EY702416

Overview
NameEY702416
Unique NameEY702416
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length922
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702416 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.499e-25
Identity = 56/140 (40.00%), Postives = 80/140 (57.14%), Query Frame = 1
Query:  100 WLVTGSDSNQLGPAFLVENHPYMVNSWHFLSQCVKEGGSAIEKAFGGVYIDLTSKDQQFNKIFNEGMACNAKFLTREILAGYKHGSDSLKSLVDVAGGNGRLISEIATSYPHIKGIHFHLPHVLTTAPVYDGATNVSADM 519
            +L    D   + P  L+     ++ SW+ L   + EGG    KA+G    +    D +FNK+FN+GM+ ++K   ++IL  YK G + L SLVDV GG G ++S I + YP IKGI+F LPHV+  AP + G  NV  DM
Sbjct:  113 FLTKNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSKMAMKKILESYK-GFEGLASLVDVGGGTGAVVSTIVSKYPSIKGINFDLPHVIADAPAFPGVENVGGDM 251          
BLAST of EY702416 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.499e-25
Identity = 56/140 (40.00%), Postives = 80/140 (57.14%), Query Frame = 1
Query:  100 WLVTGSDSNQLGPAFLVENHPYMVNSWHFLSQCVKEGGSAIEKAFGGVYIDLTSKDQQFNKIFNEGMACNAKFLTREILAGYKHGSDSLKSLVDVAGGNGRLISEIATSYPHIKGIHFHLPHVLTTAPVYDGATNVSADM 519
            +L    D   + P  L+     ++ SW+ L   + EGG    KA+G    +    D +FNK+FN+GM+ ++K   ++IL  YK G + L SLVDV GG G ++S I + YP IKGI+F LPHV+  AP + G  NV  DM
Sbjct:  113 FLTRNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSVHSKMAMKKILETYK-GFEGLASLVDVGGGTGAVVSTIVSKYPSIKGINFDLPHVIADAPAFPGVENVGGDM 251          
BLAST of EY702416 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 3.111e-24
Identity = 54/140 (38.57%), Postives = 80/140 (57.14%), Query Frame = 1
Query:  100 WLVTGSDSNQLGPAFLVENHPYMVNSWHFLSQCVKEGGSAIEKAFGGVYIDLTSKDQQFNKIFNEGMACNAKFLTREILAGYKHGSDSLKSLVDVAGGNGRLISEIATSYPHIKGIHFHLPHVLTTAPVYDGATNVSADM 519
            +L    D   + P  L+     ++ SW++L   + EGG    KA+G    +    D +FNK+FN+GM+ ++    ++IL  YK G + L SLVDV GG G +++ I + YP IKGI+F LPHV+  AP Y G  +V  DM
Sbjct:  114 FLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYK-GFEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDM 252          

HSP 2 Score: 22.3274 bits (46), Expect = 3.111e-24
Identity = 12/35 (34.29%), Postives = 19/35 (54.29%), Query Frame = 3
Query:  525 NLTNADARHLKWVLH*LNH----KALCNNFSKLPD 617
            ++ NADA  +KW+ H  +     K L N +  LP+
Sbjct:  255 SVPNADAVFMKWICHDWSDAHCLKFLKNCYDALPE 289          
BLAST of EY702416 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 5.284e-24
Identity = 54/140 (38.57%), Postives = 79/140 (56.43%), Query Frame = 1
Query:  100 WLVTGSDSNQLGPAFLVENHPYMVNSWHFLSQCVKEGGSAIEKAFGGVYIDLTSKDQQFNKIFNEGMACNAKFLTREILAGYKHGSDSLKSLVDVAGGNGRLISEIATSYPHIKGIHFHLPHVLTTAPVYDGATNVSADM 519
            +LV   D   L P  L++     + SW+++   + EGG    KA G    D    D +FNKIFN  M+ ++  + ++IL  Y +G + LK++VDV GG G +++ I   YP IKGI+F LPHV+  AP Y G  +V  DM
Sbjct:   96 FLVKNEDGVSLAPLRLIDQDRVFLESWYYMKDAILEGGIPFHKAHGMTAFDYPGTDPRFNKIFNRAMSDHSTIMMKKILETY-NGFEGLKTVVDVGGGTGAILNMIVAKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDM 234          

HSP 2 Score: 22.7126 bits (47), Expect = 5.284e-24
Identity = 7/15 (46.67%), Postives = 10/15 (66.67%), Query Frame = 3
Query:  525 NLTNADARHLKWVLH 569
            N+ N DA  +KW+ H
Sbjct:  237 NIPNGDAVFMKWICH 251          
BLAST of EY702416 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.310e-23
Identity = 53/140 (37.86%), Postives = 80/140 (57.14%), Query Frame = 1
Query:  100 WLVTGSDSNQLGPAFLVENHPYMVNSWHFLSQCVKEGGSAIEKAFGGVYIDLTSKDQQFNKIFNEGMACNAKFLTREILAGYKHGSDSLKSLVDVAGGNGRLISEIATSYPHIKGIHFHLPHVLTTAPVYDGATNVSADM 519
            +L    D   + P  L+     ++ SW++L   + +GG    KA+G    +    D +FNK+FN+GM+ ++    ++IL  YK G + L SLVDV GG G +++ I + YP IKGI+F LPHV+  AP Y G  +V  DM
Sbjct:  114 FLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYK-GFEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDM 252          
BLAST of EY702416 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.017e-23
Identity = 63/182 (34.62%), Postives = 92/182 (50.55%), Query Frame = 1
Query:   85 ATRQLWLVTGSDSNQLGPAFLVENHPYMVNSWHFLSQCVKEGGSAIEKAFGGVYIDLTSKDQQFNKIFNEGMACNAKFLTREILAGYKHGSDSLKSLVDVAGGNGRLISEIATSYPHIKGIHFHLPHVLTTAPVYDGATNVSADMSPTLLMLTHAT*SGCSTN*IIRPCVIIFQNCPILLPD 630
            AT   +LV   D   +    L+     ++ SW+ L   V +GG    KA+G    +    D +FNK+FN+GM+ ++    ++IL  Y  G + LKSLVDV GG G +I+ I + YP IKGI+F LPHV+  AP Y G  +V  DM  ++             +     C+   +NC   LPD
Sbjct:  109 ATVAKYLVKNEDGVSISALNLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYT-GFEGLKSLVDVGGGTGAVINTIVSKYPTIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSIPKADAVFMKWICHDWSDEHCLKFLKNCYEALPD 289          
BLAST of EY702416 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 5.147e-23
Identity = 55/140 (39.29%), Postives = 78/140 (55.71%), Query Frame = 1
Query:  100 WLVTGSDSNQLGPAFLVENHPYMVNSWHFLSQCVKEGGSAIEKAFGGVYIDLTSKDQQFNKIFNEGMACNAKFLTREILAGYKHGSDSLKSLVDVAGGNGRLISEIATSYPHIKGIHFHLPHVLTTAPVYDGATNVSADM 519
            +L    D   +    L+     +V SW+ L   V +GG    KA+G    D    D +FNK+FN+GMA ++    ++IL  YK G + L S+VDV GG G +++ I + YP IKGI+F LPHV+  AP Y G  +V  DM
Sbjct:  114 FLTKNEDGVSIAALCLMNQDKVLVESWYHLKDAVLDGGIPFNKAYGMTAFDYHGTDPRFNKVFNKGMADHSTITMKKILETYK-GFEGLTSIVDVGGGTGAVVNMIVSKYPSIKGINFDLPHVIEDAPQYPGVQHVGGDM 252          
BLAST of EY702416 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 5.147e-23
Identity = 54/140 (38.57%), Postives = 79/140 (56.43%), Query Frame = 1
Query:  100 WLVTGSDSNQLGPAFLVENHPYMVNSWHFLSQCVKEGGSAIEKAFGGVYIDLTSKDQQFNKIFNEGMACNAKFLTREILAGYKHGSDSLKSLVDVAGGNGRLISEIATSYPHIKGIHFHLPHVLTTAPVYDGATNVSADM 519
            +L    D   + P  L+     ++ SW+ LS  V +GG    KA+G    +    D +FNK+FN+GM+ ++    ++IL  Y  G D LK++VDV GG G  ++ I + YP IKGI+F LPHV+  AP Y G  +V  DM
Sbjct:  112 FLTKNEDGVSMAPLTLMNQDKVLMESWYHLSDAVVDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYT-GFDGLKTVVDVGGGTGATLNMIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDM 250          
BLAST of EY702416 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.147e-22
Identity = 54/140 (38.57%), Postives = 78/140 (55.71%), Query Frame = 1
Query:  100 WLVTGSDSNQLGPAFLVENHPYMVNSWHFLSQCVKEGGSAIEKAFGGVYIDLTSKDQQFNKIFNEGMACNAKFLTREILAGYKHGSDSLKSLVDVAGGNGRLISEIATSYPHIKGIHFHLPHVLTTAPVYDGATNVSADM 519
            +L    +   + P  L+     ++ SW+ L   V EGG    KA+G    +    D +FNK+FN GMA ++    ++IL  YK G + L S+VDV GG G +++ I + YP IKGI+F LPHV+  AP Y G  +V  DM
Sbjct:  114 FLTKNEEGVSIAPLCLMNQDKVLLESWYHLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMADHSTITMKKILETYK-GFEGLTSVVDVGGGTGAVLNMIVSKYPSIKGINFDLPHVIEDAPQYPGVEHVGGDM 252          
BLAST of EY702416 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.498e-22
Identity = 51/140 (36.43%), Postives = 78/140 (55.71%), Query Frame = 1
Query:  100 WLVTGSDSNQLGPAFLVENHPYMVNSWHFLSQCVKEGGSAIEKAFGGVYIDLTSKDQQFNKIFNEGMACNAKFLTREILAGYKHGSDSLKSLVDVAGGNGRLISEIATSYPHIKGIHFHLPHVLTTAPVYDGATNVSADM 519
            +L    D   L P  L+     ++ SW++L   + +GG    KA+G    +    D +FNK+FN GM+ ++    ++I   Y  G ++L ++VDV GG G ++S I   YP IKGI+F LPHV+  AP+Y G  +V  DM
Sbjct:  119 FLTKNEDGVSLAPLCLMNQDKVLMESWYYLKDAILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTITMKKIFEMYT-GFEALNTIVDVGGGTGAVLSMIVAKYPSIKGINFDLPHVIEDAPIYPGVEHVGGDM 257          
The following BLAST results are available for this feature:
BLAST of EY702416 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
COMT3_POPKI5.499e-2540.00Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
COMT2_POPTM5.499e-2540.00Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
COMT1_POPKI3.111e-2438.57Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT1_EUCGL5.284e-2438.57Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]
COMT1_POPTM2.310e-2337.86Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT1_MEDSA3.017e-2334.62Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_ROSCH5.147e-2339.29Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
COMT1_OCIBA5.147e-2338.57Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
COMT1_PRUDU1.147e-2238.57Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_CLABR1.498e-2236.43Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-006-G02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702416 ID=EY702416; Name=EY702416; organism=Citrus sinensis; type=EST; length=922bp
GGGGGGGGGGGNGGNNNNCTTAAATTTNNCNAANNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNTTCTCGACCCACGCGTCCGCCACTCGTCAATTAT
GGCTTGTCACTGGCTCTGATTCAAACCAGTTGGGACCCGCTTTCTTAGTG
GAGAACCATCCATACATGGTCAACTCTTGGCATTTCCTGAGCCAATGTGT
CAAAGAAGGCGGTAGTGCAATTGAAAAGGCTTTTGGCGGGGTATATATCG
ATTTAACATCCAAAGATCAACAGTTCAACAAAATCTTCAATGAGGGCATG
GCTTGTAATGCCAAGTTCTTAACTAGGGAAATATTAGCAGGTTATAAACA
TGGGTCTGATTCATTGAAATCATTGGTCGATGTGGCAGGCGGGAATGGAC
GCTTGATATCTGAGATAGCGACATCATATCCACACATCAAAGGCATCCAC
TTTCATTTACCACATGTCCTCACCACAGCACCGGTCTATGATGGCGCCAC
AAATGTTTCGGCCGACATGTCCCCAACCTTACTAATGCTGACGCACGCCA
CTTGAAGTGGGTGCTCCACTAACTAAATCATAAGGCCTTGTGTAATAATT
TTTCAAAACTGCCCGATACTACTACCGGATAAACTTGGAATATGATAAAA
ATTAATATCAAATAACCACCTAAAGCCACAACGCTGATTCTAAACACATC
GAATCCTGGAAATAAATCTCTTTGGCTTTACCGTGGGGGCGGGAAATAAA
CAACAAATCCTCGCTCCTACAACTTTCTCACCCACGGGCCTTCCCCCCCT
CCGCCAGCCCCACATTCCTCCTCTTCTCCCTTCCTCCTCGCCACTCCAAA
ATCACTAGAAGATCTTTTGGTCCGGCTCATCATATCCCCCCCCGGACCAC
TTTGTCCCTCCCCCACTCGGGC
back to top