EY702482

Overview
NameEY702482
Unique NameEY702482
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length792
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY702482_ssr437 microsatellite EY702482_ssr437:437..448. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig6928 contig Csv1_Contig6928:1258..2049. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702482 vs. ExPASy Swiss-Prot
Match: ASPR_CUCPE (Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.074e-47
Identity = 84/117 (71.79%), Postives = 102/117 (87.18%), Query Frame = 3
Query:   21 VRNKLSRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMANGSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 371
            ++N+L +N+T ++I+NY+N+LCDR+PSP G+SAVDC  LSSM   SFTIGGK+FDLAP EY+L+VGEG  AQCISGFTAFD+ PPRGPLWILGDVFMGRYHTVFD+G L +G AEAA
Sbjct:  397 MQNQLRQNQTKERIINYINELCDRMPSPMGQSAVDCGQLSSMPTVSFTIGGKIFDLAPEEYILKVGEGPVAQCISGFTAFDIPPPRGPLWILGDVFMGRYHTVFDFGKLRVGSAEAA 513          
BLAST of EY702482 vs. ExPASy Swiss-Prot
Match: CYPR1_CYNCA (Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO1 PE=1 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 6.849e-47
Identity = 84/117 (71.79%), Postives = 103/117 (88.03%), Query Frame = 3
Query:   21 VRNKLSRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMANGSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 371
            ++N++ +NET + I+NYV++LC+RLPSP GESAVDC +LSSM N +FT+GGK F+L+P +YVL+VGEG  AQCISGFTA DVAPP GPLWILGDVFMG+YHTVFDYGNL +GFAEAA
Sbjct:  357 MQNQIRQNETEENIINYVDKLCERLPSPMGESAVDCSSLSSMPNIAFTVGGKTFNLSPEQYVLKVGEGATAQCISGFTAMDVAPPHGPLWILGDVFMGQYHTVFDYGNLRVGFAEAA 473          
BLAST of EY702482 vs. ExPASy Swiss-Prot
Match: ASPR1_ORYSJ (Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica GN=Os05g0567100 PE=2 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 3.758e-45
Identity = 82/117 (70.09%), Postives = 100/117 (85.47%), Query Frame = 3
Query:   21 VRNKLSRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMANGSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 371
            ++N+L++N+T D ILNY+NQLCD+LPSP GES+VDC +L+SM   SFTIGGK F L P EY+L+VGEG AAQCISGFTA D+ PPRGPLWILGDVFMG YHTVFDYG + +GFA++A
Sbjct:  393 MQNQLAQNKTQDLILNYINQLCDKLPSPMGESSVDCGSLASMPEISFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGAYHTVFDYGKMRVGFAKSA 509          
BLAST of EY702482 vs. ExPASy Swiss-Prot
Match: ASPR_HORVU (Phytepsin OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 6.411e-45
Identity = 85/117 (72.65%), Postives = 99/117 (84.62%), Query Frame = 3
Query:   21 VRNKLSRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMANGSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 371
            ++N+L++N+T D IL+YVNQLC+RLPSP GESAVDC +L SM +  FTIGGK F L P EY+L+VGEG AAQCISGFTA D+ PPRGPLWILGDVFMG YHTVFDYG L IGFA+AA
Sbjct:  392 MQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSLGSMPDIEFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKAA 508          
BLAST of EY702482 vs. ExPASy Swiss-Prot
Match: ASPRX_ORYSJ (Aspartic proteinase OS=Oryza sativa subsp. japonica GN=RAP PE=2 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 2.884e-37
Identity = 70/117 (59.83%), Postives = 87/117 (74.36%), Query Frame = 3
Query:   21 VRNKLSRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMANGSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 371
            + N+L  N+T + ILNY NQLC+RLPSPNGES V C  +S M N +FTI  K F L P +Y++++ +G    CISGF AFD+ PPRGPLWILGDVFMG YHTVFD+G   IGFA++A
Sbjct:  380 IENQLRENKTKELILNYANQLCERLPSPNGESTVSCHQISKMPNLAFTIANKTFILTPEQYIVKLEQGGQTVCISGFMAFDIPPPRGPLWILGDVFMGAYHTVFDFGKDRIGFAKSA 496          
BLAST of EY702482 vs. ExPASy Swiss-Prot
Match: ASPP_AEDAE (Lysosomal aspartic protease OS=Aedes aegypti GN=AAEL006169 PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.784e-21
Identity = 48/99 (48.48%), Postives = 61/99 (61.62%), Query Frame = 3
Query:   72 VNQLCDRLPSPNGESAVDCDNLSSMANGSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEA 368
            +N+     P  NGE  VDC  +  +   SF +GGK FDL   +YVL V +     C+SGF   D+ PP GPLWILGDVF+G+Y+T FD GN  +GFA A
Sbjct:  288 INKAIGGTPIMNGEYMVDCSLIPKLPKISFVLGGKSFDLEGADYVLRVAQMGKTICLSGFMGIDIPPPNGPLWILGDVFIGKYYTEFDMGNDRVGFATA 386          
BLAST of EY702482 vs. ExPASy Swiss-Prot
Match: CATE_RANCA (Cathepsin E OS=Rana catesbeiana GN=CTSE PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.878e-20
Identity = 49/103 (47.57%), Postives = 66/103 (64.08%), Query Frame = 3
Query:   54 DQILNYVNQLCDRLPSPNGESAVDCDNLSSMANGSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFA 362
            +Q+ NY+      + + NGE  V C  LS M + +FTI G  + L P +Y+LE G G    C SGF   D++PP GPLWILGDVF+G+Y++VFD GN  +GFA
Sbjct:  291 EQLQNYIG-----VTNTNGEYGVSCSTLSLMPSVTFTINGLDYSLTPEQYMLEDGGGY---CSSGFQGLDISPPSGPLWILGDVFIGQYYSVFDRGNNRVGFA 385          
BLAST of EY702482 vs. ExPASy Swiss-Prot
Match: CATD_HUMAN (Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.878e-20
Identity = 44/93 (47.31%), Postives = 62/93 (66.67%), Query Frame = 3
Query:   93 LPSPNGESAVDCDNLSSMANGSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 371
            +P   GE  + C+ +S++   +  +GGK + L+P +Y L+V +     C+SGF   D+ PP GPLWILGDVF+GRY+TVFD  N  +GFAEAA
Sbjct:  318 VPLIQGEYMIPCEKVSTLPAITLKLGGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILGDVFIGRYYTVFDRDNNRVGFAEAA 410          
BLAST of EY702482 vs. ExPASy Swiss-Prot
Match: CATD_MOUSE (Cathepsin D OS=Mus musculus GN=Ctsd PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.465e-20
Identity = 43/92 (46.74%), Postives = 61/92 (66.30%), Query Frame = 3
Query:   93 LPSPNGESAVDCDNLSSMANGSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEA 368
            +P   GE  + C+ +SS+      +GGK ++L P++Y+L+V +G    C+SGF   D+ PP GPLWILGDVF+G Y+TVFD  N  +GFA A
Sbjct:  316 VPLIQGEYMIPCEKVSSLPTVYLKLGGKNYELHPDKYILKVSQGGKTICLSGFMGMDIPPPSGPLWILGDVFIGSYYTVFDRDNNRVGFANA 407          
BLAST of EY702482 vs. ExPASy Swiss-Prot
Match: ASP3_CAEEL (Aspartic protease 3 OS=Caenorhabditis elegans GN=asp-3 PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 5.465e-20
Identity = 43/91 (47.25%), Postives = 62/91 (68.13%), Query Frame = 3
Query:   93 LPSPNGESAVDCDNLSSMANGSFTIGGKVFDLAPNEYVLEVGEGVAAQ-CISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFA 362
            +P  NGE  V+C  + S+ N +F +GG+ FDL   +Y+L++  G     C+SGF   D+  P GPLWILGDVF+GR+++VFD+GN  +GFA
Sbjct:  302 IPLFNGEYEVECSKIPSLPNITFNLGGQNFDLQGKDYILQMSNGNGGSTCLSGFMGMDIPAPAGPLWILGDVFIGRFYSVFDHGNKRVGFA 392          
The following BLAST results are available for this feature:
BLAST of EY702482 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
ASPR_CUCPE3.074e-4771.79Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1[more]
CYPR1_CYNCA6.849e-4771.79Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO... [more]
ASPR1_ORYSJ3.758e-4570.09Aspartic proteinase oryzasin-1 OS=Oryza sativa sub... [more]
ASPR_HORVU6.411e-4572.65Phytepsin OS=Hordeum vulgare PE=1 SV=1[more]
ASPRX_ORYSJ2.884e-3759.83Aspartic proteinase OS=Oryza sativa subsp. japonic... [more]
ASPP_AEDAE3.784e-2148.48Lysosomal aspartic protease OS=Aedes aegypti GN=AA... [more]
CATE_RANCA1.878e-2047.57Cathepsin E OS=Rana catesbeiana GN=CTSE PE=1 SV=1[more]
CATD_HUMAN1.878e-2047.31Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1[more]
CATD_MOUSE5.465e-2046.74Cathepsin D OS=Mus musculus GN=Ctsd PE=1 SV=1[more]
ASP3_CAEEL5.465e-2047.25Aspartic protease 3 OS=Caenorhabditis elegans GN=a... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-E04-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702482 ID=EY702482; Name=EY702482; organism=Citrus sinensis; type=EST; length=792bp
ATTCCCTGCACAACCCACGCGTCCGGAACAAGCTGTCGCGAAATGAGACA
GCAGATCAAATCTTGAATTATGTGAATCAGCTTTGTGACCGTCTGCCCAG
TCCAAATGGAGAATCAGCTGTTGATTGTGACAATTTATCTTCCATGGCCA
ATGGTTCATTTACAATTGGTGGCAAAGTATTTGACCTTGCACCAAATGAG
TATGTTCTTGAAGTGGGAGAGGGAGTTGCAGCCCAATGCATCAGTGGATT
TACTGCTTTCGATGTGGCCCCTCCGCGTGGTCCTCTGTGGATTCTGGGAG
ATGTTTTCATGGGTCGCTATCACACTGTGTTCGACTACGGCAACTTGTCT
ATTGGATTCGCCGAAGCAGCTTGAACAAAATCCACTGGCTTCGTCCATTT
CCATAACTAGCTTGTTGTAATAATTATATACACATGCATACATACATATA
TATGTGTATATATGTGTGTGTTTGTGTCTCTGTGTGTGTATTATAATCCA
GTCCAGGATCGGACTTTATTAGAATCCGGAAAGGTTATTAAACCGTGCGG
TTTAGGTTTAATAGCATAATGCCATTCTACTATTAAACCATGTAGTTTGA
TCATTTTCATGGTCATTATACTATTAAACCAAACGGGTTAATAACTTTCC
CAAGCATTAACAAATGCAGGATCCAAAACTAAAACATTTATCTATATATG
CACCATGGTGATANGATATAGACTTATACTAAAACTCATTTGTAAAATAT
TTGCAGGTAATAATGTGTATTTGCCATAAAAAAAAAAAAAAA
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