EY702480

Overview
NameEY702480
Unique NameEY702480
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length938
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702480 vs. ExPASy Swiss-Prot
Match: CO058_MOUSE (UPF0580 protein C15orf58 homolog OS=Mus musculus PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 9.985e-14
Identity = 41/101 (40.59%), Postives = 58/101 (57.43%), Query Frame = 1
Query:   13 SPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLHFQAYYMALPFPIEKAPTKKIISTGSGVKISELLNYPVRGLVF 315
            SP+E+GHVLL+P   + LPQR+      + L     + +P FR+G+NSLG  A++NHLH   YY+A P P+E AP+  +   G    I  L   P  G +F
Sbjct:  161 SPLEWGHVLLVPAPAQGLPQRLLPGVLRVGLEAVLLSLHPGFRVGFNSLGGLASVNHLHLHCYYLAHPLPVEGAPSTPLDPKGC---IHLLQALPAPGFLF 258          
BLAST of EY702480 vs. ExPASy Swiss-Prot
Match: CO058_BOVIN (UPF0580 protein C15orf58 homolog OS=Bos taurus PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.905e-13
Identity = 38/101 (37.62%), Postives = 58/101 (57.43%), Query Frame = 1
Query:   13 SPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLHFQAYYMALPFPIEKAPTKKIISTGSGVKISELLNYPVRGLVF 315
            SP+E+GHVLL+P     LPQR+   +    +     + +P FR+G+NSLG  A++NHLH   YY+A   P+E AP++ +   G   ++  L   P  G +F
Sbjct:  160 SPLEWGHVLLVPEPARGLPQRLLPGALRAGVEAVLLSSHPGFRVGFNSLGGLASVNHLHLHGYYLAHRLPVEGAPSEPLDPRG---RLHVLQALPAPGFLF 257          
BLAST of EY702480 vs. ExPASy Swiss-Prot
Match: CO058_HUMAN (UPF0580 protein C15orf58 OS=Homo sapiens GN=C15orf58 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.794e-13
Identity = 38/101 (37.62%), Postives = 59/101 (58.42%), Query Frame = 1
Query:   13 SPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLHFQAYYMALPFPIEKAPTKKIISTGSGVKISELLNYPVRGLVF 315
            SP+E+GHVLL+P     LPQR+   +    +     + +P FR+G+NSLG  A++NHLH   YY+A   P+E+AP++ +     G  +  L + P  G +F
Sbjct:  160 SPLEWGHVLLVPEPARQLPQRLLPGALRAGIEAVLLSLHPGFRVGFNSLGGLASVNHLHLHGYYLAHRLPVEQAPSEPL---DPGGHLHLLQDLPAPGFLF 257          
BLAST of EY702480 vs. ExPASy Swiss-Prot
Match: CO058_MACFA (UPF0580 protein C15orf58 homolog OS=Macaca fascicularis GN=QflA-20034 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.956e-13
Identity = 38/101 (37.62%), Postives = 58/101 (57.43%), Query Frame = 1
Query:   13 SPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLHFQAYYMALPFPIEKAPTKKIISTGSGVKISELLNYPVRGLVF 315
            SP+E+GHVLL+P     LPQR+   +    +     + +P FR+G+NSLG  A++NHLH   YY+A   P+E+AP++ +     G  +  L   P  G +F
Sbjct:  160 SPLEWGHVLLVPEPARGLPQRLLPGALRAGIEAVLLSLHPGFRVGFNSLGGLASVNHLHLHGYYLAHRLPVEQAPSEPL---DPGGHLHLLQGLPAPGFLF 257          
BLAST of EY702480 vs. ExPASy Swiss-Prot
Match: CO058_DANRE (UPF0580 protein C15orf58 homolog OS=Danio rerio GN=zgc:153343 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.956e-13
Identity = 36/104 (34.62%), Postives = 59/104 (56.73%), Query Frame = 1
Query:   13 SPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLHFQAYYMALPFPIEKAPTKKIISTGSGVKISELLNYPVRGLVFEGG 324
            SP+E+GH LL+P   +C PQ +   +    +     + +P FR+G+NSLG FA++NHLH   YY+     IE +P K ++     + + EL+++P   L +  G
Sbjct:  125 SPLEFGHCLLVPEPEKCFPQVLTHLAVQTGIETVLLSADPGFRVGFNSLGGFASVNHLHLHGYYLNHRLKIESSPAKLVL---PNLNLYELVDFPSGFLFYTQG 225          
BLAST of EY702480 vs. ExPASy Swiss-Prot
Match: CO058_XENLA (UPF0580 protein C15orf58 homolog OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.479e-12
Identity = 33/79 (41.77%), Postives = 48/79 (60.76%), Query Frame = 1
Query:   13 SPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLHFQAYYMALPFPIEKAPTKKI 249
            SP+E+GHVL +P    CLPQ +  D  L  L     + +P FR+G+NSLG FA++NHLH   +Y+     IE + +K +
Sbjct:  179 SPLEFGHVLFMPDPSLCLPQILTEDLMLFGLESVLLSAHPGFRVGFNSLGGFASVNHLHLHGFYLDHDLFIESSSSKPL 257          
BLAST of EY702480 vs. ExPASy Swiss-Prot
Match: CO058_XENTR (UPF0580 protein C15orf58 homolog OS=Xenopus tropicalis PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.082e-11
Identity = 34/101 (33.66%), Postives = 56/101 (55.45%), Query Frame = 1
Query:   13 SPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLHFQAYYMALPFPIEKAPTKKIISTGSGVKISELLNYPVRGLVF 315
            SP+E+GHVL +P    CLPQ +  +  L  +     + +P FR+G+NSLG FA++NHLH   +Y+     IE + +K +      +    + ++P  G +F
Sbjct:  178 SPLEFGHVLFMPDPSLCLPQILTENLMLFGMESVFLSSHPGFRVGFNSLGGFASVNHLHLHGFYLDHELLIESSCSKPLCPE---INFHLVTHFPAPGFLF 275          
The following BLAST results are available for this feature:
BLAST of EY702480 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
CO058_MOUSE9.985e-1440.59UPF0580 protein C15orf58 homolog OS=Mus musculus P... [more]
CO058_BOVIN2.905e-1337.62UPF0580 protein C15orf58 homolog OS=Bos taurus PE=... [more]
CO058_HUMAN3.794e-1337.62UPF0580 protein C15orf58 OS=Homo sapiens GN=C15orf... [more]
CO058_MACFA4.956e-1337.62UPF0580 protein C15orf58 homolog OS=Macaca fascicu... [more]
CO058_DANRE4.956e-1334.62UPF0580 protein C15orf58 homolog OS=Danio rerio GN... [more]
CO058_XENLA5.479e-1241.77UPF0580 protein C15orf58 homolog OS=Xenopus laevis... [more]
CO058_XENTR2.082e-1133.66UPF0580 protein C15orf58 homolog OS=Xenopus tropic... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-E02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702480 ID=EY702480; Name=EY702480; organism=Citrus sinensis; type=EST; length=938bp
CCACGCGTCCGGAGTCCTATTGAGTACGGGCATGTGCTGTTGATCCCACG
AGTTCTTGAGTGCTTGCCACAGAGGATTGACCGTGATAGCTTCTTGCTCG
CACTTTACATGGCTGCAGAAGCTGGGAATCCATACTTCAGGTTGGGTTAC
AACAGCTTGGGTGCATTTGCTACCATCAACCACCTTCACTTCCAGGCTTA
CTACATGGCCTTGCCTTTTCCAATTGAGAAGGCTCCTACCAAGAAGATAA
TCTCTACTGGCAGTGGTGTGAAGATCTCTGAGCTTTTAAACTATCCAGTC
AGAGGCCTCGTCTTTGAAGGTGGGAAACTCTCTGGAAGACTTATCCAACA
CCAGGCTCGGATGCGTGCATTTGCCTTCAAGAGAACAACCTTCCTTACAA
TGGTCTCATTGCTGATTGGCGAAAGCGGATATTTCTCTTTACCACAGTGC
TATGCTGAGAAACAAGCTCTTTGGGGGAATTGAGTTCCGAGCTTCTGGAC
CCCCAATTGAACCCTGCTCTGTGGGACATTACCGGGCATATGGTGGCTAA
AGAGGAAAACGGCCTAGAACAGGGCTCCCCAGGAAAAAGGCCTGGGGGGC
TGCTGCCACAAGCCTCCCTCCCCGGCGGGAGGGACCCGGAAGCAAAAGCT
CCCCACCCTCTGAACCCTTGCGCGTGGGGGTTATCCCCCAAGCAGCGCTT
CCCACAAACCACATCCGGGAAGGGCAAACCTACACCAGCCGCTGGGGGGA
AAGAGGCGCCGAATTTATCAAACCCTTTTCCTCCCCCGGCGCGCGGCGGA
CCCCCCAAAGGCCGGGTTTTCTTGAGCAACCTTGCCTGTGGCGCCACCCA
GCGGCGAGTGTGCTGTGCATTCGTGCTTCCCGAAGACAAGGAGGGGCCGG
GCGGCGGGGTGCCCGCCCCCACCCGCCGCCCCCCTTGG
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