CX078104

Overview
NameCX078104
Unique NameCX078104
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length773
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5276 contig Csv1_Contig5276:215..987. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX078104 vs. ExPASy Swiss-Prot
Match: TIAR_HUMAN (Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.606e-45
Identity = 95/230 (41.30%), Postives = 144/230 (62.61%), Query Frame = 3
Query:   84 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDFKSVVELTNGTSEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 764
            R++YVGN+   VT  L+ ++FS  GP + CK+I +  S+  Y FV++++ R AA A+  +NGR I G+ +KVNWA   SSQ++DTS HF+VFVGDLSPE+T   + + F+ F   SDARV+ D  TG+S+G+GFVSF N+ DA++AI  + G+WLG RQIR NWA +   +    Q ++ K             Q +  +   +++P+  TVY G ++S +T   + + F
Sbjct:    9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTK-------------QLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTF 225          

HSP 2 Score: 73.1738 bits (178), Expect = 1.806e-12
Identity = 50/205 (24.39%), Postives = 89/205 (43.41%), Query Frame = 3
Query:   69 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYA------SSQREDTSG-------------HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDF 614
            D S    V+VG++ P++T   ++  F+  G +   +++K         YGFV ++++  A  AIV + G+ + G+ I+ NWA        S+Q  +T               +  V+ G ++  +TD  +   FS F    + RV  +      +G+ FV F   E A  AI  +NG  +    ++C W  +        Q  D+
Sbjct:   92 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDY 290          
BLAST of CX078104 vs. ExPASy Swiss-Prot
Match: TIAR_MOUSE (Nucleolysin TIAR OS=Mus musculus GN=Tial1 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.375e-43
Identity = 95/247 (38.46%), Postives = 143/247 (57.89%), Query Frame = 3
Query:   84 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-------------------YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDFKSVVELTNGTSEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 764
            R++YVGN+   VT  L+ ++FS  GP + CK+I +   S                   Y FV++++ R AA A+  +NGR I G+ +KVNWA   SSQ++DTS HF+VFVGDLSPE+T   + + F+ F   SDARV+ D  TG+S+G+GFVSF N+ DA++AI  + G+WLG RQIR NWA +   +    Q ++ K             Q +  +   +++P+  TVY G ++S +T   + + F
Sbjct:    9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQETNTK-------------QLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTF 242          

HSP 2 Score: 72.7886 bits (177), Expect = 2.359e-12
Identity = 50/205 (24.39%), Postives = 89/205 (43.41%), Query Frame = 3
Query:   69 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYA------SSQREDTSG-------------HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDF 614
            D S    V+VG++ P++T   ++  F+  G +   +++K         YGFV ++++  A  AIV + G+ + G+ I+ NWA        S+Q  +T               +  V+ G ++  +TD  +   FS F    + RV  +      +G+ FV F   E A  AI  +NG  +    ++C W  +        Q  D+
Sbjct:  109 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDY 307          
BLAST of CX078104 vs. ExPASy Swiss-Prot
Match: TIA1_MOUSE (Nucleolysin TIA-1 OS=Mus musculus GN=Tia1 PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 6.365e-42
Identity = 96/241 (39.83%), Postives = 140/241 (58.09%), Query Frame = 3
Query:   84 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYA-SSQREDTSG-----------HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDFKSVVELTNGTSEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 764
            +++YVGN+   VT AL+ ++FS  GP + CK+I     +  Y FV++ + R AA A+  +NGR I G+ +KVNWA   SSQ++DTS            HF+VFVGDLSPE+T   + A F+ F   SDARV+ D  TG+S+G+GFVSF N+ DA++AI  + G+WLG RQIR NWA +   +      S+ K             Q   +E   +++P   TVY G ++S +T   + + F
Sbjct:    7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTK-------------QLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTF 234          

HSP 2 Score: 70.0922 bits (170), Expect = 1.529e-11
Identity = 45/182 (24.73%), Postives = 84/182 (46.15%), Query Frame = 3
Query:   90 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWA----------YASSQRE---------DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNW 566
            V+VG++ P++T   ++  F+  G +   +++K         YGFV +F++  A  AI  + G+ + G+ I+ NWA          Y S+ ++          +  +  V+ G ++  +T+  +   FS F    + RV  D      +G+ FV F + E A  AI  +NG  +    ++C W
Sbjct:  108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYW 283          
BLAST of CX078104 vs. ExPASy Swiss-Prot
Match: TIA1_HUMAN (Nucleolysin TIA-1 isoform p40 OS=Homo sapiens GN=TIA1 PE=1 SV=3)

HSP 1 Score: 170.629 bits (431), Expect = 8.313e-42
Identity = 96/241 (39.83%), Postives = 140/241 (58.09%), Query Frame = 3
Query:   84 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYA-SSQREDTSG-----------HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDFKSVVELTNGTSEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 764
            +++YVGN+   VT AL+ ++FS  GP + CK+I     +  Y FV++ + R AA A+  +NGR I G+ +KVNWA   SSQ++DTS            HF+VFVGDLSPE+T   + A F+ F   SDARV+ D  TG+S+G+GFVSF N+ DA++AI  + G+WLG RQIR NWA +   +      S+ K             Q   +E   +++P   TVY G ++S +T   + + F
Sbjct:    7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTK-------------QLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTF 234          

HSP 2 Score: 70.4774 bits (171), Expect = 1.171e-11
Identity = 44/182 (24.18%), Postives = 81/182 (44.51%), Query Frame = 3
Query:   90 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWA-------------------YASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNW 566
            V+VG++ P++T   ++  F+  G +   +++K         YGFV +F++  A  AI  + G+ + G+ I+ NWA                   Y     + +  +  V+ G ++  +T+  +   FS F    + RV  D      +G+ FV F + E A  AI  +NG  +    ++C W
Sbjct:  108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYW 283          
BLAST of CX078104 vs. ExPASy Swiss-Prot
Match: PUB1_YEAST (Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1 OS=Saccharomyces cerevisiae GN=PUB1 PE=1 SV=3)

HSP 1 Score: 142.124 bits (357), Expect = 3.166e-33
Identity = 72/167 (43.11%), Postives = 106/167 (63.47%), Query Frame = 3
Query:   84 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI--KKDKS-SYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 575
            R +YVGN+   +T  +L++ F   GP+   K++  K +K+ +Y FV+Y     A +A+ TLNG+ I    +K+NWA+  SQ+  +   FN+FVGDL+  V D TL   F  FP+     VMWD +TG SRG+GFVSF +Q+DAQ+A++ + G+ L  R +R NWAAK
Sbjct:   75 RVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKINWAF-QSQQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAK 240          
BLAST of CX078104 vs. ExPASy Swiss-Prot
Match: SF3B4_RAT (Splicing factor 3B subunit 4 OS=Rattus norvegicus GN=Sf3b4 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.248e-21
Identity = 62/204 (30.39%), Postives = 106/204 (51.96%), Query Frame = 3
Query:   87 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA-RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDFKSVVELTNGTSEDGQEKSNEDAP 683
            +VYVG +  +V+  LL E+F   GP+    + K         YGFV++     A  AI  +N   ++G+PI+VN A A ++  D     N+F+G+L PE+ +  L+  FS F       ++M D  TG S+G+ F++F + + + +AI  +NG++L NR I  ++A K  + G+   S+  + +      +  D   +   DAP
Sbjct:   14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGA--NIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLSQADRPHQLFADAP 215          
BLAST of CX078104 vs. ExPASy Swiss-Prot
Match: SF3B4_MOUSE (Splicing factor 3B subunit 4 OS=Mus musculus GN=Sf3b4 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.248e-21
Identity = 62/204 (30.39%), Postives = 106/204 (51.96%), Query Frame = 3
Query:   87 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA-RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDFKSVVELTNGTSEDGQEKSNEDAP 683
            +VYVG +  +V+  LL E+F   GP+    + K         YGFV++     A  AI  +N   ++G+PI+VN A A ++  D     N+F+G+L PE+ +  L+  FS F       ++M D  TG S+G+ F++F + + + +AI  +NG++L NR I  ++A K  + G+   S+  + +      +  D   +   DAP
Sbjct:   14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGA--NIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLSQADRPHQLFADAP 215          
BLAST of CX078104 vs. ExPASy Swiss-Prot
Match: SF3B4_HUMAN (Splicing factor 3B subunit 4 OS=Homo sapiens GN=SF3B4 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.248e-21
Identity = 62/204 (30.39%), Postives = 106/204 (51.96%), Query Frame = 3
Query:   87 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA-RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDFKSVVELTNGTSEDGQEKSNEDAP 683
            +VYVG +  +V+  LL E+F   GP+    + K         YGFV++     A  AI  +N   ++G+PI+VN A A ++  D     N+F+G+L PE+ +  L+  FS F       ++M D  TG S+G+ F++F + + + +AI  +NG++L NR I  ++A K  + G+   S+  + +      +  D   +   DAP
Sbjct:   14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGA--NIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLSQADRPHQLFADAP 215          
BLAST of CX078104 vs. ExPASy Swiss-Prot
Match: NAM8_YEAST (Protein NAM8 OS=Saccharomyces cerevisiae GN=NAM8 PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 8.089e-21
Identity = 85/289 (29.41%), Postives = 137/289 (47.40%), Query Frame = 3
Query:   48 GNLPPRFDASTCRSVYVG------NIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQP---IKVNWAYASSQREDTS-------GHFNVFVGDLSPEVTDATLFACF-SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQ---SSDF------------------KSVVELTNGTSEDGQEKSN--------EDAPENN----PQYTTVYVGNLSSEVTSVDLHRHF 764
            G+L P +D +T R ++        N+     N L     SS GP        K+   Y FVD+     AA A++  NG  I   P   +K+NWA +S    + S        + ++FVGDL+P VT++ LF  F + + + S A+++ DQ TG S+G+GFV F N ++ Q A++++ G +L  R I+      G TSG ++    ++D+                  K    L+NG +  G ++++        +  P  N    P  TTV++G LSS VT  +L  +F
Sbjct:   59 GDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGP--------KNNQGYCFVDFPSSTHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRAIKV-----GPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNNMGFKRNHMSQFIYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYF 333          
BLAST of CX078104 vs. ExPASy Swiss-Prot
Match: SF3B4_CAEEL (Splicing factor 3B subunit 4 OS=Caenorhabditis elegans GN=sap-49 PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.380e-20
Identity = 62/224 (27.68%), Postives = 113/224 (50.45%), Query Frame = 3
Query:   87 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA-RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDFKSVVELTNGTSEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTS 743
            ++YVG +  +V+ ++L E+    GP+    + K     +   +GFV++     A  AI  LN   ++G+PIKVN A A  +  D     N+FVG+L PEV +  L+  FS F       ++M D  +G S+GF F++F + E + +A+  +NG++L NR I  ++A K  + G+   ++  + +        +D   +   D P   P  T + +  + + + +
Sbjct:   14 TIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILNMIKLYGKPIKVNKASAHEKNMDVGA--NIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFKRDSKGERHGTAAERMLAAQNPLFPKDRPHQVFSDVPLGVPANTPLAMPGVHAAIAA 235          
The following BLAST results are available for this feature:
BLAST of CX078104 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 123
Match NameE-valueIdentityDescription
TIAR_HUMAN3.606e-4541.30Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 PE=1 SV=... [more]
TIAR_MOUSE3.375e-4338.46Nucleolysin TIAR OS=Mus musculus GN=Tial1 PE=2 SV=... [more]
TIA1_MOUSE6.365e-4239.83Nucleolysin TIA-1 OS=Mus musculus GN=Tia1 PE=1 SV=... [more]
TIA1_HUMAN8.313e-4239.83Nucleolysin TIA-1 isoform p40 OS=Homo sapiens GN=T... [more]
PUB1_YEAST3.166e-3343.11Nuclear and cytoplasmic polyadenylated RNA-binding... [more]
SF3B4_RAT1.248e-2130.39Splicing factor 3B subunit 4 OS=Rattus norvegicus ... [more]
SF3B4_MOUSE1.248e-2130.39Splicing factor 3B subunit 4 OS=Mus musculus GN=Sf... [more]
SF3B4_HUMAN1.248e-2130.39Splicing factor 3B subunit 4 OS=Homo sapiens GN=SF... [more]
NAM8_YEAST8.089e-2129.41Protein NAM8 OS=Saccharomyces cerevisiae GN=NAM8 P... [more]
SF3B4_CAEEL1.380e-2027.68Splicing factor 3B subunit 4 OS=Caenorhabditis ele... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_7A04_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-7A04-B7-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078104 ID=CX078104; Name=CX078104; organism=Citrus sinensis; type=EST; length=773bp
ACCATCCCAGTCTCTTAGCTGCTCCTCAGATAGAGCCTATCTTGAGTGGA
AATCTGCCTCCGCGATTTGATGCAAGTACATGCCGCAGCGTGTATGTTGG
AAACATTCATCCTCAGGTTACAAATGCCCTGCTTCAAGAGGTTTTTTCAA
GTACCGGTCCCCTTGAAGGATGCAAGCTCATTAAAAAAGATAAGTCATCC
TATGGCTTTGTGGACTACTTTGATCGCAGATCAGCTGCCCTTGCAATTGT
GACTCTTAATGGAAGGCACATATTTGGACAACCTATTAAAGTAAACTGGG
CTTATGCTAGCAGCCAGAGAGAGGACACATCAGGTCATTTCAACGTTTTT
GTTGGTGATCTTAGCCCTGAAGTAACAGATGCTACTTTGTTTGCGTGCTT
CTCTGTGTTTCCTACTTGTTCGGATGCAAGGGTTATGTGGGACCAAAAGA
CTGGGCGTTCAAGGGGTTTTGGGTTTGTTTCTTTTCGGAATCAGGAGGAT
GCCCAAAGTGCAATAAATGACTTAAATGGGAAGTGGCTTGGTAATAGACA
GATTCGGTGCAACTGGGCTGCAAAAGGTGCTACCTCTGGTGATGAAAAGC
AAAGTTCAGATTTCAAAAGTGTTGTAGAGCTTACAAATGGAACATCTGAA
GATGGTCAAGAGAAGAGCAATGAGGACGCTCCGGAGAACAATCCTCAGTA
TACAACTGTTTATGTTGGCAATCTTTCTTCAGAGGTTACCTCAGTTGATC
TCCACCGACATTTTCATGCTCTT
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