EY702473

Overview
NameEY702473
Unique NameEY702473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length935
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2150 contig Csv1_Contig2150:510..1445. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702473 vs. ExPASy Swiss-Prot
Match: CC032_HUMAN (Uncharacterized protein C3orf32 OS=Homo sapiens GN=C3orf32 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.825e-16
Identity = 54/186 (29.03%), Postives = 79/186 (42.47%), Query Frame = 1
Query:   43 ETISET-------EPYLGGNIDGKDNGPALGTWELDLRAQFPVLFGPRQETR-VKVPRSETIKKCPDCVGRGNAVCPSCNANQEPEYYKEKQMSQCFNCYGRGLIAHKDGSDTICTKCSGKGTIPCATCGSRGLIKCRKCGGSGSLLTRSFAIVRWKTLSTRKVSATSGSGSVPDEVFHRAKGVQL 576
            ET SE+       +P+   ++DG   G +   W  D++ Q P +F  +++TR  +VP S  +K+C  C GRG   C  C+              +C +C G      K      C  C+G G   C+TC  RG   C  C G   LL     ++ WK      VS      + P E+  +AKG  L
Sbjct:   95 ETFSESRISEWTFQPFTNHSVDGPQRGASPRLW--DIKVQGPPMF--QEDTRKFQVPHSSLVKECHKCHGRGRYKCSGCHG---------AGTVRCPSCCGA---KRKAKQSRRCQLCAGSGRRRCSTCSGRGNKTCATCKGEKKLLHFIQLVIMWKNSLFEFVS--EHRLNCPRELLAKAKGENL 262          

HSP 2 Score: 33.8834 bits (76), Expect = 7.825e-16
Identity = 21/61 (34.43%), Postives = 31/61 (50.82%), Query Frame = 2
Query:  653 IAER-AHVPPTARIICERHTISGGPVTPGPMTQGGQSFNFYINGNSREGTLRDYPARVCWG 832
            IAE  A +   AR++ +R TI   P+T       G+++ +YI G   +    DYP R C G
Sbjct:  289 IAEHSAALASRARVLQQRQTIELIPLTEVHYWYQGKTYVYYIYGTDHQVYAVDYPERYCCG 349          
BLAST of EY702473 vs. ExPASy Swiss-Prot
Match: CC032_MOUSE (Uncharacterized protein C3orf32 homolog OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.533e-11
Identity = 47/157 (29.94%), Postives = 68/157 (43.31%), Query Frame = 1
Query:   43 ETISET-------EPYLGGNIDGKDNGPALGTWELDLRAQFPVLFGPRQETR-VKVPRSETIKKCPDCVGRGNAVCPSCNANQEPEYYKEKQMSQCFNCYGRGLIAHKDGSDTICTKCSGKGTIPCATCGSRGLIKCRKCGGSGSLLTRSFAIVRWK 489
            ET SE+       +P    ++DG   G +   W  D++ Q P +F  +++TR ++VP S  +K+C  C GRG   C  C+            M +C +C G      K      C  CSG G   C+TC  RG   C  C G   L      ++ WK
Sbjct:  118 ETFSESRVSEWTFQPVTNHSVDGPQRGTSPRLW--DMKVQVPPMF--QEDTRKLQVPHSSLVKECHKCHGRGRYKCSGCHG---------AGMVRCSSCSGT---KRKAKQPRRCHLCSGSGRRRCSTCSGRGNKTCATCKGERKLEHFVQLVIMWK 258          
The following BLAST results are available for this feature:
BLAST of EY702473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
CC032_HUMAN7.825e-1629.03Uncharacterized protein C3orf32 OS=Homo sapiens GN... [more]
CC032_MOUSE3.533e-1129.94Uncharacterized protein C3orf32 homolog OS=Mus mus... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-D04-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702473 ID=EY702473; Name=EY702473; organism=Citrus sinensis; type=EST; length=935bp
GCAGGACCGGTCCGGAATCCCTTCCCCACCACGCGTCCGAGGGAAACCAT
TAGCGAAACAGAACCTTACCTTGGTGGAAACATTGATGGGAAAGATAATG
GGCCTGCACTAGGGACTTGGGAATTGGATCTAAGGGCACAATTCCCTGTT
CTATTTGGACCTCGTCAAGAAACACGAGTAAAAGTTCCTCGTTCTGAAAC
AATCAAGAAATGCCCTGATTGTGTAGGACGAGGAAATGCTGTCTGTCCTA
GTTGCAATGCAAATCAAGAGCCTGAATATTATAAGGAAAAGCAGATGAGT
CAGTGCTTCAATTGTTATGGAAGGGGTTTGATTGCTCATAAAGATGGGTC
TGACACAATCTGTACGAAATGCAGTGGAAAGGGAACAATTCCTTGTGCAA
CTTGTGGATCTCGTGGGTTAATAAAATGCAGGAAATGTGGTGGAAGTGGT
TCTCTTTTGACACGCAGTTTTGCCATTGTTAGATGGAAGACTCTGTCAAC
CCGAAAAGTAAGTGCAACCAGCGGATCAGGTTCTGTCCCAGATGAGGTTT
TCCACAGAGCCAAAGGGGTTCAGTTGTGTAACACTCAAGCATACCAATGC
TCTCCTGCATTTTTTGCTGACTCTTTCTTTCTCACAAGTTCTCTTCTGAA
GTATTGCAGAACGGGCTCATGTGCCTCCTACTGCCAGGATTATATGTGAG
AGGCATACTATTTCTGGTGGTCCAGTAACTCCGGGTCCCATGACTCAGGG
GGGCCAATCCTTCAATTTCTATATAAATGGGAATAGCAGAGAGGGGACCT
TAAGAGACTATCCCGCTAGGGTTTGCTGGGGCCTCTGGCCTTGCTGGAGG
GGTAAAAATGGAATTTGCTCAAATCCCATCCTCCCAAGATGGAAGCTTGC
CTTTATGGGACTGGAATTTGGGAGTCCTTGGATGA
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