CX078582
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX078582 vs. ExPASy Swiss-Prot
Match: SCL6_ARATH (Scarecrow-like protein 6 OS=Arabidopsis thaliana GN=SLC6 PE=2 SV=1) HSP 1 Score: 343.969 bits (881), Expect = 6.810e-94 Identity = 177/291 (60.82%), Postives = 213/291 (73.20%), Query Frame = 1 Query: 4 KISAYKSFSEISPILQFANFTCNQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVLRSEGPP-SLKITAFASPSTHDELELSFTRENLKHFASEINMPFXXXXXXXXXXXXXXXXXXXRGLESEATAVNLPIGTFCNYPATFPSVLCFVKQLKPKIVVSLDRGCDRTDVPFPHHMIHALQSYSCLLESLDAVNVNLDALQKIERFLVYPCIEKIVLGRHHSPER-LPPWKSLFMQSGFAPLTFSNFTESQADCLVQRTPVKGFHVEKRQSSLALCWQRKELILATAWRC 870 KI+AYKSFSEISP+LQFANFT NQALLE+F G +R+HIIDFDIGYGGQWASLMQELVLR P SLKIT FASP+ HD+LEL FT++NLKHFASEIN+ E EA AVN+ +F + P VL FVK L P I+V DRGC+RTD+PF + H+L S++ L ESLDAVN NLDA+QKIERFL+ P IEK+VL R ER + W+++F+Q GF+P+T SNFTESQA+CLVQRTPV+GFHVEK+ +SL LCWQR EL+ +AWRC Sbjct: 272 KIAAYKSFSEISPVLQFANFTSNQALLESFHGFHRLHIIDFDIGYGGQWASLMQELVLRDNAAPLSLKITVFASPANHDQLELGFTQDNLKHFASEINISL---DIQVLSLDLLGSISWPNSSEKEAVAVNISAASFSH----LPLVLRFVKHLSPTIIVCSDRGCERTDLPFSQQLAHSLHSHTALFESLDAVNANLDAMQKIERFLIQPEIEKLVLDRSRPIERPMMTWQAMFLQMGFSPVTHSNFTESQAECLVQRTPVRGFHVEKKHNSLLLCWQRTELVGVSAWRC 555
BLAST of CX078582 vs. ExPASy Swiss-Prot
Match: SCL27_ARATH (Scarecrow-like protein 27 OS=Arabidopsis thaliana GN=SCL27 PE=2 SV=1) HSP 1 Score: 295.049 bits (754), Expect = 3.628e-79 Identity = 160/300 (53.33%), Postives = 197/300 (65.67%), Query Frame = 1 Query: 1 LKISAYKSFSEISPILQFANFTCNQALLEAFE--GCNRIHIIDFDIGYGGQWASLMQELVL-----RSEGPPSLKITAFASP--STHDELELSFTRENLKHFASEINMPFXXXXXXXXXXXXXXXXXXX-RGLESEATAVNLPIGTFCNYPATFPSVLCFVKQLKPKIVVSLDRGCDRTDVPFPHHMIHALQSYSCLLESLDAVNVNLDALQKIERFLVYPCIEKIVLGRHHSPERLPPWKSLFMQSGFAPLTFSNFTESQADCLVQRTPVKGFHVEKRQSSLALCWQRKELILATAWRC 870 L+I+AY+SFSE SP LQF NFT NQ++LE+ G +RIHIIDFD+GYGGQW+SLMQEL R SLK+T FA P + DE EL FT ENLK FA E+ +PF R E EA AVNLP+ + + P +L F+KQL P IVV DRGCDR D PFP+ +IH+LQ ++ LLESLDA N N D IERF V P IEK+++ RH ER PPW+ LF Q GF+P + S E+QA+CL+QR PV+GFHVEKRQSSL +CWQRKEL+ +AW+C Sbjct: 345 LRIAAYRSFSETSPFLQFVNFTANQSILESCNESGFDRIHIIDFDVGYGGQWSSLMQELASGVGGRRRNRASSLKLTVFAPPPSTVSDEFELRFTEENLKTFAGEVKIPFEIELLSVELLLNPAYWPLSLRSSEKEAIAVNLPVNSVAS--GYLPLILRFLKQLSPNIVVCSDRGCDRNDAPFPNAVIHSLQYHTSLLESLDA-NQNQDD-SSIERFWVQPSIEKLLMKRHRWIERSPPWRILFTQCGFSPASLSQMAEAQAECLLQRNPVRGFHVEKRQSSLVMCWQRKELVTVSAWKC 640
BLAST of CX078582 vs. ExPASy Swiss-Prot
Match: SCL22_ARATH (Scarecrow-like protein 22 OS=Arabidopsis thaliana GN=SCL22 PE=2 SV=1) HSP 1 Score: 294.664 bits (753), Expect = 4.738e-79 Identity = 161/300 (53.67%), Postives = 200/300 (66.67%), Query Frame = 1 Query: 4 KISAYKSFSEISPILQFANFTCNQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELV---LRSEGPPSLKITAFASPST-HDELELSFTRENLKHFASEINMPF--XXXXXXXXXXXXXXXXXXXRGLESEATAVNLPIGTFCNYPATFPSVLCFVKQLKPKIVVSLDRGCDR-TDVPFPHHMIHALQSYSCLLESLDAVNV-NLDALQKIERFLVYPCIEKIVLGRHHSPERLPPWKSLFMQSGFAPLTFSNFTESQADCLVQRTPVKGFHVEKRQS---SLALCWQRKELILATAWRC 870 +I+AY++FSE SP LQF NFT NQ +LE+FEG +RIHI+DFDIGYGGQWASL+QEL RS PSLKITAFASPST DE EL FT ENL+ FA E + F R E EA AVNLPI + + P +L F+KQ+ P +VV DR CDR D PFP+ +I+ALQ Y+ LLESLD+ N+ N +A IERF V P I+K++ R+ ER PPW+SLF Q GF P+T S E+QA+ L+QR P++GFH+EKRQS SL LCWQRKEL+ +AW+C Sbjct: 326 RIAAYRAFSETSPFLQFVNFTANQTILESFEGFDRIHIVDFDIGYGGQWASLIQELAGKRNRSSSAPSLKITAFASPSTVSDEFELRFTEENLRSFAGETGVSFEIELLNMEILLNPTYWPLSLFRSSEKEAIAVNLPISSMVS--GYLPLILRFLKQISPNVVVCSDRSCDRNNDAPFPNGVINALQYYTSLLESLDSGNLNNAEAATSIERFCVQPSIQKLLTNRYRWMERSPPWRSLFGQCGFTPVTLSQTAETQAEYLLQRNPMRGFHLEKRQSSSPSLVLCWQRKELVTVSAWKC 623
BLAST of CX078582 vs. ExPASy Swiss-Prot
Match: SCL15_ARATH (Scarecrow-like protein 15 OS=Arabidopsis thaliana GN=SCL15 PE=2 SV=2) HSP 1 Score: 148.673 bits (374), Expect = 4.199e-35 Identity = 103/302 (34.11%), Postives = 156/302 (51.66%), Query Frame = 1 Query: 4 KISAYKSFSEISPILQFANFTCNQALLEAFEGCNR---IHIIDFDIGYGGQWASLMQELVLRSEGPPSLKITAFASPSTHDELELSFTRENLKHFASEINMPFXXXXXXXXXXXXXXXXXXXRGLESEATAVNLPIGTFCNYPATFPSVLCFVKQLK---PKIVVSLDRGCDRTDVP----FPHHMIHALQSYSCLLESLDAVNVNLDALQKI-ERFLVYPCIEKIV---LGRHHSPERLPPWKSLFMQSGFAPLTFSNFTESQADCLVQRTPVKGFHVEKRQSSLALCWQRKELILATAWR 867 +I A K +S ISPI F++FT NQA+L++ + +H++DF+IG+GGQ+ASLM+E+ +S L++TA + E L +ENL FA+E+ + F R +E E T V + F + FV L+ PK+VV +D T++ F + AL+ Y+ +LESLDA D ++KI E F++ P I V R H+ E W+ F +G P+ S F + QA+CL+++ V+GFHV KRQ L LCW + L+ +AWR Sbjct: 194 RIRAIKEYSGISPIPLFSHFTANQAILDSLSSQSSSPFVHVVDFEIGFGGQYASLMREITEKSVSGGFLRVTAVVAEECAVETRL--VKENLTQFAAEMKIRFQIEFVLMKTFEMLSFKAI-RFVEGERTVVLISPAIF----RRLSGITDFVNNLRRVSPKVVVFVDSE-GWTEIAGSGSFRREFVSALEFYTMVLESLDAAAPPGDLVKKIVEAFVLRPKISAAVETAADRRHTGEMT--WREAFCAAGMRPIQQSQFADFQAECLLEKAQVRGFHVAKRQGELVLCWHGRALVATSAWR 485
BLAST of CX078582 vs. ExPASy Swiss-Prot
Match: GAIPB_CUCMA (DELLA protein GAIP-B OS=Cucurbita maxima GN=GAIPB PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.308e-28 Identity = 87/288 (30.21%), Postives = 130/288 (45.14%), Query Frame = 1 Query: 25 FSEISPILQFANFTCNQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVLRSEGPPSLKITAFASPSTHDELELSFTRENLKHFASEINMPF-XXXXXXXXXXXXXXXXXXXRGLESEATAVN--LPIGTFCNYPATFPSVLCFVKQLKPKIVVSLDRGCDRTDVPFPHHMIHALQSYSCLLESLDAVNVNLDALQKIERFLVYPCIEKIVL---GRHHSPERLPPWKSLFMQSGFAPLTFSNFTESQADCLVQR-TPVKGFHVEKRQSSLALCWQRKELILATAWR 867 F E SP L+FA+FT NQA+LEAFEG R+H+IDF + G QW +L+Q L LR GPP+ ++T P+ + L L IN+ F R E E+ VN + P V+ VKQ+KP+I+ +++ + F +L YS L +SL++ N D + E +L + R E L W++ SGF P+ + QA L+ +G+ VE+ SL L W + LI+ +AW+ Sbjct: 291 FYESSPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGMQWPALLQALALRPSGPPAFRLTGIGPPAPDNSDYLQDVGWKLAKLVETINVEFEYRGFVANSLADLDASMLELRPSEVESVVVNSVFELHKLLARPGAIEKVMSVVKQMKPEIMTVVEQEANHNGPVFMDRFTESLHYYSTLFDSLESSPNNQDKMMS-EMYLGKQICNVVACEGSDRVEWHETLTQWRTRLCSSGFEPIHLGSNAFKQASMLLALFGSGEGYRVEENNGSLTLGWHTRPLIVTSAWK 577
BLAST of CX078582 vs. ExPASy Swiss-Prot
Match: GAIP_CUCMA (DELLA protein GAIP OS=Cucurbita maxima GN=GAIP PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.806e-28 Identity = 89/291 (30.58%), Postives = 133/291 (45.70%), Query Frame = 1 Query: 25 FSEISPILQFANFTCNQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVLRSEGPPSLKITAFASPSTHDELELSFTRENLKHFASEINMPF-XXXXXXXXXXXXXXXXXXXRGLESEATAVN--LPIGTFCNYPATFPSVLCFVKQLKPKIVVSLDRGCDRTDVPFPHHMIHALQSYSCLLESLDAVNVNLDALQKIERFL------VYPCIEKIVLGRHHSPERLPPWKSLFMQSGFAPLTFSNFTESQADCLVQR-TPVKGFHVEKRQSSLALCWQRKELILATAWR 867 F E P L+FA+FT NQA+LEAFEG R+H+IDF + G QW +L+Q L LR GPP+ ++T P+ + L L FA +++ F R E E+ VN + P VL VKQ+KP+IV +++ + F +L YS L +SL+ + D + E +L V C + RH E L W++ +GF P+ + QA L+ +G+ VE+ + SL L W + LI +AW+ Sbjct: 284 FYESCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGIQWPALIQALALRPSGPPTFRLTGIGPPAPDNSDYLQDVGWKLVKFAETLHVEFEYRGFVANSLADLDASMLELRPSEVESVVVNSVFELHQLLARPGAIEKVLSVVKQMKPEIVTVVEQEANHNGPVFVERFTESLHYYSTLFDSLECSPNSQDKMMS-EMYLGKQICNVVACEGADRVERH---ETLTQWRTRLSSAGFDPIHLGSNAFKQASILLALFGSGEGYRVEENEGSLMLGWHTRPLIATSAWK 570
BLAST of CX078582 vs. ExPASy Swiss-Prot
Match: RGA1_BRACM (DELLA protein RGA1 OS=Brassica campestris GN=RGA1 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 3.222e-27 Identity = 91/291 (31.27%), Postives = 128/291 (43.99%), Query Frame = 1 Query: 25 FSEISPILQFANFTCNQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVLRSEGPPSLKITAFASPSTHDELELSFTRENLKHFASEINMPF-XXXXXXXXXXXXXXXXXXXRGLESEATAVN--LPIGTFCNYPATFPSVLCFVKQLKPKIVVSLDRGCDRTDVPFPHHMIHALQSYSCLLESLDAVNVNLDALQKIERFL------VYPCIEKIVLGRHHSPERLPPWKSLFMQSGFAPLTFSNFTESQADCLVQR-TPVKGFHVEKRQSSLALCWQRKELILATAWR 867 F E P L+FA+FT NQA+LEAFEG R+H+IDF + G QW +LMQ L LR GPPS ++T P+ + L L A I++ F R E+EA AVN + V VKQ+KP I +++ + F +L YS L +SL+ + D + E +L + C + RH E L W + F SGFAP + QA L+ +G+ VE+ L L W + LI +AW+ Sbjct: 282 FYETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGLQWPALMQALALREGGPPSFRLTGIGPPAADNSDHLHEVGCKLAQLAEAIHVEFEYRGFVANSLADLDASMLELRPSETEAVAVNSVFELHKLLGRTGGIEKVFGVVKQIKPVIFTVVEQESNHNGPVFLDRFTESLHYYSTLFDSLEGAPSSQDKVMS-EVYLGKQICNLVACEGPDRVERH---ETLSQWSNRFGSSGFAPAHLGSNAFKQASTLLALFNGGEGYRVEENNGCLMLSWHTRPLITTSAWK 568
BLAST of CX078582 vs. ExPASy Swiss-Prot
Match: RGA_ARATH (DELLA protein RGA OS=Arabidopsis thaliana GN=RGA PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 5.497e-27 Identity = 91/291 (31.27%), Postives = 130/291 (44.67%), Query Frame = 1 Query: 25 FSEISPILQFANFTCNQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVLRSEGPPSLKITAFASPSTHDELELSFTRENLKHFASEINMPF-XXXXXXXXXXXXXXXXXXXRGLESEATAVN--LPIGTFCNYPATFPSVLCFVKQLKPKIVVSLDRGCDRTDVPFPHHMIHALQSYSCLLESLDAVNVNLDALQKIERFL------VYPCIEKIVLGRHHSPERLPPWKSLFMQSGFAPLTFSNFTESQADCLVQ-RTPVKGFHVEKRQSSLALCWQRKELILATAWR 867 F E P L+FA+FT NQA+LEAFEG R+H+IDF + G QW +LMQ L LR GPP+ ++T P+ + L L A I++ F R ++EA AVN + P VL VKQ+KP I +++ + F +L YS L +SL+ V + D + E +L + C + RH E L W + F SG AP + QA L+ +G+ VE+ L L W + LI +AW+ Sbjct: 295 FYETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGLQWPALMQALALREGGPPTFRLTGIGPPAPDNSDHLHEVGCKLAQLAEAIHVEFEYRGFVANSLADLDASMLELRPSDTEAVAVNSVFELHKLLGRPGGIEKVLGVVKQIKPVIFTVVEQESNHNGPVFLDRFTESLHYYSTLFDSLEGVPNSQDKVMS-EVYLGKQICNLVACEGPDRVERH---ETLSQWGNRFGSSGLAPAHLGSNAFKQASMLLSVFNSGQGYRVEESNGCLMLGWHTRPLITTSAWK 581
BLAST of CX078582 vs. ExPASy Swiss-Prot
Match: GAI_SOLLC (DELLA protein GAI OS=Solanum lycopersicum GN=GAI PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 9.376e-27 Identity = 92/306 (30.07%), Postives = 130/306 (42.48%), Query Frame = 1 Query: 25 FSEISPILQFANFTCNQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVLRSEGPPSLKITAFASPSTHDELELSFTRENLKHFASEINMPF-XXXXXXXXXXXXXXXXXXXRGLESEATAVN--LPIGTFCNYPATFPSVLCFVKQLKPKIVVSLDRGCDRTDVPFPHHMIHALQSYSCLLESLDAVN---------------VNLDALQKIERFL------VYPCIEKIVLGRHHSPERLPPWKSLFMQSGFAPLTFSNFTESQADCLVQR-TPVKGFHVEKRQSSLALCWQRKELILATAWR 867 F E P L+FA+FT NQA+LEAF GCN++H+IDF + G QW +LMQ L LR GPP+ ++T P + L L A I + F R E+EA A+N + + P VL +KQ+ PKIV +++ + F AL YS + +SL++ VN L E +L V C + RH E L W+ SGF P+ + QA L+ G+ VE+ L L W + LI +AW+ Sbjct: 272 FYETCPYLKFAHFTANQAILEAFTGCNKVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLAETIGVEFEFRGFVANSLADLDATILDIRPSETEAVAINSVFELHRLLSRPGAIEKVLNSIKQINPKIVTLVEQEANHNAGVFIDRFNEALHYYSTMFDSLESSGSSSSASPTGILPQPPVNNQDLVMSEVYLGRQICNVVACEGSDRVERH---ETLNQWRVRMNSSGFDPVHLGSNAFKQASMLLALFAGGDGYRVEENDGCLMLGWHTRPLIATSAWK 574
BLAST of CX078582 vs. ExPASy Swiss-Prot
Match: RGA2_BRACM (DELLA protein RGA2 OS=Brassica campestris GN=RGA2 PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.225e-26 Identity = 92/291 (31.62%), Postives = 127/291 (43.64%), Query Frame = 1 Query: 25 FSEISPILQFANFTCNQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVLRSEGPPSLKITAFASPSTHDELELSFTRENLKHFASEINMPF-XXXXXXXXXXXXXXXXXXXRGLESEATAVN--LPIGTFCNYPATFPSVLCFVKQLKPKIVVSLDRGCDRTDVPFPHHMIHALQSYSCLLESLDAVNVNLDALQKIERFL------VYPCIEKIVLGRHHSPERLPPWKSLFMQSGFAPLTFSNFTESQADCLVQR-TPVKGFHVEKRQSSLALCWQRKELILATAWR 867 F E P L+FA+FT NQA+LEAFEG R+H+IDF + G QW +LMQ L LR GPP ++T P+ + L L A I++ F R E EA AVN + VL VKQ+KP I +++ F +L YS L +SL+ V + D + E +L + C + RH E L W + F SGFAP + QA L+ +G+ VE+ L L W + LI +AW+ Sbjct: 288 FYETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGLQWPALMQALALREGGPPVFRLTGIGPPAADNSDHLHEVGCKLAQLAEAIHVEFEYRGFVANSLADLDASMLELRPSEIEAVAVNSVFELHKLLGRTGGIEKVLGVVKQIKPVIFTVVEQESSHNGPVFLDRFTESLHYYSTLFDSLEGVPSSQDKVMS-EVYLGKQICNLVACEGPDRVERH---ETLSQWANRFGSSGFAPAHLGSNAFKQASMLLALFNGGEGYRVEENNGCLMLGWHTRPLITTSAWK 574 The following BLAST results are available for this feature:
BLAST of CX078582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX078582 ID=CX078582; Name=CX078582; organism=Citrus sinensis; type=EST; length=880bpback to top |