CX078573

Overview
NameCX078573
Unique NameCX078573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length807
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3393 contig Csv1_Contig3393:1185..1991. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX078573 vs. ExPASy Swiss-Prot
Match: NAT6_ARATH (Nucleobase-ascorbate transporter 6 OS=Arabidopsis thaliana GN=NAT6 PE=2 SV=2)

HSP 1 Score: 352.058 bits (902), Expect = 2.171e-96
Identity = 164/182 (90.11%), Postives = 174/182 (95.60%), Query Frame = -2
Query:  261 ENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNIPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPSV 806
            ENAGLLALTRVGSRRVVQI+AGFMIFFS+LGKFGAVFASIPAPI+AALYCLFFAYVGAGGLSFLQFCNLNSFR KFILGFS+F+GLS+PQYFNEYTAI G+GPVHT  RWFNDMVN+PFSSEPFVAG VAFFLDNTLHKKD  +RKDRG+HWWDKF SFKGDTRSEEFYSLPFNLNKYFPSV
Sbjct:  351 ENAGLLALTRVGSRRVVQIAAGFMIFFSILGKFGAVFASIPAPIIAALYCLFFAYVGAGGLSFLQFCNLNSFRTKFILGFSVFLGLSIPQYFNEYTAIKGYGPVHTGARWFNDMVNVPFSSEPFVAGSVAFFLDNTLHKKDSSIRKDRGKHWWDKFRSFKGDTRSEEFYSLPFNLNKYFPSV 532          
BLAST of CX078573 vs. ExPASy Swiss-Prot
Match: NAT5_ARATH (Nucleobase-ascorbate transporter 5 OS=Arabidopsis thaliana GN=NAT5 PE=2 SV=1)

HSP 1 Score: 334.339 bits (856), Expect = 4.684e-91
Identity = 151/182 (82.97%), Postives = 169/182 (92.86%), Query Frame = -2
Query:  261 ENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNIPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPSV 806
            ENAGLLALT++GSRRVVQISAGFMIFFS+LGKFGAVFASIP+PI+AALYCLFFAYVGAGGLS LQFCNLNSFR  FILGFSIF+GLS+PQYFNE+TAI G+GPVHT  RWFNDMVN+PFSS+ FV GCVA+ LD TLHKKDG +RKDRG+HWWD+FW+FK D R+EEFY+LPFNLNKYFPSV
Sbjct:  347 ENAGLLALTKIGSRRVVQISAGFMIFFSILGKFGAVFASIPSPIIAALYCLFFAYVGAGGLSLLQFCNLNSFRTLFILGFSIFLGLSIPQYFNEHTAIKGYGPVHTGARWFNDMVNVPFSSKAFVGGCVAYLLDTTLHKKDGSIRKDRGKHWWDRFWTFKNDPRTEEFYALPFNLNKYFPSV 528          
BLAST of CX078573 vs. ExPASy Swiss-Prot
Match: NAT7_ARATH (Nucleobase-ascorbate transporter 7 OS=Arabidopsis thaliana GN=NAT7 PE=2 SV=2)

HSP 1 Score: 320.857 bits (821), Expect = 5.359e-87
Identity = 149/182 (81.87%), Postives = 165/182 (90.66%), Query Frame = -2
Query:  261 ENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNIPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPSV 806
            ENAGLLALTRVGSRRVVQISAGFMIFFS+LGKFGA+FASIPAP+VAAL+CLFFAYVGAGGLS LQFCNLNSFR KFILGFS+F+GLS+PQYFN+YTA+N +GPVHT  RWFNDM+N+PFSS+ FVAG +AFFLD T+  KD   RKDRG  WWD+F SFK DTRSEEFYSLPFNLNKYFPSV
Sbjct:  357 ENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAIFASIPAPVVAALHCLFFAYVGAGGLSLLQFCNLNSFRTKFILGFSVFMGLSIPQYFNQYTAVNKYGPVHTHARWFNDMINVPFSSKAFVAGILAFFLDVTMSSKDSATRKDRGMFWWDRFMSFKSDTRSEEFYSLPFNLNKYFPSV 538          
BLAST of CX078573 vs. ExPASy Swiss-Prot
Match: NAT8_ARATH (Nucleobase-ascorbate transporter 8 OS=Arabidopsis thaliana GN=NAT8 PE=2 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 2.947e-77
Identity = 133/181 (73.48%), Postives = 157/181 (86.74%), Query Frame = -2
Query:  264 ENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNIPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPS 806
            ENAGLLA+TRVGSRRV+Q++AGFMIFFS+LGKFGA+FASIPAPIVAALYCLFF+YVGAGGLS +QFCNLNSFR KFILGFSIF+GLS+PQYF +YT +  +GPV TS  WFN+++N+PFSS+ FV+G +AFFLD TL  KD   +KDRG  WW +F SF+ D RSEEFYSLP NL+KYFPS
Sbjct:  358 ENAGLLAVTRVGSRRVIQVAAGFMIFFSILGKFGAIFASIPAPIVAALYCLFFSYVGAGGLSLIQFCNLNSFRTKFILGFSIFMGLSIPQYFYQYTTLETYGPVRTSATWFNNIINVPFSSKAFVSGILAFFLDTTLPPKDKTTKKDRGLVWWKRFKSFQSDNRSEEFYSLPLNLSKYFPS 538          
BLAST of CX078573 vs. ExPASy Swiss-Prot
Match: NAT4_ARATH (Nucleobase-ascorbate transporter 4 OS=Arabidopsis thaliana GN=NAT4 PE=2 SV=2)

HSP 1 Score: 240.35 bits (612), Expect = 9.205e-63
Identity = 120/181 (66.30%), Postives = 136/181 (75.14%), Query Frame = -2
Query:  264 ENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNIPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPS 806
            EN GLL LT+VGSRRVVQISAGFMIFFS+ GKFGAV ASIP PI AALYC+ FAYV + GL  LQFCNLNSFR KFILGFSIFIGLSV QYF EY  I+G GPVHT    FN ++ + FSS   V    AF LD T       VR+D GRHWW+KF  +  DTR+EEFY+LP+NLN++FPS
Sbjct:  345 ENTGLLGLTKVGSRRVVQISAGFMIFFSIFGKFGAVLASIPLPIFAALYCVLFAYVASAGLGLLQFCNLNSFRNKFILGFSIFIGLSVAQYFTEYLFISGRGPVHTRTSAFNVIMQVIFSSAATVGIMAAFLLDCTHSYGHASVRRDSGRHWWEKFRVYHTDTRTEEFYALPYNLNRFFPS 525          
BLAST of CX078573 vs. ExPASy Swiss-Prot
Match: LPE1_MAIZE (Nucleobase-ascorbate transporter LPE1 OS=Zea mays GN=LPE1 PE=1 SV=2)

HSP 1 Score: 226.868 bits (577), Expect = 1.053e-58
Identity = 113/182 (62.09%), Postives = 133/182 (73.08%), Query Frame = -2
Query:  261 ENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNIPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPSV 806
            ENAGLLA+TRVGSRRV++ISA FMIFFS+  KFGAV ASIP PI AALYC+ FAY    G S LQ+CNLNS R KFIL  S+F+GLS+PQYF  Y    GFGPVHT    FN MVN+ FSS   VA  +A+ LD T    +  V+KDRG  WW+KF S+K D RSEEFY LP+ L++YFPS+
Sbjct:  346 ENAGLLAVTRVGSRRVIKISALFMIFFSLFAKFGAVLASIPLPIFAALYCVLFAYSAGAGFSLLQYCNLNSLRTKFILSISLFLGLSIPQYFRVYEMFFGFGPVHTHSVAFNVMVNVIFSSPATVAAILAYLLDCTHLYWEASVKKDRGWFWWEKFKSYKYDGRSEEFYRLPYGLSRYFPSL 527          
BLAST of CX078573 vs. ExPASy Swiss-Prot
Match: NAT2_ARATH (Nucleobase-ascorbate transporter 2 OS=Arabidopsis thaliana GN=NAT2 PE=2 SV=2)

HSP 1 Score: 226.483 bits (576), Expect = 1.375e-58
Identity = 111/180 (61.67%), Postives = 136/180 (75.56%), Query Frame = -2
Query:  267 ENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNIPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFP 806
            EN GLL  TRVGSRRV+QISAGFMIFFS+LGKFGA+FASIP  I AA+YC+ F  V + GLSFLQF N+NS R  FI+G S+F+GLS+P+YF +++     GP HT+  WFND +N  F S P VA  VA FLDNTL  K  +  +DRG  WW KF +FKGD+R+EEFY+LPFNLN++FP
Sbjct:  345 ENIGLLGSTRVGSRRVIQISAGFMIFFSMLGKFGALFASIPFTIFAAVYCVLFGLVASVGLSFLQFTNMNSLRNLFIVGVSLFLGLSIPEYFRDFSMKALHGPAHTNAGWFNDFLNTIFLSSPMVALMVAVFLDNTLDYK--ETARDRGLPWWAKFRTFKGDSRNEEFYTLPFNLNRFFP 522          
BLAST of CX078573 vs. ExPASy Swiss-Prot
Match: NAT1_ARATH (Nucleobase-ascorbate transporter 1 OS=Arabidopsis thaliana GN=NAT1 PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.090e-55
Identity = 106/180 (58.89%), Postives = 131/180 (72.78%), Query Frame = -2
Query:  267 ENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNIPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFP 806
            EN GLL LTRVGSRRVVQ+SAGFMI FS LGKFGAVFASIP PI AAL+C+ F  V A GLSFLQF N+NS R   I G S+F+G+S+PQ+F +Y     +G VHT+  WFN  +N  F S   V   +A F+DNT+  +  + +KDRG  WW KF +F+GD R+EEFY+LPFNLN++FP
Sbjct:  341 ENVGLLGLTRVGSRRVVQVSAGFMIVFSTLGKFGAVFASIPVPIYAALHCILFGLVAAVGLSFLQFTNMNSMRNLMITGLSLFLGISIPQFFAQYWDARHYGLVHTNAGWFNAFLNTLFMSPATVGLIIAVFMDNTMEVE--RSKKDRGMPWWVKFRTFRGDNRNEEFYTLPFNLNRFFP 518          
BLAST of CX078573 vs. ExPASy Swiss-Prot
Match: NAT10_ARATH (Putative nucleobase-ascorbate transporter 10 OS=Arabidopsis thaliana GN=NAT10 PE=3 SV=2)

HSP 1 Score: 211.46 bits (537), Expect = 4.579e-54
Identity = 101/181 (55.80%), Postives = 126/181 (69.61%), Query Frame = -2
Query:  264 ENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNIPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPS 806
            EN GLLA+T++GSRRV+QISA FMIFFS+ GKFGA FASIP PI+A+LYC+   +V + GLS+LQFCNLNSF +KFILGFS F+ +S+PQYF EY   NG         W  DM+ + F S   VA  +A  LD TL +   + +KD G  WWDKF  +  D R++EFY LP  LNK+FPS
Sbjct:  362 ENVGLLAMTKIGSRRVIQISAAFMIFFSIFGKFGAFFASIPLPIMASLYCIVLCFVSSVGLSYLQFCNLNSFNIKFILGFSFFMAISIPQYFREY--YNGGWRSDHHSNWLEDMIRVIFMSHTTVAAIIAIVLDCTLCRDSDEAKKDCGMKWWDKFRLYNLDVRNDEFYGLPCRLNKFFPS 540          
BLAST of CX078573 vs. ExPASy Swiss-Prot
Match: NAT3_ARATH (Nucleobase-ascorbate transporter 3 OS=Arabidopsis thaliana GN=NAT3 PE=2 SV=2)

HSP 1 Score: 189.889 bits (481), Expect = 1.427e-47
Identity = 93/181 (51.38%), Postives = 121/181 (66.85%), Query Frame = -2
Query:  264 ENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNIPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPS 806
            EN GLL LTR+GSRRVVQ+S  FMIFFS+ GKFGA FASIP PI A +YC+    V A G+SF+QF + NS R  +++G S+F+ LS+ QYF   T+  G+GPV T+G WFND++N  F+S P VA  +A  LDNTL  +       RG  WW  F    GD R++EFYS+P  +N+  P+
Sbjct:  369 ENVGLLGLTRIGSRRVVQVSTFFMIFFSIFGKFGAFFASIPLPIFAGVYCILLGIVVAVGISFIQFTDTNSMRNMYVIGVSLFLSLSIAQYFLANTSRAGYGPVRTAGGWFNDILNTIFASAPLVATILATILDNTLEARHAS-DDARGIPWWKPFQHRNGDGRNDEFYSMPLRINELMPT 548          
The following BLAST results are available for this feature:
BLAST of CX078573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
NAT6_ARATH2.171e-9690.11Nucleobase-ascorbate transporter 6 OS=Arabidopsis ... [more]
NAT5_ARATH4.684e-9182.97Nucleobase-ascorbate transporter 5 OS=Arabidopsis ... [more]
NAT7_ARATH5.359e-8781.87Nucleobase-ascorbate transporter 7 OS=Arabidopsis ... [more]
NAT8_ARATH2.947e-7773.48Nucleobase-ascorbate transporter 8 OS=Arabidopsis ... [more]
NAT4_ARATH9.205e-6366.30Nucleobase-ascorbate transporter 4 OS=Arabidopsis ... [more]
LPE1_MAIZE1.053e-5862.09Nucleobase-ascorbate transporter LPE1 OS=Zea mays ... [more]
NAT2_ARATH1.375e-5861.67Nucleobase-ascorbate transporter 2 OS=Arabidopsis ... [more]
NAT1_ARATH1.090e-5558.89Nucleobase-ascorbate transporter 1 OS=Arabidopsis ... [more]
NAT10_ARATH4.579e-5455.80Putative nucleobase-ascorbate transporter 10 OS=Ar... [more]
NAT3_ARATH1.427e-4751.38Nucleobase-ascorbate transporter 3 OS=Arabidopsis ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_9H05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-9H05-O9-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078573 ID=CX078573; Name=CX078573; organism=Citrus sinensis; type=EST; length=807bp
TTTTTTTTTTTTTTTTTGAAAAAGCAAATATAATTGCTTCATTGCTACTT
CGAATCCATCAGTCTCCGGTTGGATTTACAGAAAAGAAAAAAACAGTTCA
ACAAATGCTCTAAGGCACATCCTATAAAGGAAGGTACTATCTTTTACTGC
TATAGCGTGTAATAAGAGATTCACAAGAGAGCAATGATGATATTTTGTGT
GTTCCCACAAGGACTTTTGGAAAACTTCCCAAAGAGCAATACATGTTACC
GATTGAATCACACAGATGGGAAATATTTGTTTAAATTGAAGGGCAGGGAG
TAAAATTCTTCACTTCTTGTGTCGCCTTTGAAGGACCAGAACTTGTCCCA
CCAATGCCTACCCCTGTCTTTCCTGACTTGACCATCCTTTTTATGCAGTG
TGTTGTCGAGGAAAAATGCCACACAACCAGCAACAAATGGTTCTGACGAG
AAAGGAATGTTTACCATATCGTTGAACCATCTTCCACTAGTGTGAACTGG
ACCGAAACCATTAATGGCAGTGTACTCATTGAAGTATTGGGGCACAGACA
GACCGATGAAGATAGAGAAGCCTAATATGAACTTTACTCGGAAACTGTTG
AGGTTACAGAACTGAAGGAAGCTAAGACCTCCAGCACCCACATATGCAAA
GAAAAGGCAATATAAAGCAGCAACAATCGGTGCTGGAATTGAAGCAAAGA
CTGCTCCAAATTTCCCAAGAACAGAGAAGAATATCATGAATCCAGCAGAT
ATTTGGACAACCCTTCGACTGCCAACTCTAGTCAAGGCCAAAAGACCAGC
ATTCTCT
back to top