEGDYDG 573
BLAST of EY702490 vs. ExPASy Swiss-Prot
Match: U2A2B_ARATH (Splicing factor U2af large subunit B OS=Arabidopsis thaliana GN=U2AF65B PE=2 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 4.941e-28 Identity = 54/67 (80.60%), Postives = 65/67 (97.01%), Query Frame = 3 Query: 78 GTLVNVIIPRPNPNGEPSPGVGKVFLEYADIDGATKARTGMNGRKFGGNQVVAVFYPENKFAQGDYE 278 G LVNV+IPRPNP+ +P+PGVGKVFLEYAD+DG++KAR+GMNGRKFGGNQVVAV+YPE+K+AQGDYE Sbjct: 522 GNLVNVVIPRPNPDHDPTPGVGKVFLEYADVDGSSKARSGMNGRKFGGNQVVAVYYPEDKYAQGDYE 588
BLAST of EY702490 vs. ExPASy Swiss-Prot
Match: U2A2A_ARATH (Splicing factor U2af large subunit A OS=Arabidopsis thaliana GN=U2AF65A PE=2 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 6.677e-25 Identity = 50/66 (75.76%), Postives = 59/66 (89.39%), Query Frame = 3 Query: 78 GTLVNVIIPRPNPNGEPSPGVGKVFLEYADIDGATKARTGMNGRKFGGNQVVAVFYPENKFAQGDY 275 G L NV+IPRP+PNGEP G+GKVFL+YAD DG+T+AR GMNGRKFGGN+VVAV+YPE+KF QGDY Sbjct: 506 GALTNVVIPRPSPNGEPVAGLGKVFLKYADTDGSTRARFGMNGRKFGGNEVVAVYYPEDKFEQGDY 571
BLAST of EY702490 vs. ExPASy Swiss-Prot
Match: U2A2B_WHEAT (Splicing factor U2af large subunit B OS=Triticum aestivum GN=U2AF65B PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 8.721e-25 Identity = 51/67 (76.12%), Postives = 59/67 (88.06%), Query Frame = 3 Query: 78 GTLVNVIIPRPNPNGEPSPGVGKVFLEYADIDGATKARTGMNGRKFGGNQVVAVFYPENKFAQGDYE 278 G LV V+IPRP+P+GEP GVGKVFLEYAD+DG+TKA+T M+GRKFGGN VVAVFYPENKFA DY+ Sbjct: 474 GNLVKVVIPRPHPSGEPVSGVGKVFLEYADVDGSTKAKTAMHGRKFGGNPVVAVFYPENKFADEDYD 540
BLAST of EY702490 vs. ExPASy Swiss-Prot
Match: U2A2B_ORYSJ (Splicing factor U2af large subunit B OS=Oryza sativa subsp. japonica GN=U2AF65B PE=2 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 1.645e-23 Identity = 48/67 (71.64%), Postives = 58/67 (86.57%), Query Frame = 3 Query: 78 GTLVNVIIPRPNPNGEPSPGVGKVFLEYADIDGATKARTGMNGRKFGGNQVVAVFYPENKFAQGDYE 278 G L+ V+IPRP+P+G P GVGKVFLEYAD+DGATKA+T M+GRKFGGN VVAVFYPENKF+ +Y+ Sbjct: 481 GNLIKVVIPRPDPSGLPVAGVGKVFLEYADVDGATKAKTAMHGRKFGGNPVVAVFYPENKFSSAEYD 547
BLAST of EY702490 vs. ExPASy Swiss-Prot
Match: U2A2A_ORYSJ (Splicing factor U2af large subunit A OS=Oryza sativa subsp. japonica GN=U2AF65A PE=2 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 4.051e-22 Identity = 45/68 (66.18%), Postives = 58/68 (85.29%), Query Frame = 3 Query: 78 GTLVNVIIPRPNPNGEPSPGVGKVFLEYADIDGATKARTGMNGRKFGGNQVVAVFYPENKFAQGDYEG 281 G LV V+IPRP+P+G P GVG+VFLE+AD++ +TKA+ GM+GRKF NQVVAVFYPE+KFA+G Y+G Sbjct: 507 GNLVKVVIPRPDPSGAPVAGVGRVFLEFADVESSTKAKNGMHGRKFANNQVVAVFYPEDKFAEGQYDG 574 The following BLAST results are available for this feature:
BLAST of EY702490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY702490 ID=EY702490; Name=EY702490; organism=Citrus sinensis; type=EST; length=563bpback to top |