CX078096

Overview
NameCX078096
Unique NameCX078096
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length773
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX078096_ssr376 microsatellite CX078096_ssr376:376..387. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CX078096 vs. ExPASy Swiss-Prot
Match: MPCP_CHOFU (Phosphate carrier protein, mitochondrial OS=Choristoneura fumiferana PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.963e-31
Identity = 69/110 (62.73%), Postives = 83/110 (75.45%), Query Frame = 3
Query:    3 MMKFASFETIVEMIYKHAVPTPKDQCSKPLQLGISFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFV 332
            MMKFA FE  VE++YKH VP P+ +CSK  QL ++FA GY+AGVFCAIVSHPAD +VS LN  K ATVG  V KLG  G++ +GL  RI+MIGTLT  QW IYDA KV++
Sbjct:  217 MMKFACFEKTVELLYKHVVPKPRAECSKGEQLVVTFAAGYIAGVFCAIVSHPADTVVSKLNQDKTATVGSIVGKLGFAGVW-KGLGPRIIMIGTLTALQWFIYDAVKVWL 325          
BLAST of CX078096 vs. ExPASy Swiss-Prot
Match: MPCP_BOVIN (Phosphate carrier protein, mitochondrial OS=Bos taurus GN=SLC25A3 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.921e-30
Identity = 64/112 (57.14%), Postives = 83/112 (74.11%), Query Frame = 3
Query:    3 MMKFASFETIVEMIYKHAVPTPKDQCSKPLQLGISFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGL 338
            MMKFA FE  VE +YK  VP P+ +CSKP QL ++F  GY+AGVFCAIVSHPAD++VS LN  KG++  + +K+LG  G++ +GL  RI+MIGTLT  QW IYD+ KV+  L
Sbjct:  232 MMKFACFERTVEALYKFVVPKPRSECSKPEQLVVTFVAGYIAGVFCAIVSHPADSVVSVLNKEKGSSASEVLKRLGFRGVW-KGLFARIIMIGTLTALQWFIYDSVKVYFRL 342          
BLAST of CX078096 vs. ExPASy Swiss-Prot
Match: MPCP_PONAB (Phosphate carrier protein, mitochondrial OS=Pongo abelii GN=SLC25A3 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 9.533e-30
Identity = 64/112 (57.14%), Postives = 82/112 (73.21%), Query Frame = 3
Query:    3 MMKFASFETIVEMIYKHAVPTPKDQCSKPLQLGISFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGL 338
            MMKFA FE  VE +YK  VP P+ +CSKP QL ++F  GY+AGVFCAIVSHPAD++VS LN  KG++    +K+LG  G++ +GL  RI+MIGTLT  QW IYD+ KV+  L
Sbjct:  231 MMKFACFERTVEALYKFVVPKPRSECSKPEQLVVTFVAGYIAGVFCAIVSHPADSVVSVLNKEKGSSASLVLKRLGFKGVW-KGLFARIIMIGTLTALQWFIYDSVKVYFRL 341          
BLAST of CX078096 vs. ExPASy Swiss-Prot
Match: MPCP_HUMAN (Phosphate carrier protein, mitochondrial OS=Homo sapiens GN=SLC25A3 PE=1 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 9.533e-30
Identity = 64/112 (57.14%), Postives = 82/112 (73.21%), Query Frame = 3
Query:    3 MMKFASFETIVEMIYKHAVPTPKDQCSKPLQLGISFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGL 338
            MMKFA FE  VE +YK  VP P+ +CSKP QL ++F  GY+AGVFCAIVSHPAD++VS LN  KG++    +K+LG  G++ +GL  RI+MIGTLT  QW IYD+ KV+  L
Sbjct:  232 MMKFACFERTVEALYKFVVPKPRSECSKPEQLVVTFVAGYIAGVFCAIVSHPADSVVSVLNKEKGSSASLVLKRLGFKGVW-KGLFARIIMIGTLTALQWFIYDSVKVYFRL 342          
BLAST of CX078096 vs. ExPASy Swiss-Prot
Match: MPCP_RAT (Phosphate carrier protein, mitochondrial OS=Rattus norvegicus GN=Slc25a3 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 6.179e-29
Identity = 62/112 (55.36%), Postives = 81/112 (72.32%), Query Frame = 3
Query:    3 MMKFASFETIVEMIYKHAVPTPKDQCSKPLQLGISFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGL 338
            MMKFA FE  VE +YK  VP P+ +C+K  QL ++F  GY+AGVFCAIVSHPAD++VS LN  KG+T    +++LG  G++ +GL  RI+MIGTLT  QW IYD+ KV+  L
Sbjct:  226 MMKFACFERTVEALYKFVVPKPRSECTKAEQLVVTFVAGYIAGVFCAIVSHPADSVVSVLNKEKGSTASQVLQRLGFRGVW-KGLFARIIMIGTLTALQWFIYDSVKVYFRL 336          
BLAST of CX078096 vs. ExPASy Swiss-Prot
Match: MPCP_MOUSE (Phosphate carrier protein, mitochondrial OS=Mus musculus GN=Slc25a3 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 6.179e-29
Identity = 62/112 (55.36%), Postives = 81/112 (72.32%), Query Frame = 3
Query:    3 MMKFASFETIVEMIYKHAVPTPKDQCSKPLQLGISFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGL 338
            MMKFA FE  VE +YK  VP P+ +C+K  QL ++F  GY+AGVFCAIVSHPAD++VS LN  KG+T    +++LG  G++ +GL  RI+MIGTLT  QW IYD+ KV+  L
Sbjct:  227 MMKFACFERTVEALYKFVVPKPRSECTKAEQLVVTFVAGYIAGVFCAIVSHPADSVVSVLNKEKGSTASQVLQRLGFRGVW-KGLFARIIMIGTLTALQWFIYDSVKVYFRL 337          
BLAST of CX078096 vs. ExPASy Swiss-Prot
Match: MPCP_CAEEL (Phosphate carrier protein, mitochondrial OS=Caenorhabditis elegans GN=F01G4.6 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.798e-28
Identity = 64/112 (57.14%), Postives = 80/112 (71.43%), Query Frame = 3
Query:    3 MMKFASFETIVEMIYKHAVPTPKDQCSKPLQLGISFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGL 338
            MMKFA FE  VE +Y++ VP P+ +CSK  QL ++F  GY+AGVFCAIVSHPAD +VS LN    AT G  +KKLG  G++ +GL  RI+MIGTLT  QW IYD+ KV + L
Sbjct:  210 MMKFACFEKTVEALYQYVVPKPRAECSKAEQLVVTFVAGYIAGVFCAIVSHPADTVVSKLNQDSQATAGGILKKLGFAGVW-KGLVPRIIMIGTLTALQWFIYDSVKVALNL 320          
BLAST of CX078096 vs. ExPASy Swiss-Prot
Match: MPCP_SCHPO (Probable mitochondrial phosphate carrier protein OS=Schizosaccharomyces pombe GN=SPBC1703.13c PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.554e-27
Identity = 67/117 (57.26%), Postives = 83/117 (70.94%), Query Frame = 3
Query:    3 MMKFASFETIVEMIYKHAVPTPKDQCSKPLQLGISFAGGYVAGVFCAIVSHPADNLVSFLNNAK------GATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVG 335
            MMKFASFE IVE +Y + +  PK+  SK  ++GISFAGGY+AGV CAI+SHPAD +VS LN+ K      GA      K++G  GL+  GL +RIVMIGTLTGAQW IYD+FK+  G
Sbjct:  191 MMKFASFERIVEALYTY-IGKPKNMYSKAEKIGISFAGGYMAGVLCAIISHPADVMVSKLNSNKKAGEGAGAAAARIYKEIGFSGLW-NGLGVRIVMIGTLTGAQWLIYDSFKIMCG 305          
BLAST of CX078096 vs. ExPASy Swiss-Prot
Match: PIC2_YEAST (Mitochondrial phosphate carrier protein 2 OS=Saccharomyces cerevisiae GN=PIC2 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.289e-22
Identity = 58/118 (49.15%), Postives = 78/118 (66.10%), Query Frame = 3
Query:    3 MMKFASFETIVEMIYKHAVPTPKDQCSKPLQLGISFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAV------KKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGL 338
            M KF SFE IV+ IY   +P  K++ +   Q+ +SF GGY+AG+ CA VSHPAD +VS +N+ + A    +V      +K+G  GL+  GL +RIVMIGTLT  QW IYD+FK +VGL
Sbjct:  181 MCKFTSFEKIVQKIYS-VLPKKKEEMNALQQISVSFVGGYLAGILCAAVSHPADVMVSKINSERKANESMSVASKRIYQKIGFTGLW-NGLMVRIVMIGTLTSFQWLIYDSFKAYVGL 296          
BLAST of CX078096 vs. ExPASy Swiss-Prot
Match: MCFN_DICDI (Mitochondrial substrate carrier family protein N OS=Dictyostelium discoideum GN=mcfN PE=3 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.336e-15
Identity = 49/119 (41.18%), Postives = 68/119 (57.14%), Query Frame = 3
Query:    3 MMKFASFETIVEMIYKHAVPT--PKDQCSKPLQLGISFAGGYVAGVFCAIVSHPADNLVSFLNNAKG-----ATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGL 338
            M KFA FE   E +YK    +  PK+  +   +L +S   G VAG+  AIVS PAD ++S +N  K        +G+ +++LG+ GLF  GLP R  M+GTLT  Q+ IYD  K  +GL
Sbjct:  176 MAKFAVFEFTAENVYKGLAASGKPKESLTDGQKLSVSLGSGIVAGIVAAIVSQPADTILSKINQEKTDGGVVKAIGNIMRRLGVRGLFL-GLPTRCFMVGTLTAGQFFIYDGIKQMLGL 293          
The following BLAST results are available for this feature:
BLAST of CX078096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
MPCP_CHOFU2.963e-3162.73Phosphate carrier protein, mitochondrial OS=Choris... [more]
MPCP_BOVIN1.921e-3057.14Phosphate carrier protein, mitochondrial OS=Bos ta... [more]
MPCP_PONAB9.533e-3057.14Phosphate carrier protein, mitochondrial OS=Pongo ... [more]
MPCP_HUMAN9.533e-3057.14Phosphate carrier protein, mitochondrial OS=Homo s... [more]
MPCP_RAT6.179e-2955.36Phosphate carrier protein, mitochondrial OS=Rattus... [more]
MPCP_MOUSE6.179e-2955.36Phosphate carrier protein, mitochondrial OS=Mus mu... [more]
MPCP_CAEEL1.798e-2857.14Phosphate carrier protein, mitochondrial OS=Caenor... [more]
MPCP_SCHPO7.554e-2757.26Probable mitochondrial phosphate carrier protein O... [more]
PIC2_YEAST4.289e-2249.15Mitochondrial phosphate carrier protein 2 OS=Sacch... [more]
MCFN_DICDI1.336e-1541.18Mitochondrial substrate carrier family protein N O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_6H10_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-6H10-O20-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078096 ID=CX078096; Name=CX078096; organism=Citrus sinensis; type=EST; length=773bp
CTATGATGAAGTTTGCTTCTTTTGAAACCATTGTTGAGATGATCTACAAG
CATGCAGTTCCCACACCAAAGGACCAGTGCAGCAAACCTCTGCAGCTTGG
AATTAGTTTTGCTGGTGGTTATGTGGCTGGTGTTTTCTGTGCTATTGTGT
CGCATCCTGCTGACAATCTTGTCTCTTTCCTTAACAATGCCAAAGGAGCA
ACTGTTGGTGATGCTGTGAAGAAGCTAGGTTTGTGGGGTCTGTTTACCCG
TGGGCTTCCTCTCCGTATTGTCATGATTGGAACACTCACTGGAGCTCAAT
GGGGAATCTATGATGCATTCAAAGTTTTTGTGGGACTGCCAACCACTGGT
GGTGTTGCTCCTGTTGCTCCTGCCCCTGCTGCTGCTGAGCTTGCAAAGGT
GTAGGTCAACCAAATAGAATTGTTTTATTTTGGGTTTTGTGGATTCCAGG
AGAACTTCTTGATAGGGATTAATAAACATAGGTGACAAAATTGAAGGCGC
TTGAGTGTCTCAAGTCAGAGTATTCTTTATAATTGAGAACTATTTGTTCG
AGCTTAAGATTTGCTTTTGCTGAGGATGGTTTTGTTTTCATCCAAATATC
AGAAAACTTTTGTAGTTAGATTATACATGAAATTTCACTCTGATATCCAG
CTCGCAATCCTCCCCATGAATAGGTGACAAAATAATGTGCAAGGGGAGAG
TACCTAATTTCTCTTCGCAAATGCGTGGAGTGTACGATTATTAGATCATC
ATTACTGCAAAAAAAAAGGGGGG
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