CX078123
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX078123 vs. ExPASy Swiss-Prot
Match: CPL4_ARATH (RNA polymerase II C-terminal domain phosphatase-like 4 OS=Arabidopsis thaliana GN=CPL4 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.175e-20 Identity = 32/58 (55.17%), Postives = 42/58 (72.41%), Query Frame = 2 Query: 347 QREVLKGCKLVFSHAFPSKFPAHIHYLWKVVEQLGATCSIELDPSVTHVVSNKCSNEK 520 ++E+LKGCK+VFS FP+K H LWK+ E+LGATC+ E+D SVTHVV+ EK Sbjct: 338 RKEILKGCKIVFSRVFPTKAKPEDHPLWKMAEELGATCATEVDASVTHVVAMDVGTEK 395 HSP 2 Score: 47.3654 bits (111), Expect = 3.175e-20 Identity = 20/43 (46.51%), Postives = 29/43 (67.44%), Query Frame = 3 Query: 513 TKKSHWAAKEAKFLVDPRWIEAANCLWQGQLEEKFPVKQTKPE 641 T+K+ WA +E K++V WI+AAN LW Q EE F ++Q K + Sbjct: 393 TEKARWAVREKKYVVHRGWIDAANYLWMKQPEENFGLEQLKKQ 435
BLAST of CX078123 vs. ExPASy Swiss-Prot
Match: CPL3_ARATH (RNA polymerase II C-terminal domain phosphatase-like 3 OS=Arabidopsis thaliana GN=CPL3 PE=1 SV=2) HSP 1 Score: 62.7734 bits (151), Expect = 7.795e-13 Identity = 27/61 (44.26%), Postives = 40/61 (65.57%), Query Frame = 2 Query: 347 QREVLKGCKLVFSHAFP-SKFPAHIHYLWKVVEQLGATCSIELDPSVTHVVSNKCSNEKVS 526 QR++L GC++VFS P + H+H LW+ EQ GA C+ ++D VTHVV+N +KV+ Sbjct: 1147 QRKILAGCRIVFSRIIPVGEAKPHLHPLWQTAEQFGAVCTTQVDEHVTHVVTNSLGTDKVN 1207 HSP 2 Score: 31.9574 bits (71), Expect = 7.795e-13 Identity = 13/37 (35.14%), Postives = 21/37 (56.76%), Query Frame = 3 Query: 513 TKKSHWAAKEAKFLVDPRWIEAANCLWQGQLEEKFPV 623 T K +WA +F+V P W+EA+ L+Q E + + Sbjct: 1203 TDKVNWALTRGRFVVHPGWVEASAFLYQRANENLYAI 1239 The following BLAST results are available for this feature:
BLAST of CX078123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX078123 ID=CX078123; Name=CX078123; organism=Citrus sinensis; type=EST; length=825bpback to top |