CX078574

Overview
NameCX078574
Unique NameCX078574
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length579
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3393 contig Csv1_Contig3393:705..1283. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX078574 vs. ExPASy Swiss-Prot
Match: NAT6_ARATH (Nucleobase-ascorbate transporter 6 OS=Arabidopsis thaliana GN=NAT6 PE=2 SV=2)

HSP 1 Score: 321.242 bits (822), Expect = 2.209e-87
Identity = 156/182 (85.71%), Postives = 170/182 (93.41%), Query Frame = 2
Query:   32 LLLLVWQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGK 577
            +L+ V QYLPHVIK GKN+FDRFAVIF+VVIVWIYAHLLTVGGAYN AAP TQ SCRTDRAG+I AAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAF AV+RYASAT +PPS+LSRG+GWQG+ IL+SGLFGT  G+SVSVENAGLLALTRVGSRRVVQI+AGFMIFFS+LGK
Sbjct:  201 ILVFVSQYLPHVIKSGKNVFDRFAVIFAVVIVWIYAHLLTVGGAYNGAAPTTQTSCRTDRAGIIGAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFVAVSRYASATMLPPSILSRGIGWQGVAILISGLFGTGAGSSVSVENAGLLALTRVGSRRVVQIAAGFMIFFSILGK 382          
BLAST of CX078574 vs. ExPASy Swiss-Prot
Match: NAT5_ARATH (Nucleobase-ascorbate transporter 5 OS=Arabidopsis thaliana GN=NAT5 PE=2 SV=1)

HSP 1 Score: 299.671 bits (766), Expect = 6.883e-81
Identity = 146/182 (80.22%), Postives = 162/182 (89.01%), Query Frame = 2
Query:   32 LLLLVWQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGK 577
            +L+L+ QY+PHVIK GK++F RFAVIFSV IVW+YA  LT+GGAYN     TQ SCRTDRAGLI AAPWIRVPWPFQWGAP FDAGEAFAMMMASFVALVESTGAF AV+RYASAT  PPSV+SRGVGWQG+ IL+SGLFGT  G+SVSVENAGLLALT++GSRRVVQISAGFMIFFS+LGK
Sbjct:  197 ILILISQYMPHVIKGGKHVFARFAVIFSVAIVWLYAFFLTLGGAYNGVGTDTQRSCRTDRAGLISAAPWIRVPWPFQWGAPLFDAGEAFAMMMASFVALVESTGAFIAVSRYASATMPPPSVISRGVGWQGVAILISGLFGTGIGSSVSVENAGLLALTKIGSRRVVQISAGFMIFFSILGK 378          
BLAST of CX078574 vs. ExPASy Swiss-Prot
Match: NAT7_ARATH (Nucleobase-ascorbate transporter 7 OS=Arabidopsis thaliana GN=NAT7 PE=2 SV=2)

HSP 1 Score: 286.189 bits (731), Expect = 7.875e-77
Identity = 138/182 (75.82%), Postives = 156/182 (85.71%), Query Frame = 2
Query:   32 LLLLVWQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGK 577
            LLLL  QY+PH+I+  + +F RFAVIFSVVIVWIYAHLLTVGGAY +    TQ SCRTDR+GLI  +PWIRVP+PFQWG P+F AGEAFAMM  SFV+L+ESTG +  V+R+ASATP PPSVLSRGVGWQG+G+LL GLFG  NG SVSVENAGLLALTRVGSRRVVQISAGFMIFFS+LGK
Sbjct:  207 LLLLFSQYIPHLIRGERQVFHRFAVIFSVVIVWIYAHLLTVGGAYKNTGVNTQTSCRTDRSGLISGSPWIRVPYPFQWGPPTFHAGEAFAMMAVSFVSLIESTGTYIVVSRFASATPPPPSVLSRGVGWQGVGVLLCGLFGAGNGASVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGK 388          
BLAST of CX078574 vs. ExPASy Swiss-Prot
Match: NAT8_ARATH (Nucleobase-ascorbate transporter 8 OS=Arabidopsis thaliana GN=NAT8 PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 2.898e-71
Identity = 131/185 (70.81%), Postives = 158/185 (85.41%), Query Frame = 2
Query:   32 LLLLVWQYLPHVIKRG--KNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWG-APSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGK 577
            LL++  QY+PH+++     N F RFAVIFSVVIVW+YA++LT+GGAY++    TQ SCRTDRAG+I A+PWIRVP P QWG AP+F+AG+ FAMM ASFV+LVESTG + AV+RYASATP+PPSVLSRG+GWQG GILL GLFG  N TSVSVENAGLLA+TRVGSRRV+Q++AGFMIFFS+LGK
Sbjct:  205 LLVIFSQYIPHLMQGETCSNFFHRFAVIFSVVIVWLYAYILTIGGAYSNTEINTQISCRTDRAGIISASPWIRVPHPIQWGGAPTFNAGDIFAMMAASFVSLVESTGTYIAVSRYASATPIPPSVLSRGIGWQGFGILLCGLFGAGNATSVSVENAGLLAVTRVGSRRVIQVAAGFMIFFSILGK 389          
BLAST of CX078574 vs. ExPASy Swiss-Prot
Match: NAT4_ARATH (Nucleobase-ascorbate transporter 4 OS=Arabidopsis thaliana GN=NAT4 PE=2 SV=2)

HSP 1 Score: 249.595 bits (636), Expect = 8.168e-66
Identity = 113/182 (62.09%), Postives = 148/182 (81.32%), Query Frame = 2
Query:   32 LLLLVWQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGK 577
            +L+++ QYLPH+ K  ++I ++FAV+F++ IVW YA +LT  GAY+     TQ SCRTDR+GLI A+PW+R+P+P QWG PSF   +AFAMM A++VA+VE+TG+F A +R+ SAT +PPSVLSRG+GWQGIG+LL+GLFGT  G++  VEN GLL LT+VGSRRVVQISAGFMIFFS+ GK
Sbjct:  195 ILIILSQYLPHLFKCKRSICEQFAVLFTIAIVWAYAEILTAAGAYDKRPDNTQLSCRTDRSGLISASPWVRIPYPLQWGRPSFHGSDAFAMMAATYVAIVETTGSFIAASRFGSATHIPPSVLSRGIGWQGIGVLLNGLFGTATGSTALVENTGLLGLTKVGSRRVVQISAGFMIFFSIFGK 376          
BLAST of CX078574 vs. ExPASy Swiss-Prot
Match: NAT2_ARATH (Nucleobase-ascorbate transporter 2 OS=Arabidopsis thaliana GN=NAT2 PE=2 SV=2)

HSP 1 Score: 244.202 bits (622), Expect = 3.432e-64
Identity = 119/182 (65.38%), Postives = 145/182 (79.67%), Query Frame = 2
Query:   32 LLLLVWQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGK 577
            L ++  QYL +   R   + +RFA+I +++IVW YAH+LT  GAY     +TQ +CRTD + LI +APWI++P+P QWGAPSFDAG AFAMM A  V+L+ESTGAF A AR ASATP PP VLSRG+GWQGIGILL+GLFGT++G+SVSVEN GLL  TRVGSRRV+QISAGFMIFFS+LGK
Sbjct:  195 LFVIFSQYLKNFQFRQFPVVERFALIIALIIVWAYAHVLTASGAYKHRPHQTQLNCRTDMSNLISSAPWIKIPYPLQWGAPSFDAGHAFAMMAAVLVSLIESTGAFKAAARLASATPPPPHVLSRGIGWQGIGILLNGLFGTLSGSSVSVENIGLLGSTRVGSRRVIQISAGFMIFFSMLGK 376          
BLAST of CX078574 vs. ExPASy Swiss-Prot
Match: LPE1_MAIZE (Nucleobase-ascorbate transporter LPE1 OS=Zea mays GN=LPE1 PE=1 SV=2)

HSP 1 Score: 226.483 bits (576), Expect = 7.405e-59
Identity = 105/182 (57.69%), Postives = 137/182 (75.27%), Query Frame = 2
Query:   32 LLLLVWQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGK 577
            LL++  +Y  H+  +G  +F R AV+ +VVI+WIYA +LT  GAYN+  P TQ SCR DR+G+I  +PW+R P+PFQWG P F   + FAM+ ASF +L+ESTG   AV+RY+ AT  PPSV SRG+GW+GI I+L G+ GT+ GT+ SVENAGLLA+TRVGSRRV++ISA FMIFFS+  K
Sbjct:  196 LLVIFAEYASHLFAKGSFVFSRCAVLVTVVIIWIYAEILTAAGAYNERGPVTQFSCRADRSGIIQGSPWVRFPYPFQWGYPIFCFQDCFAMLAASFASLIESTGTLIAVSRYSGATFCPPSVFSRGIGWEGISIILDGMCGTLTGTAASVENAGLLAVTRVGSRRVIKISALFMIFFSLFAK 377          
BLAST of CX078574 vs. ExPASy Swiss-Prot
Match: NAT10_ARATH (Putative nucleobase-ascorbate transporter 10 OS=Arabidopsis thaliana GN=NAT10 PE=3 SV=2)

HSP 1 Score: 224.172 bits (570), Expect = 3.675e-58
Identity = 105/189 (55.56%), Postives = 136/189 (71.96%), Query Frame = 2
Query:   32 LLLLVWQYLPHVIKRGKNIF-------DRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGK 577
            LL+ V QYLP  +K  K +        DR+ +I  + +VW++A LLT  G Y+  +  TQ SCRTDR GLI   PWI +P+PFQWG+P+FD  ++FAMM ASFV L ESTG F+A ARY SATP+PPSV+SRG  W G+G+LL+G+ G + G + S EN GLLA+T++GSRRV+QISA FMIFFS+ GK
Sbjct:  205 LLIFVTQYLPRFLKMKKGVMILDGSRCDRYGMILCIPLVWLFAQLLTSSGVYDHKSHTTQTSCRTDRTGLITNTPWIYIPYPFQWGSPTFDITDSFAMMAASFVTLFESTGLFYASARYGSATPIPPSVVSRGTCWLGVGVLLNGMLGGITGITTSTENVGLLAMTKIGSRRVIQISAAFMIFFSIFGK 393          
BLAST of CX078574 vs. ExPASy Swiss-Prot
Match: NAT1_ARATH (Nucleobase-ascorbate transporter 1 OS=Arabidopsis thaliana GN=NAT1 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 9.052e-57
Identity = 110/183 (60.11%), Postives = 132/183 (72.13%), Query Frame = 2
Query:   32 LLLLVWQYLPHVIK-RGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGK 577
            L++ + QYL HV   +   IF+RF ++  V IVWIYA +LT  GAY      TQ SCRTD+A LI  APW + P+P QWG P+F  G +FAMM A  V++VESTGA+ A +R A ATP P  VLSRG+GWQGIG+LL GLFGT  G++V VEN GLL LTRVGSRRVVQ+SAGFMI FS LGK
Sbjct:  190 LVIGLTQYLKHVRPFKDVPIFERFPILICVTIVWIYAVILTASGAYRGKPSLTQHSCRTDKANLISTAPWFKFPYPLQWGPPTFSVGHSFAMMSAVLVSMVESTGAYIAASRLAIATPPPAYVLSRGIGWQGIGVLLDGLFGTGTGSTVLVENVGLLGLTRVGSRRVVQVSAGFMIVFSTLGK 372          
BLAST of CX078574 vs. ExPASy Swiss-Prot
Match: NAT3_ARATH (Nucleobase-ascorbate transporter 3 OS=Arabidopsis thaliana GN=NAT3 PE=2 SV=2)

HSP 1 Score: 213.001 bits (541), Expect = 8.472e-55
Identity = 100/182 (54.95%), Postives = 129/182 (70.88%), Query Frame = 2
Query:   32 LLLLVWQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGK 577
            LL++  QYL H   R   I +R+A++  + I+W +A +LTV GAYN+ +  T+ SCRTDRA L+ +APWIR+P+PFQWG P F A   F M  A+ VA  ESTG FFA +R A AT  P  V+SR +G QGIG+LL G+FG++ G + SVEN GLL LTR+GSRRVVQ+S  FMIFFS+ GK
Sbjct:  219 LLIITQQYLKHAFSRISMILERYALLVCLAIIWAFAAILTVSGAYNNVSTATKQSCRTDRAFLMSSAPWIRIPYPFQWGTPIFKASHVFGMFGAAIVASAESTGVFFAASRLAGATAPPAHVVSRSIGLQGIGVLLEGIFGSITGNTASVENVGLLGLTRIGSRRVVQVSTFFMIFFSIFGK 400          
The following BLAST results are available for this feature:
BLAST of CX078574 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
NAT6_ARATH2.209e-8785.71Nucleobase-ascorbate transporter 6 OS=Arabidopsis ... [more]
NAT5_ARATH6.883e-8180.22Nucleobase-ascorbate transporter 5 OS=Arabidopsis ... [more]
NAT7_ARATH7.875e-7775.82Nucleobase-ascorbate transporter 7 OS=Arabidopsis ... [more]
NAT8_ARATH2.898e-7170.81Nucleobase-ascorbate transporter 8 OS=Arabidopsis ... [more]
NAT4_ARATH8.168e-6662.09Nucleobase-ascorbate transporter 4 OS=Arabidopsis ... [more]
NAT2_ARATH3.432e-6465.38Nucleobase-ascorbate transporter 2 OS=Arabidopsis ... [more]
LPE1_MAIZE7.405e-5957.69Nucleobase-ascorbate transporter LPE1 OS=Zea mays ... [more]
NAT10_ARATH3.675e-5855.56Putative nucleobase-ascorbate transporter 10 OS=Ar... [more]
NAT1_ARATH9.052e-5760.11Nucleobase-ascorbate transporter 1 OS=Arabidopsis ... [more]
NAT3_ARATH8.472e-5554.95Nucleobase-ascorbate transporter 3 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_9H05_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-9H05-O9-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078574 ID=CX078574; Name=CX078574; organism=Citrus sinensis; type=EST; length=579bp
CTTTGTTATATTTATCCCTGAAGATTACTAATTGTTACTGCTTGTCTGGC
AGTATCTGCCTCATGTGATAAAACGTGGGAAAAATATCTTTGATCGTTTT
GCTGTCATATTTTCTGTGGTGATTGTGTGGATATATGCTCATCTACTTAC
TGTGGGTGGGGCTTATAATGATGCTGCCCCTAAGACACAAGCAAGCTGCC
GAACTGATCGTGCTGGTCTCATTGATGCTGCTCCCTGGATAAGAGTTCCG
TGGCCCTTCCAATGGGGGGCGCCTTCATTTGATGCTGGTGAAGCTTTTGC
CATGATGATGGCCTCCTTTGTTGCTCTTGTTGAGTCAACTGGTGCTTTTT
TTGCGGTAGCACGGTATGCAAGTGCAACTCCAATGCCACCTTCTGTTCTC
AGCCGTGGTGTGGGTTGGCAGGGAATTGGCATTTTGCTTTCTGGGTTATT
TGGAACTGTAAACGGAACATCGGTGTCTGTAGAGAATGCTGGTCTTTTGG
CCTTGACTAGAGTTGGCAGTCGAAGGGTTGTCCAAATATCTGCTGGATTC
ATGATATTCTTCTCTGTTCTTGGGAAATT
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