CX077955

Overview
NameCX077955
Unique NameCX077955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length796
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX077955 vs. ExPASy Swiss-Prot
Match: WBS22_MOUSE (Uncharacterized methyltransferase WBSCR22 OS=Mus musculus GN=Wbscr22 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.315e-47
Identity = 95/161 (59.01%), Postives = 112/161 (69.57%), Query Frame = 2
Query:  314 ANRPELIAPPEIFYDDTEARKYTSSSRIIDIQAKLSERALELLALPGDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREVEXXXXXXXXXXXXXXRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIY 796
            + RPE   PPE+FYD  EARKY  +SR+IDIQ K++ERALELL LP +G P  LLDIGCGSGLSG+ +SE GH W+G+DIS +ML+ AL+R+ E              RPG  DG ISISAVQWLCNA+K S  P  RL  FF SLY  L RGARAV Q+Y
Sbjct:    5 SRRPEHSGPPELFYDQNEARKYVRNSRMIDIQTKMTERALELLCLP-EGQPSYLLDIGCGSGLSGDYISEEGHYWVGIDISPAMLDAALDRDTEGDLLLGDMGQGVPFRPGSFDGCISISAVQWLCNANKKSDVPARRLYCFFSSLYSALVRGARAVLQLY 164          
BLAST of CX077955 vs. ExPASy Swiss-Prot
Match: WBS22_DICDI (Probable methyltransferase WBSCR22 homolog OS=Dictyostelium discoideum GN=DDB_G0269722 PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.315e-47
Identity = 90/160 (56.25%), Postives = 115/160 (71.88%), Query Frame = 2
Query:  317 NRPELIAPPEIFYDDTEARKYTSSSRIIDIQAKLSERALELLALPGDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREVEXXXXXXXXXXXXXXRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIY 796
            +RPE IAPPEIFYDD E++KY+S+SRII+IQ K++ERA ELLA+P      +LLDIGCGSG+SG+ +++ GH WIG DISQ ML++A++REVE              R G  D AISISA+QWLCNA+K+ H PR RL  FF SL+  L RG +A+ Q Y
Sbjct:    2 SRPEHIAPPEIFYDDVESKKYSSNSRIIEIQTKMAERAYELLAIPETAEGLMLLDIGCGSGISGDVITDAGHYWIGCDISQHMLDVAIDREVEGDVMLRDIGQGFPFRAGSFDAAISISAIQWLCNAEKSHHNPRKRLHTFFQSLFNVLTRGGKAILQFY 161          
BLAST of CX077955 vs. ExPASy Swiss-Prot
Match: WBS22_HUMAN (Uncharacterized methyltransferase WBSCR22 OS=Homo sapiens GN=WBSCR22 PE=1 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 4.211e-44
Identity = 90/159 (56.60%), Postives = 111/159 (69.81%), Query Frame = 2
Query:  320 RPELIAPPEIFYDDTEARKYTSSSRIIDIQAKLSERALELLALPGDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREVEXXXXXXXXXXXXXXRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIY 796
            RPE   PPE+FYD+TEARKY  +SR+IDIQ +++ RALELL LP +  P  LLDIGCG+GLSG  LS+ GH W+GLDIS +ML+ A++RE+E              +PG  DG ISISAVQWLCNA+K S  P  RL  FF SL+  L RG+RAV Q+Y
Sbjct:    7 RPEHGGPPELFYDETEARKYVRNSRMIDIQTRMAGRALELLYLP-ENKPCYLLDIGCGTGLSGSYLSDEGHYWVGLDISPAMLDEAVDREIEGDLLLGDMGQGIPFKPGTFDGCISISAVQWLCNANKKSENPAKRLYCFFASLFSVLVRGSRAVLQLY 164          
BLAST of CX077955 vs. ExPASy Swiss-Prot
Match: WBS22_BOVIN (Uncharacterized methyltransferase WBSCR22 OS=Bos taurus GN=WBSCR22 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.769e-42
Identity = 87/159 (54.72%), Postives = 108/159 (67.92%), Query Frame = 2
Query:  320 RPELIAPPEIFYDDTEARKYTSSSRIIDIQAKLSERALELLALPGDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREVEXXXXXXXXXXXXXXRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIY 796
            RPEL  PPE++YD  EARKY  +SR+ID+Q K++ RALELL +P D  P  +LDIGCG+GLSG+ LS+ GH W+G+DIS +ML+ AL+RE +              +PG  D  ISISAVQWLCNA+K S  P  RL  FF SLY  L RG RAV Q+Y
Sbjct:    7 RPELRGPPELYYDKNEARKYVRNSRMIDVQIKMTGRALELLCVPEDK-PCYVLDIGCGTGLSGDYLSDEGHYWVGIDISPAMLDEALDRETQGDVILGDMGQGIPFKPGTFDACISISAVQWLCNANKKSDIPAKRLYCFFSSLYSVLVRGGRAVLQLY 164          
BLAST of CX077955 vs. ExPASy Swiss-Prot
Match: BUD23_YEAST (Putative methyltransferase BUD23 OS=Saccharomyces cerevisiae GN=BUD23 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.312e-37
Identity = 85/161 (52.80%), Postives = 105/161 (65.22%), Query Frame = 2
Query:  317 NRPELIAPPEIFYDDTEARKYTSSSRIIDIQAKLSERALELLALPGDGVPRLLLDIGCGSGLSGETLSENG-HQWIGLDISQSMLNIALEREVEXXXXXXXXXXXXXXRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIY 796
            +RPE +APPEIFY+D+EA KYT S+R+  IQAK++ RALELL L        +LDIGCGSGLSGE L++ G H W GLDIS SML   L RE+E              R G  D AISISA+QWLCNAD + ++P+ RL  FF +LY  L +G + V Q Y
Sbjct:    2 SRPEELAPPEIFYNDSEAHKYTGSTRVQHIQAKMTLRALELLNLQPCS---FILDIGCGSGLSGEILTQEGDHVWCGLDISPSMLATGLSRELEGDLMLQDMGTGIPFRAGSFDAAISISAIQWLCNADTSYNDPKQRLMRFFNTLYAALKKGGKFVAQFY 159          
BLAST of CX077955 vs. ExPASy Swiss-Prot
Match: YAU6_SCHPO (Putative methyltransferase C26A3.06 OS=Schizosaccharomyces pombe GN=SPAC26A3.06 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.238e-37
Identity = 84/161 (52.17%), Postives = 106/161 (65.84%), Query Frame = 2
Query:  317 NRPELIAPPEIFYDDTEARKYTSSSRIIDIQAKLSERALELLALPGDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALE-REVEXXXXXXXXXXXXXXRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIY 796
            +RPE IAPPEIFY+D EA KY++++RI  IQ ++SERALELL   G   P  +LDIGCGSG+S +     GH  +G+DIS SML++ALE +E+E              RPG  DG ISISA+QWL NADK  + P+ RL  FF +LY  + RG RAV Q Y
Sbjct:    2 SRPEHIAPPEIFYNDVEAGKYSTNTRIQSIQTEMSERALELLDAEG---PSFILDIGCGSGISTQIGESQGHVVVGMDISPSMLSVALESQEIEGDLLLCDMGTGVPFRPGTFDGVISISAIQWLLNADKTCNVPQRRLNRFFQTLYISMKRGGRAVMQYY 159          
The following BLAST results are available for this feature:
BLAST of CX077955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
WBS22_MOUSE5.315e-4759.01Uncharacterized methyltransferase WBSCR22 OS=Mus m... [more]
WBS22_DICDI5.315e-4756.25Probable methyltransferase WBSCR22 homolog OS=Dict... [more]
WBS22_HUMAN4.211e-4456.60Uncharacterized methyltransferase WBSCR22 OS=Homo ... [more]
WBS22_BOVIN1.769e-4254.72Uncharacterized methyltransferase WBSCR22 OS=Bos t... [more]
BUD23_YEAST1.312e-3752.80Putative methyltransferase BUD23 OS=Saccharomyces ... [more]
YAU6_SCHPO2.238e-3752.17Putative methyltransferase C26A3.06 OS=Schizosacch... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_6A08_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-6A08-A16-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX077955 ID=CX077955; Name=CX077955; organism=Citrus sinensis; type=EST; length=796bp
CCTCACCACTCACCAGCAGCCGCAACCTTCAAATCTCTAACGCCGGCCAA
ATCTGAAGGGCTTGTAACGCCGTCGACCGGTCGCCGTCTTCCTTGCAGCC
TCGCCTGAGCCTCGCGTCGCAGCCTCGCCTGAGCACGTTGCTATCGCTGC
ACACTGCAAGCCTTGCCGTCGTCGCCTCCCCTGAGCACGTTGCTGTCGCT
GCACACTGCAAGCCTTGCTGTCGTTGAAGCTCGCCACACCGCTGTTGCTG
CACGCGTCACCCACGTCACCATCGTCCAAACCTCGCCTGATTGGATCATT
CGTGCCTGAGATGGCAAACCGGCCGGAGTTAATAGCGCCACCTGAGATAT
TCTATGATGATACTGAAGCTCGGAAATACACGTCCTCTTCTCGTATCATC
GACATTCAGGCAAAGCTTTCGGAGAGAGCATTAGAGCTGCTTGCTTTGCC
TGGTGATGGGGTCCCCAGATTACTTCTTGATATCGGTTGTGGATCAGGTC
TTAGTGGTGAGACACTATCTGAGAACGGGCACCAATGGATTGGTCTAGAC
ATTTCCCAGTCAATGCTTAATATTGCTTTGGAGCGAGAGGTTGAGGGTGA
TCTATTACTTGGAGACATGGGTCAGGGCTTGGGACTTCGGCCTGGAGTTG
TTGACGGGGCCATCAGTATATCGGCCGTTCAGTGGTTATGTAATGCTGAC
AAGGCCTCACATGAGCCACGATTAAGATTGAAGGCTTTCTTTGGGTCATT
ATATAGATGCTTGGCGAGGGGAGCAAGAGCAGTATTTCAGATATAT
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