CX078580

Overview
NameCX078580
Unique NameCX078580
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4959 contig Csv1_Contig4959:175..1051. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: DRS7B_XENTR (Dehydrogenase/reductase SDR family member 7B OS=Xenopus tropicalis GN=dhrs7b PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.703e-20
Identity = 51/132 (38.64%), Postives = 77/132 (58.33%), Query Frame = -2
Query:  478 ESVSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRSNFGSNSMEG 873
            E+V+SA   I+   GR+DIL+NNAGI+  G + +  +   R   + N  G + L + ++P M   R G IV ++SV GK+  P+  +Y ASK A  A  D LR E+ P+ IDV  V PG +++N   N++ G
Sbjct:  104 EAVNSAANEILHLTGRVDILINNAGISYRGTILDTKVSVDRMVMDTNYFGPVALTKALIPSMIKNRRGHIVVISSVQGKISIPFRSAYSASKHATQAFFDCLRAEMSPYEIDVTVVNPGYIKTNLSLNAVTG 235          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: DRS7B_XENLA (Dehydrogenase/reductase SDR family member 7B OS=Xenopus laevis GN=dhrs7b PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.703e-20
Identity = 50/132 (37.88%), Postives = 78/132 (59.09%), Query Frame = -2
Query:  478 ESVSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRSNFGSNSMEG 873
            E+V++A K I+   GR+DIL+NNAGI+  G + +  +   R   + N  G + L + ++P M   R G +V ++SV GK+  P+  +Y ASK A  A  D LR E+ P+ IDV  V PG +++N   N++ G
Sbjct:  104 EAVNTAAKEILHLAGRVDILINNAGISYRGTILDTKVSVDRMVMDTNYFGPVALTKALLPSMIKNRRGHVVVISSVQGKISIPFRSAYSASKHATQAFFDCLRAEMSPYDIDVTVVNPGYIKTNLSLNAVTG 235          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: DHRS7_HUMAN (Dehydrogenase/reductase SDR family member 7 OS=Homo sapiens GN=DHRS7 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.471e-20
Identity = 54/132 (40.91%), Postives = 77/132 (58.33%), Query Frame = -2
Query:  478 SVSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPF-GIDVVKVLPGAVRSNFGSNSMEG 870
            S  +A K ++ + GRIDILVNN G++      +  LD  RK  E+N LG + L + V+P+M  R+ G IV V S++G +  P +  YCASK A+    + LR EL  + GI V  + PG V+SN   NS+ G
Sbjct:  117 SHEAATKAVLQEFGRIDILVNNGGMSQRSLCMDTSLDVYRKLIELNYLGTVSLTKCVLPHMIERKQGKIVTVNSILGIISVPLSIGYCASKHALRGFFNGLRTELATYPGIIVSNICPGPVQSNIVENSLAG 248          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: DRS7B_DANRE (Dehydrogenase/reductase SDR family member 7B OS=Danio rerio GN=dhrs7b PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.478e-19
Identity = 64/215 (29.77%), Postives = 101/215 (46.98%), Query Frame = -2
Query:  226 VSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRSNFGSNSMEGLRNHDWKLYKEFKEAIAERARASQGGKSTDATLFARHVAKKVLSPRPPKQIA-FGHMTGLFAMLSWSPLWVRDLFFSTRFSLNKE 867
            V SA   I+ + G +D+L+N AG++  G + +  +   R+  E N  G + L Q ++P M  R SG IV ++SV GK+  P+  +Y ASK A+ A  D LR E+   G+ V  + PG VR+N   N++ G            K  + +R  A+      D    A+ + K V   +    +A  G  T ++    W  L+ R +    R    KE
Sbjct:  107 VCSAAAEILKRHGHVDVLINIAGVSYRGNILDTHVSVQREVMETNYFGPVALTQAILPSMVDRGSGHIVVISSVQGKISIPYRSAYAASKHAMQAYYDCLRAEVDSLGLHVSVLSPGYVRTNMSINAVTG---------DGSKYGVMDRTTAT----GADPVDVAKDILKAVCQKKKDVVMAGLGPTTAIYLRTLWPALYFRVMASRARKQTGKE 308          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: DRS7B_RAT (Dehydrogenase/reductase SDR family member 7B OS=Rattus norvegicus GN=Dhrs7b PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.220e-18
Identity = 46/129 (35.66%), Postives = 76/129 (58.91%), Query Frame = -2
Query:  484 SVSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRSNFGSNSM 870
            +++ A   I+   G +DIL+NNAGI+  G +++  +D  RK  EIN  G + L + ++P M  R+ G IV ++S+ GK+  P+  +Y ASK A  A  D LR E++   I+V  + PG + +N   N++
Sbjct:  121 AIAPAAAEILQCFGYVDILINNAGISYRGAISDTIVDVDRKVMEINYFGPVALTKALLPSMVERKRGHIVAISSIQGKISIPFRSAYAASKHATQAFFDCLRAEMKDSDIEVTVISPGYIHTNLSVNAV 249          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: DRS7B_MOUSE (Dehydrogenase/reductase SDR family member 7B OS=Mus musculus GN=Dhrs7b PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.719e-18
Identity = 45/129 (34.88%), Postives = 75/129 (58.14%), Query Frame = -2
Query:  484 SVSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRSNFGSNSM 870
            ++++A   I+   G +D+L+NNAGI+  G +++  +D  RK  EIN  G + L + ++P M  R+ G IV ++S+ GK+  P+  +Y ASK A  A  D LR E+    I V  + PG + +N   N++
Sbjct:  119 TIAAAAAEILQCFGYVDVLINNAGISYRGTISDTIVDVDRKVMEINYFGPVALTKALLPSMVERKQGHIVAISSIQGKISIPFRSAYSASKHATQAFFDCLRAEMEEANIKVTVISPGYIHTNLSVNAV 247          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: DRS7B_PONAB (Dehydrogenase/reductase SDR family member 7B OS=Pongo abelii GN=DHRS7B PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 6.057e-18
Identity = 45/129 (34.88%), Postives = 74/129 (57.36%), Query Frame = -2
Query:  484 SVSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRSNFGSNSM 870
            ++ +A   I+   G +DILVNNAGI+  G + +  +D  ++  E N  G + L + ++P M  RR G IV ++S+ GK+  P+  +Y ASK A  A  D LR E+  + I+V  + PG + +N   N++
Sbjct:  121 AIVAAAAEILQCFGYVDILVNNAGISYRGTIMDTTVDVDKRVMETNYFGPVALTKALLPSMIKRRQGHIVAISSIQGKISIPFRSAYAASKHATQAFFDCLRAEMEQYEIEVTVISPGYIHTNLSVNAV 249          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: DRS7B_HUMAN (Dehydrogenase/reductase SDR family member 7B OS=Homo sapiens GN=DHRS7B PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 1.033e-17
Identity = 45/129 (34.88%), Postives = 74/129 (57.36%), Query Frame = -2
Query:  484 SVSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRSNFGSNSM 870
            ++ +A   I+   G +DILVNNAGI+  G + +  +D  ++  E N  G + L + ++P M  RR G IV ++S+ GK+  P+  +Y ASK A  A  D LR E+  + I+V  + PG + +N   N++
Sbjct:  121 AIVAAAAEILQCFGYVDILVNNAGISYRGTIMDTTVDVDKRVMETNYFGPVALTKALLPSMIKRRQGHIVAISSIQGKMSIPFRSAYAASKHATQAFFDCLRAEMEQYEIEVTVISPGYIHTNLSVNAI 249          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: DRS7B_BOVIN (Dehydrogenase/reductase SDR family member 7B OS=Bos taurus GN=DHRS7B PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.006e-17
Identity = 42/129 (32.56%), Postives = 72/129 (55.81%), Query Frame = -2
Query:  484 SVSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRSNFGSNSM 870
            +++ A   I+   G +D+L+NNAGI+  G + +   D  ++  E N  G + L + ++P M  RR G +V ++S+ GK+  P+  +Y ASK A  A  D LR E+    I+V  + PG + +N   N++
Sbjct:  121 AIAGAASEILQCFGHVDVLINNAGISYRGAIVDTSPDVDKRVMETNYFGPVALTKALLPAMIRRRQGHVVAISSIQGKISLPFRSAYAASKHATQAFFDCLRAEVEQHDIEVTVISPGYIHTNLSLNAV 249          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: YQJQ_BACSU (Uncharacterized oxidoreductase yqjQ OS=Bacillus subtilis GN=yqjQ PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.926e-17
Identity = 45/126 (35.71%), Postives = 75/126 (59.52%), Query Frame = -2
Query:  478 VKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRSNFGSNSMEG 855
            +  +  +IG ID+L+NNAG      + +  LD ++  +++N  G +   + V+P M  ++ G I+N+AS  GK+ TP +  Y A+K AVL  S+ LR+EL   GI V  V PG ++++F S + +G
Sbjct:   71 IARVRDQIGSIDVLINNAGFGIFETVLDSTLDDMKAMFDVNVFGLIACTKAVLPQMLEQKKGHIINIASQAGKIATPKSSLYSATKHAVLGYSNALRMELSGTGIYVTTVNPGPIQTDFFSIADKG 196          
The following BLAST results are available for this feature:
BLAST of CX078580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 128
Match NameE-valueIdentityDescription
DRS7B_XENTR1.703e-2038.64Dehydrogenase/reductase SDR family member 7B OS=Xe... [more]
DRS7B_XENLA1.703e-2037.88Dehydrogenase/reductase SDR family member 7B OS=Xe... [more]
DHRS7_HUMAN6.471e-2040.91Dehydrogenase/reductase SDR family member 7 OS=Hom... [more]
DRS7B_DANRE5.478e-1929.77Dehydrogenase/reductase SDR family member 7B OS=Da... [more]
DRS7B_RAT1.220e-1835.66Dehydrogenase/reductase SDR family member 7B OS=Ra... [more]
DRS7B_MOUSE2.719e-1834.88Dehydrogenase/reductase SDR family member 7B OS=Mu... [more]
DRS7B_PONAB6.057e-1834.88Dehydrogenase/reductase SDR family member 7B OS=Po... [more]
DRS7B_HUMAN1.033e-1734.88Dehydrogenase/reductase SDR family member 7B OS=Ho... [more]
DRS7B_BOVIN3.006e-1732.56Dehydrogenase/reductase SDR family member 7B OS=Bo... [more]
YQJQ_BACSU3.926e-1735.71Uncharacterized oxidoreductase yqjQ OS=Bacillus su... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_9H09_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-9H09-O17-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078580 ID=CX078580; Name=CX078580; organism=Citrus sinensis; type=EST; length=877bp
CAAAGTAATTTTATAAAAATTTAATAAAAACTCTTATTGACAACTAAACA
ACTAAATTTTTTTATGTAAAAGCTCTATCATCAAAAGATTTACTTAAATA
AGCTCTATTTAAAGCTGTACCAAATAGAGCCTAAATCTAATGGCGTCAAA
TTTATGAAGTACATGTGAACATTCTTCTAATTATTTATAAAATAGTAAAT
GGCAAACAGCCCCAAATCTTTAGACCTCCTTGTTTAGACTAAAACGAGTC
GAAAAGAACAAATCTCTCACCCAAAGTGGAGACCAAGAAAGCATAGCAAA
TAAACCAGTCATGTGACCGAATGCAATTTGCTTTGGTGGTCTGGGACTCA
AAACTTTCTTCGCCACATGCCTTGCGAACAAAGTAGCATCAGTTGATTTA
CCACCCTGAGAAGCCCTAGCTCGCTCGGCAATAGCCTCTTTGAATTCCTT
GTAGAGTTTCCAATCATGATTCCTCAAACCTTCCATGCTATTACTGCCAA
AATTTGATCTTACAGCACCAGGGAGTACTTTCACTACATCAATACCAAAA
GGCCTTAATTCAACGCGCAAAGTATCGGACATGGCAAGCACTGCAGCCTT
GCTAGCACAATAAGACCCTGCCCACGGTGTTGGCACTTTTCCTACAACAC
TTGCTACATTTACGATGCTCCCACTGCGCCTTGAAGCCATGTATGGAACA
ACATTTTGCACCAACCTTAATTGCCCTAATGTGTTAATTTCCCAAGCTTT
CCTTATAGCGTCTAGTGGAAGCTCGGCTAGAGGGCCGGCACTTGCTATAC
CAGCATTGTTGACCAGAATGTCTATACGGCCAATTTTTGACATGATTGTT
TTCACTGCTGATGATACACTTTCATCT
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