CX078571
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX078571 vs. ExPASy Swiss-Prot
Match: PTH2_BOVIN (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Bos taurus GN=PTRH2 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 3.013e-28 Identity = 66/153 (43.14%), Postives = 97/153 (63.40%), Query Frame = -3 Query: 387 FGMLLDLSKPGKNYVKKKNFLPRKPQEQVSVSSDGDQ-DLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRL 842 FGML K+ V++ N P + S G+ + K++LVVR DLKMG GK+A+QC+HAA Y ++ + + LL++WE CGQPK+VV +++ + +L A+ GL ++ DAGRTQ++ GS+TVL IGPGP L+D VTG +L Sbjct: 37 FGML------PKSSVRETN-----PDTETEASILGESGEYKMILVVRNDLKMGKGKVAAQCSHAAVSAYKQIQRRNPELLKEWEYCGQPKVVVKAPDEETLVELLTHAKVLGLTVSLIQDAGRTQIAPGSRTVLGIGPGPADLIDKVTGHLKL 178
BLAST of CX078571 vs. ExPASy Swiss-Prot
Match: PTH2_HUMAN (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Homo sapiens GN=PTRH2 PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.936e-28 Identity = 66/162 (40.74%), Postives = 97/162 (59.88%), Query Frame = -3 Query: 387 GLVIGFIFGMLLDLSKP---GKNYVKKKNFLPRKPQEQVSVSSDGDQDLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRL 863 GL +G GM L S G K + + + S+ D + K++LVVR DLKMG GK+A+QC+HAA Y ++ + + +L++WE CGQPK+VV +++ + L A+ GL ++ DAGRTQ++ GS+TVL IGPGP L+D VTG +L Sbjct: 18 GLAVGVACGMCLGWSLRVCFGMLPKSKTSKTHTDTESEASILGDSGE-YKMILVVRNDLKMGKGKVAAQCSHAAVSAYKQIQRRNPEMLKQWEYCGQPKVVVKAPDEETLIALLAHAKMLGLTVSLIQDAGRTQIAPGSQTVLGIGPGPADLIDKVTGHLKL 178
BLAST of CX078571 vs. ExPASy Swiss-Prot
Match: PTH2_MOUSE (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Mus musculus GN=Ptrh2 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 9.694e-27 Identity = 55/115 (47.83%), Postives = 78/115 (67.83%), Query Frame = -3 Query: 387 DLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRL 731 + K++LVVR DLKMG GK+A+QC+HAA Y + + +L++WE CGQPK+VV ++ + +L A+ GL ++ DAGRTQ+ GS+TVL IGPGP L+D VTG +L Sbjct: 66 EYKMILVVRTDLKMGKGKVAAQCSHAAVSAYKQTQRRSPQVLKEWEYCGQPKVVVKAPDEDTLIQLLTHAKTLGLTVSLIQDAGRTQIEPGSRTVLGIGPGPVELIDEVTGHLKL 180
BLAST of CX078571 vs. ExPASy Swiss-Prot
Match: PTH2_SCHPO (Probable peptidyl-tRNA hydrolase 2 OS=Schizosaccharomyces pombe GN=SPAC19A8.14 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 4.073e-25 Identity = 71/195 (36.41%), Postives = 100/195 (51.28%), Query Frame = -3 Query: 387 VSFRPENFIPGLVIGFIFGMLLDLSKPGKNYVKKKNFLPRKPQEQ--VSVSSDGDQD------------------------LKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRL 893 +S P + G V+GF+ G ++ + Y K P+++ VSVS+D D + K+VLVVR DL M GKIA+QCAHAA Y D L+R WE GQ KI + + ++ + L A + GL V+ DAGRTQ+++GS TVL IGPGP S+++ VTG +L Sbjct: 10 ISSFPAAVLVGAVVGFMIGRKYSVADASRGYSSKNANKASNPEKESPVSVSNDEDSESETELLDMLKGNSSLAALALAEGQTKMVLVVRTDLGMTKGKIAAQCAHAALACYKIASAVDPDLVRIWENAGQAKITLQAQTEETLELLQAQAMSLGLCARVIHDAGRTQIASGSATVLGIGPGPVSVINEVTGSLKL 204
BLAST of CX078571 vs. ExPASy Swiss-Prot
Match: PTH2_DROME (Probable peptidyl-tRNA hydrolase 2 OS=Drosophila melanogaster GN=CG1307 PE=1 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 6.947e-25 Identity = 61/130 (46.92%), Postives = 80/130 (61.54%), Query Frame = -3 Query: 384 QVSVSSDG----DQDLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 761 + SVS G + + K+VLVVR DLKMG GKIA+QC H A G Y + LLR WE CG KI V +++ E+ + + AE L T ++ DAGRTQ+ A SKTVLA+GP + +D VTG +LL Sbjct: 57 EASVSDKGYGGLNDNFKMVLVVRNDLKMGKGKIAAQCGHGAVGAYQRAVVRTPRLLRSWENCGCAKIAVRVESEAELMAIKKEAERQQLNTCLIRDAGRTQIEANSKTVLAVGPAAAADIDRVTGHLKLL 186
BLAST of CX078571 vs. ExPASy Swiss-Prot
Match: PTH_SULTO (Peptidyl-tRNA hydrolase OS=Sulfolobus tokodaii GN=pth PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 8.492e-23 Identity = 56/118 (47.46%), Postives = 75/118 (63.56%), Query Frame = -3 Query: 384 KLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHL----LRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 725 K+V+VVR DL MG GKIA+Q AHAA + +++ S L L KW + GQPKIVV + E+NK +E A LPT ++ DAG+TQ+ G+ T + IGP P LVD +TG +LL Sbjct: 4 KMVIVVRTDLDMGKGKIAAQVAHAAVSLVLDILNSSNSLWKEWLYKWLEEGQPKIVVKVPSLDELNKRYEKAIELNLPTTIIQDAGKTQIEPGTITCIGIGPAPVELVDKITGDLKLL 121
BLAST of CX078571 vs. ExPASy Swiss-Prot
Match: PTH_PYRFU (Peptidyl-tRNA hydrolase OS=Pyrococcus furiosus GN=pth PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.732e-21 Identity = 53/114 (46.49%), Postives = 71/114 (62.28%), Query Frame = -3 Query: 384 KLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 725 K V+V R DLK+ GK+A Q AH A E + R W + GQ K+VV +N++E+ KL AE GLPT ++ DAG T++ G+ TVLAIGPGP+ +VD VTG +LL Sbjct: 6 KQVIVARSDLKLSKGKLAVQVAHGAVTAAFEAYKKKREWFEAWFREGQKKVVVKAQNEEELFKLKSEAEKLGLPTALIRDAGLTEIPPGTITVLAIGPGPEEVVDKVTGHLKLL 119
BLAST of CX078571 vs. ExPASy Swiss-Prot
Match: PTH_METS5 (Peptidyl-tRNA hydrolase OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=pth PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.660e-21 Identity = 53/117 (45.30%), Postives = 74/117 (63.25%), Query Frame = -3 Query: 384 LKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQ--SDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 728 +K+V++VR D+ MG GKIA+Q AHAA + + M S R L W GQPK+VV + +++ + A + GLPT V++DAGRTQV G+ T IGPGP L+D +TG +LL Sbjct: 1 MKMVVMVRTDINMGKGKIAAQVAHAAVSLVLDCMSRSSWRDWLDSWLHEGQPKVVVKVSSLEDLLSRVDKARSQGLPTTVISDAGRTQVEPGTVTCAGIGPGPDDLIDKITGDLKLL 117
BLAST of CX078571 vs. ExPASy Swiss-Prot
Match: PTH_SULSO (Peptidyl-tRNA hydrolase OS=Sulfolobus solfataricus GN=pth PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.948e-21 Identity = 52/119 (43.70%), Postives = 76/119 (63.87%), Query Frame = -3 Query: 384 LKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSD----RHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 728 +K+V+VVR D+KMG GKIA+Q AHAA + ++ S+ + L +W GQPKI+V + E+ + AE LP ++ DAG+TQ+ G+ T L IGP P++LVDS+TG +LL Sbjct: 2 IKMVIVVRSDIKMGKGKIAAQVAHAAVTLVVSIINSNNLRWKEWLNEWLHQGQPKIIVKVNSLDEIISRAKKAETMNLPFSIIEDAGKTQLEPGTITCLGIGPAPENLVDSITGDLKLL 120
BLAST of CX078571 vs. ExPASy Swiss-Prot
Match: PTH_SULAC (Peptidyl-tRNA hydrolase OS=Sulfolobus acidocaldarius GN=pth PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.948e-21 Identity = 50/120 (41.67%), Postives = 75/120 (62.50%), Query Frame = -3 Query: 384 LKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSD-----RHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 728 +K+ ++VR DL MG GKIA+Q AHAA + E++Q + L W GQPKIV+ KN E+ + + A +GLP ++ DAG+TQ+ G+ T IGPGP+ ++D++TG +LL Sbjct: 1 MKMAVLVRTDLDMGKGKIAAQVAHAAVSLVLEIVQKRSKAEWKEWLEMWINQGQPKIVLKVKNLDELLEKYNKALQSGLPATIIQDAGKTQIEPGTITCAGIGPGPEEMIDNITGDLKLL 120 The following BLAST results are available for this feature:
BLAST of CX078571 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CX078571 ID=CX078571; Name=CX078571; organism=Citrus sinensis; type=EST; length=901bpback to top |