CX078110

Overview
NameCX078110
Unique NameCX078110
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3510 contig Csv1_Contig3510:555..1363. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA1_UROPA (Phosphoenolpyruvate carboxykinase [ATP] 1 OS=Urochloa panicoides GN=PCK1 PE=1 SV=1)

HSP 1 Score: 400.979 bits (1029), Expect = 4.101e-111
Identity = 189/215 (87.91%), Postives = 201/215 (93.49%), Query Frame = -1
Query:  165 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGPNF 809
            AYPIE+IPNAKIPCVGPHPKNVILLACDA+GVLPPVSKLNLAQTMYHFISGYTA+VAGTEDG+KEPTATFSACFGAAFIM HPTKYAAMLAEKMQK+G TGWLVNTGWSGG YG G+RIKLPYTRKIIDAIHSG LL ANYKKT+VFG+EIPTE+ GVPSEILDP NTW DK AYKETLLKLAGLFK NFE+F +YKIG DN LTE+ILAAGPNF
Sbjct:  410 AYPIEFIPNAKIPCVGPHPKNVILLACDAYGVLPPVSKLNLAQTMYHFISGYTAIVAGTEDGVKEPTATFSACFGAAFIMYHPTKYAAMLAEKMQKYGRTGWLVNTGWSGGRYGVGNRIKLPYTRKIIDAIHSGELLTANYKKTEVFGLEIPTEINGVPSEILDPVNTWTDKAAYKETLLKLAGLFKNNFEVFASYKIGDDNSLTEQILAAGPNF 624          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA2_UROPA (Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Urochloa panicoides GN=PCK2 PE=2 SV=1)

HSP 1 Score: 394.43 bits (1012), Expect = 3.839e-109
Identity = 186/215 (86.51%), Postives = 200/215 (93.02%), Query Frame = -1
Query:  165 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGPNF 809
            AYPIE+IPNAKIPCVGPHPKNVILLACDA+GVLPPVSKLNLAQTMYHFISGYTA+VAGTEDG+KEPTATFSACFGAAFIM HPTKYAAMLAEKMQK+GATGWLVNTGWSGG YG G+RIKLPYTRKIIDAIHSG LLNA+YKKT+VFG+EIPT + GVPSEIL P NTW DK AYKETLLKLAGLFK NFE+F +YKIG +N LTE+ILAA PNF
Sbjct:  412 AYPIEFIPNAKIPCVGPHPKNVILLACDAYGVLPPVSKLNLAQTMYHFISGYTAIVAGTEDGVKEPTATFSACFGAAFIMYHPTKYAAMLAEKMQKYGATGWLVNTGWSGGRYGVGNRIKLPYTRKIIDAIHSGELLNASYKKTEVFGLEIPTAINGVPSEILGPVNTWTDKAAYKETLLKLAGLFKNNFEVFASYKIGNNNSLTEQILAAAPNF 626          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_ARATH (Phosphoenolpyruvate carboxykinase [ATP] OS=Arabidopsis thaliana GN=PCKA PE=1 SV=1)

HSP 1 Score: 392.889 bits (1008), Expect = 1.117e-108
Identity = 186/215 (86.51%), Postives = 202/215 (93.95%), Query Frame = -1
Query:  165 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGPNF 809
            AYPIE+IPNAKIPCVGPHP NVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKM+  GATGWLVNTGWSGGSYG G+RIKL YTRKIIDAIHSGSLL ANYKKT++FG EIPTE+EG+PSEILDP N+W+DK+A+K+TL+KL GLFK+NFE+F N+KIG D KLTEEILAAGP F
Sbjct:  457 AYPIEFIPNAKIPCVGPHPTNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMKSQGATGWLVNTGWSGGSYGVGNRIKLAYTRKIIDAIHSGSLLKANYKKTEIFGFEIPTEIEGIPSEILDPVNSWSDKKAHKDTLVKLGGLFKKNFEVFANHKIGVDGKLTEEILAAGPIF 671          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_MAIZE (Phosphoenolpyruvate carboxykinase [ATP] OS=Zea mays PE=2 SV=1)

HSP 1 Score: 386.341 bits (991), Expect = 1.045e-106
Identity = 185/215 (86.05%), Postives = 196/215 (91.16%), Query Frame = -1
Query:  165 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGPNF 809
            AYPIEYIP AKIPCVGPHPKNVILLACDAFGVLPPVSKL LAQTMYHFISGYTALVAGTEDGIKEP ATFSACFGAAFIMLHPTKYAAMLAEKMQK+GATGWLVNTGWSGG YG G RI+LPYTRKIIDAIHSG LL ANY+KT+VFG+EIPTE+ GVPSEILDP  TW DK AYKE LL+L GLFK NFE+F +YKIG D+ LT+EILAAGPNF
Sbjct:  452 AYPIEYIPIAKIPCVGPHPKNVILLACDAFGVLPPVSKLILAQTMYHFISGYTALVAGTEDGIKEPQATFSACFGAAFIMLHPTKYAAMLAEKMQKYGATGWLVNTGWSGGRYGVGKRIRLPYTRKIIDAIHSGELLTANYQKTEVFGLEIPTEINGVPSEILDPIYTWTDKAAYKENLLRLGGLFKNNFEVFASYKIGDDSSLTDEILAAGPNF 666          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_CUCSA (Phosphoenolpyruvate carboxykinase [ATP] OS=Cucumis sativus GN=PCK PE=2 SV=1)

HSP 1 Score: 367.466 bits (942), Expect = 5.025e-101
Identity = 174/213 (81.69%), Postives = 192/213 (90.14%), Query Frame = -1
Query:  171 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 809
            AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKL+L QTMYHFISGYTALVAGTE+G+KEP ATFSACFGAAFIMLHP++YAAMLAEKM+KHGATGWLVNTGWSGGSYG G+RIKL YTRKIIDAIHSG+LL ANY KT VFG+EIP  +EGVPS ILDP NTW+DK  Y ETLLKL GLFK+N+E    Y++ +D++L EEILAAGP
Sbjct:  456 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLSLPQTMYHFISGYTALVAGTEEGVKEPQATFSACFGAAFIMLHPSRYAAMLAEKMKKHGATGWLVNTGWSGGSYGSGNRIKLAYTRKIIDAIHSGALLEANYSKTRVFGLEIPDAIEGVPSHILDPINTWSDKDGYHETLLKLGGLFKKNYEGIHTYQVERDSELAEEILAAGP 668          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_DICDI (Phosphoenolpyruvate carboxykinase [ATP] OS=Dictyostelium discoideum GN=pckA PE=1 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 3.177e-71
Identity = 129/213 (60.56%), Postives = 155/213 (72.77%), Query Frame = -1
Query:  171 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 809
            AYP+E+IPNAK P +  HPKN+I+L CDAFG+LPPVS+L+  Q MYHFI GYTA VAGTE G+ EPTATFS+C+G  FI+ HPTKYA MLA ++ KH A  WL+NTGW+GGS+G GSRIKL YTR IIDAIHSG L      K DVFG ++P    GVPSEIL P N WADK+ Y  T+ KLA LF  NF+ F        +K + E++AAGP
Sbjct:  353 AYPLEHIPNAKFPAIAGHPKNIIMLTCDAFGILPPVSRLDANQVMYHFIQGYTAKVAGTEVGVTEPTATFSSCYGEPFIVWHPTKYAEMLASQLHKHSARAWLINTGWTGGSHGVGSRIKLAYTRAIIDAIHSGELEKIPTTKMDVFGFQVPNSCPGVPSEILMPINGWADKEKYVSTMHKLAKLFIENFKKF-------QDKASPELVAAGP 558          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_CANGA (Phosphoenolpyruvate carboxykinase [ATP] OS=Candida glabrata GN=PCK1 PE=3 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 4.019e-66
Identity = 121/216 (56.02%), Postives = 154/216 (71.30%), Query Frame = -1
Query:  171 AYPIEYIPNAKIPCVGP-HPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSY-GCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQA-YKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 809
            AYPI++IP+AKIPC+ P HPKN+ILL CDA GVLPPVSKL   Q MYHFISGYT+ +AGTE G+ EP  TFS+CFG  F+ LHP +YA MLAEKM +H A  WL+NTGW+G SY   G R  L YTR I+DAIH GSL  A ++   +F +++P  VEGVPSE+L+P   W++ +A Y+  + KLAGLF  NF+ +        +K T ++LAAGP
Sbjct:  334 AYPIDFIPSAKIPCLAPAHPKNIILLTCDASGVLPPVSKLTPEQVMYHFISGYTSKMAGTEQGVTEPEPTFSSCFGQPFLSLHPMRYATMLAEKMHEHSANAWLINTGWTGSSYVSGGKRCALKYTRAILDAIHDGSLAKAEFESLPIFNLQVPKAVEGVPSELLNPARNWSEGEAKYQSAVSKLAGLFVENFKTY-------QDKATSDVLAAGP 542          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_NEUCR (Phosphoenolpyruvate carboxykinase [ATP] OS=Neurospora crassa GN=pck-1 PE=3 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 2.205e-64
Identity = 119/216 (55.09%), Postives = 153/216 (70.83%), Query Frame = -1
Query:  171 AYPIEYIPNAKIPCVGP-HPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYG-CGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTW-ADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 809
            AYPIEYIPNAKIPC+ P HPKN+ILL CDA GVLPP+SKL+ AQTM+HFISGYT+ +AGTEDGI EP ATFS+CF   F+ LHP +YA MLAEK++ H A  WL+NTGW G  +   G R  L YTR I+DAIHSG L N  Y+  +VF +++P    GVPSE+L+P+  W A   ++   + KL GLF  NF+ +       +++ TE+++ AGP
Sbjct:  351 AYPIEYIPNAKIPCLSPNHPKNIILLTCDARGVLPPISKLDSAQTMFHFISGYTSKMAGTEDGILEPQATFSSCFAQPFLALHPMRYAKMLAEKIENHNANAWLLNTGWVGAGFAQGGKRCPLKYTRAILDAIHSGELANVEYENYEVFNLQVPKSCPGVPSELLNPKTAWTAGANSFDTEVKKLGGLFLENFKKY-------ESEATEDVIKAGP 559          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_ASHGO (Phosphoenolpyruvate carboxykinase [ATP] OS=Ashbya gossypii GN=PCK1 PE=3 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 5.432e-63
Identity = 117/216 (54.17%), Postives = 149/216 (68.98%), Query Frame = -1
Query:  171 AYPIEYIPNAKIPCVGP-HPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGC-GSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQA-YKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 809
            AYPIEYIP+A+IPC+   HP N++LL CDA GVLPPVS+L   Q MYHFISGYT+ +AGTE G+ EP ATFS+CFG  F+ LHP KYA MLAEKM +H A+ WL+NTGW+G SY   G R  L YTR I+D+IH G+L  A Y+   VFG+ IP  VEGVP+E+L+P   W + +  Y   +  LA  F  NF+I+        ++ TEE++ AGP
Sbjct:  331 AYPIEYIPSAQIPCLSENHPSNIVLLTCDASGVLPPVSRLTPEQVMYHFISGYTSKMAGTEQGVTEPEATFSSCFGQPFLALHPMKYATMLAEKMSQHNASAWLINTGWTGSSYTAGGKRCPLKYTRAILDSIHDGTLAQAEYETLPVFGLSIPKAVEGVPAELLNPAKNWVEGEGKYASAVSALASKFTENFKIY-------QDQATEEVVRAGP 539          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_YEAST (Phosphoenolpyruvate carboxykinase [ATP] OS=Saccharomyces cerevisiae GN=PCK1 PE=1 SV=2)

HSP 1 Score: 240.736 bits (613), Expect = 7.094e-63
Identity = 116/218 (53.21%), Postives = 153/218 (70.18%), Query Frame = -1
Query:  165 AYPIEYIPNAKIPCVGP-HPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSY-GCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQA-YKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGPNF 809
            AYPI+YIP+AKIPC+   HPKN+ILL CDA GVLPPVSKL   Q MYHFISGYT+ +AGTE G+ EP  TFS+CFG  F+ LHP +YA MLA KM +H A  +L+NTGW+G SY   G R  L YTR I+D+IH GSL N  Y+   +F +++PT+V GVP+E+L+P   W+  ++ Y+  +  LA LF +NF+I+        ++ T ++LAAGP F
Sbjct:  338 AYPIDYIPSAKIPCLADSHPKNIILLTCDASGVLPPVSKLTPEQVMYHFISGYTSKMAGTEQGVTEPEPTFSSCFGQPFLALHPIRYATMLATKMSQHKANAYLINTGWTGSSYVSGGKRCPLKYTRAILDSIHDGSLANETYETLPIFNLQVPTKVNGVPAELLNPAKNWSQGESKYRGAVTNLANLFVQNFKIY-------QDRATPDVLAAGPQF 548          
The following BLAST results are available for this feature:
BLAST of CX078110 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA1_UROPA4.101e-11187.91Phosphoenolpyruvate carboxykinase [ATP] 1 OS=Uroch... [more]
PCKA2_UROPA3.839e-10986.51Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Uroch... [more]
PCKA_ARATH1.117e-10886.51Phosphoenolpyruvate carboxykinase [ATP] OS=Arabido... [more]
PCKA_MAIZE1.045e-10686.05Phosphoenolpyruvate carboxykinase [ATP] OS=Zea may... [more]
PCKA_CUCSA5.025e-10181.69Phosphoenolpyruvate carboxykinase [ATP] OS=Cucumis... [more]
PCKA_DICDI3.177e-7160.56Phosphoenolpyruvate carboxykinase [ATP] OS=Dictyos... [more]
PCKA_CANGA4.019e-6656.02Phosphoenolpyruvate carboxykinase [ATP] OS=Candida... [more]
PCKA_NEUCR2.205e-6455.09Phosphoenolpyruvate carboxykinase [ATP] OS=Neurosp... [more]
PCKA_ASHGO5.432e-6354.17Phosphoenolpyruvate carboxykinase [ATP] OS=Ashbya ... [more]
PCKA_YEAST7.094e-6353.21Phosphoenolpyruvate carboxykinase [ATP] OS=Sacchar... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_7A07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-7A07-B13-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078110 ID=CX078110; Name=CX078110; organism=Citrus sinensis; type=EST; length=809bp
TTTTTTTTTTGACTCAAATATCGGATTACTTAATTAATTCAGAGAACAAG
TTTACATATGAATCGAACCACACATGTCGAATATGACTATATTACGCTTT
ATTTCCATCATATTTCCCAAACCACACTCACGTTCTTTGCTTGTTCTTCA
CTCGGTCTAAATTAGAAATTTGGACCAGCTGCAAGGATCTCTTCAGTGAG
CTTGTTGTCCTTGCCAATCTTGTAGTTTGTGAATATTTCAAAGTTCCTCT
TGAAAAGACCAGCCAGCTTCAGCAGTGTCTCCTTGTAAGCCTGCTTGTCT
GCCCAAGTGTTCTCTGGATCCAGGATTTCTGAAGGCACTCCCTCGACTTC
AGTGGGGATTTCCACCCCAAATACATCAGTTTTCTTGTAATTTGCATTCA
ACAGGCTGCCAGAGTGTATCGCATCAATGATTTTTCGAGTGTACGGTAAC
TTGATGCGGCTGCCACAACCATAGCTTCCACCTGACCATCCAGTGTTGAC
GAGCCATCCTGTAGCACCATGCTTCTGCATCTTCTCAGCCAGCATTGCTG
CATACTTGGTAGGATGCAGCATGATAAATGCTGCACCAAAGCAAGCTGAA
AATGTTGCCGTTGGCTCCTTAATACCATCCTCTGTTCCAGCTACCAAAGC
AGTGTAGCCACTGATGAAATGGTACATTGTTTGTGCCAGGTTCAGCTTGC
TCACTGGTGGGAGTACACCAAAAGCATCACATGCCAAAAGGATGACATTC
TTGGGATGAGGACCAACGCATGGTATCTTTGCATTGGGGATATACTCAAT
GGGGTAGGC
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