CX077954

Overview
NameCX077954
Unique NameCX077954
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length872
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX077954 vs. ExPASy Swiss-Prot
Match: WBS22_MOUSE (Uncharacterized methyltransferase WBSCR22 OS=Mus musculus GN=Wbscr22 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.569e-34
Identity = 87/174 (50.00%), Postives = 105/174 (60.34%), Query Frame = -2
Query:  347 ISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAGGVVVDYPHSSKSRKEFLVLTCGPPSISSEAPKGKVGXXXXXXXXXXXXXXENRTVCISDRHRPRXXXXXXXXXKGREWVLKKKEQMRRKGCAVPPDTKYTARKRKARF 868
            ISISAVQWLCNA+K S  P  RL  FF SLY  L RGARAV Q+YPE+  Q ELI   A RAGF GGVVVD+P+S+K++K +L L  GP   S+  PKG                  + ++  S+R  P          K REWVL+KKE+ RR+G  V PDT+YT RKRK RF
Sbjct:  120 ISISAVQWLCNANKKSDVPARRLYCFFSSLYSALVRGARAVLQLYPENSEQLELITTQATRAGFTGGVVVDFPNSAKAKKFYLCLFSGP---STSLPKG--------LTESQDADQASESMFTSER-APHKKARRDLVKKSREWVLEKKERRRRQGKEVRPDTQYTGRKRKPRF 281          
BLAST of CX077954 vs. ExPASy Swiss-Prot
Match: WBS22_BOVIN (Uncharacterized methyltransferase WBSCR22 OS=Bos taurus GN=WBSCR22 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.271e-32
Identity = 85/174 (48.85%), Postives = 101/174 (58.05%), Query Frame = -2
Query:  347 ISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAGGVVVDYPHSSKSRKEFLVLTCGPPSISSEAPKGKVGXXXXXXXXXXXXXXENRTVCISDRHRPRXXXXXXXXXKGREWVLKKKEQMRRKGCAVPPDTKYTARKRKARF 868
            ISISAVQWLCNA+K S  P  RL  FF SLY  L RG RAV Q+YPE+  Q ELI   A RAGF GGVVVDYP+S+K++K +L L  GP   S+  P+G                    +   +DR  P          K REWVL+KK + RR+G  V PDT+YT RKRK RF
Sbjct:  120 ISISAVQWLCNANKKSDIPAKRLYCFFSSLYSVLVRGGRAVLQLYPENSEQLELITTQATRAGFTGGVVVDYPNSAKAKKFYLCLFSGP---STSLPEG--------LSEDTEEEKPAESTFTADR-IPYRIARRGVVRKSREWVLEKKARRRRQGKEVCPDTQYTGRKRKPRF 281          
BLAST of CX077954 vs. ExPASy Swiss-Prot
Match: WBS22_HUMAN (Uncharacterized methyltransferase WBSCR22 OS=Homo sapiens GN=WBSCR22 PE=1 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 5.579e-32
Identity = 82/174 (47.13%), Postives = 103/174 (59.20%), Query Frame = -2
Query:  347 ISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAGGVVVDYPHSSKSRKEFLVLTCGPPSISSEAPKGKVGXXXXXXXXXXXXXXENRTVCISDRHRPRXXXXXXXXXKGREWVLKKKEQMRRKGCAVPPDTKYTARKRKARF 868
            ISISAVQWLCNA+K S  P  RL  FF SL+  L RG+RAV Q+YPE+  Q ELI   A +AGF+GG+VVDYP+S+K++K +L L  GP   S+  P+G                 E R    ++   P          K R WVL+KKE+ RR+G  V PDT+YT RKRK RF
Sbjct:  120 ISISAVQWLCNANKKSENPAKRLYCFFASLFSVLVRGSRAVLQLYPENSEQLELITTQATKAGFSGGMVVDYPNSAKAKKFYLCLFSGP---STFIPEG---------LSENQDEVEPRESVFTNERFPLRMSRRGMVRKSRAWVLEKKERHRRQGREVRPDTQYTGRKRKPRF 281          
BLAST of CX077954 vs. ExPASy Swiss-Prot
Match: WBS22_DICDI (Probable methyltransferase WBSCR22 homolog OS=Dictyostelium discoideum GN=DDB_G0269722 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.344e-30
Identity = 74/178 (41.57%), Postives = 108/178 (60.67%), Query Frame = -2
Query:  347 AISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAGGVVVDYPHSSKSRKEFLVLTCGPPSISSEAPKGKVGXXXXXXXXXXXXXXENRTVCISDRHRPR---XXXXXXXXXKGREWVLKKKEQMRRKGCAVPPDTKYTARKRKARF 871
            AISISA+QWLCNA+K+ H PR RL  FF SL+  L RG +A+ Q YPE+ AQ E+I  +A+R GF+GG+++D+P+SSK++K FLVL  G  +I   A KG  G              ++  V  S+R R R            K +EW++ KK++ R++G  +  D+K++ RKR  +F
Sbjct:  116 AISISAIQWLCNAEKSHHNPRKRLHTFFQSLFNVLTRGGKAILQFYPENSAQIEMITASALRCGFSGGLLIDFPNSSKAKKYFLVLFTGNNNIMPSA-KGVEG-----EEYEQQEEEDSNEVKYSNRKRDRRRVTKSKGSAQHKTKEWIMNKKDRQRKQGREIKNDSKFSGRKRGPKF 287          
BLAST of CX077954 vs. ExPASy Swiss-Prot
Match: BUD23_YEAST (Putative methyltransferase BUD23 OS=Saccharomyces cerevisiae GN=BUD23 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.471e-24
Identity = 68/175 (38.86%), Postives = 100/175 (57.14%), Query Frame = -2
Query:  347 AISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAGGVVVDYPHSSKSRKEFLVLTCGPPSISSEAPKGKVGXXXXXXXXXXXXXXENRTVCISDRHRPRXXXXXXXXXKGREWVLKKKEQMRRKGCAVPPDTKYTARKRKARF 871
            AISISA+QWLCNAD + ++P+ RL  FF +LY  L +G + V Q YP++  Q + IL +A  AGF+GG+VVD P S K++K +LVL+ G P      P+G+                +   V +  + R R           + ++L+KKE M+R+G  V  D+K+T RKR+ RF
Sbjct:  114 AISISAIQWLCNADTSYNDPKQRLMRFFNTLYAALKKGGKFVAQFYPKNDDQVDDILQSAKVAGFSGGLVVDDPESKKNKKYYLVLSSGAP------PQGE------EQVNLDGVTMDEENVNLKKQLRQR-LKGGKDKESAKSFILRKKELMKRRGRKVAKDSKFTGRKRRHRF 275          
BLAST of CX077954 vs. ExPASy Swiss-Prot
Match: YAU6_SCHPO (Putative methyltransferase C26A3.06 OS=Schizosaccharomyces pombe GN=SPAC26A3.06 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.775e-23
Identity = 64/175 (36.57%), Postives = 92/175 (52.57%), Query Frame = -2
Query:  347 ISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAGGVVVDYPHSSKSRKEFLVLTCGPPSISSEAPKGKVGXXXXXXXXXXXXXXENRTVCISDRHRPRXXXXXXXXXKGREWVLKKKEQMRRKG-CAVPPDTKYTARKRKARF 868
            ISISA+QWL NADK  + P+ RL  FF +LY  + RG RAV Q YPE+   +++I+  A +AGFAGG+VVD+P S + +K +LVL  G                             + T+     +  +           RE+++ KKE  R++G   VP D+KY+ R+RKA F
Sbjct:  115 ISISAIQWLLNADKTCNVPQRRLNRFFQTLYISMKRGGRAVMQYYPETEKSQQMIMDTARKAGFAGGIVVDHPESKRQKKYYLVLQAG---------------------GTRTLDISSMTLDQEGTNAKQRKLKKKQDMSTREYIIHKKELNRKRGRLHVPKDSKYSGRRRKAAF 268          
The following BLAST results are available for this feature:
BLAST of CX077954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
WBS22_MOUSE1.569e-3450.00Uncharacterized methyltransferase WBSCR22 OS=Mus m... [more]
WBS22_BOVIN3.271e-3248.85Uncharacterized methyltransferase WBSCR22 OS=Bos t... [more]
WBS22_HUMAN5.579e-3247.13Uncharacterized methyltransferase WBSCR22 OS=Homo ... [more]
WBS22_DICDI2.344e-3041.57Probable methyltransferase WBSCR22 homolog OS=Dict... [more]
BUD23_YEAST1.471e-2438.86Putative methyltransferase BUD23 OS=Saccharomyces ... [more]
YAU6_SCHPO2.775e-2336.57Putative methyltransferase C26A3.06 OS=Schizosacch... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_6A08_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-6A08-A16-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX077954 ID=CX077954; Name=CX077954; organism=Citrus sinensis; type=EST; length=872bp
CTTTAGACAGATGTTACTCGCATTCTGAATTGTGCAAATGCATCGAATTG
TAAATTATACACCCGCATAATTCAAACAATTTATCCAAAATTTTTGCAGA
TGCTCAGAAAGCAAATGCCTGAAAGAGTTAACCAAACATACTAGTACATT
AGGTTGTACATAAATAACCAAGTCCTACCGTCAGCTCCCACACAAAGATG
ACCGACTAATGTTTGTATTGTGATCTTCCACCCAGATGACTTCTAACTTC
ATCAGGCTTAATAGAAGAAAGCTCGTCACTTGAAAGAATCAACACAGATT
GGAATGTGAAAGAGGAAGGAAGAACAAACTTCCCTTCAGAAGATCAAAAG
CGAGCCTTCCGTTTTCTAGCTGTGTACTTTGTGTCGGGAGGCACAGCACA
TCCTTTTCTTCTCATTTGTTCCTTCTTCTTCAGCACCCACTCTCTACCTT
TCCCTTTCTTTGTTATTTTCTGCTTTTTCCTGGGTCTGTGCCTGTCTGAA
ATGCATACCGTTCGATTTTCTTCATCCCCACTACTTTCATCATCAGAGCA
ACTCTCCATGTCTCCAACTTTTCCCTTTGGAGCCTCTGAGCTTATGGATG
GTGGACCACATGTGAGGACTAGAAATTCTTTTCTACTTTTGGAACTATGT
GGGTAGTCAACAACAACACCACCAGCAAAACCAGCTCGCATAGCAGCACC
CAATATCAACTCACGCTGGGCTACACTTTCAGGATATATCTGAAATACTG
CTCTTGCTCCCCTCGCCAAGCATCTATATAATGACCCAAAGAAAGCCTTC
AATCTTAATCGTGGCTCATGTGAGGCCTTGTCAGCATTACATAACCACTG
AACGGCCGATATACTGATGGCC
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