CX077933

Overview
NameCX077933
Unique NameCX077933
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length778
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2848 contig Csv1_Contig2848:43..820. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX077933 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.088e-57
Identity = 107/189 (56.61%), Postives = 141/189 (74.60%), Query Frame = -3
Query:  237 QLIKLAEKLSELMCENLGLEKSYIKNAFSGEKGPSVGTKVAKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISPA-----------IKLLYPSYYSFQDYLKLYGTTKFSDKVPRLESMK 770
            +L KLAE+L +L+CENLGLEKSY+KN F G KGP+ GTKV+ YP CP P+L++GLR HTDAGGIILL QDD+V GL+  KDG W+ +PP R ++I VN GDQ+EV++NG+Y+S +HRV+ +K+G+R+S+A+FYNP NDA+I PA            K +YP  + F DY+KLY   KF  K PR E+MK
Sbjct:  120 RLEKLAEELLDLLCENLGLEKSYLKNTFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGRWIDVPPMR-HSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGTRMSLASFYNPGNDALIYPAPALVDKEAEEHNKQVYPK-FMFDDYMKLYANLKFQAKEPRFEAMK 306          
BLAST of CX077933 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.424e-57
Identity = 106/188 (56.38%), Postives = 142/188 (75.53%), Query Frame = -3
Query:  237 QLIKLAEKLSELMCENLGLEKSYIKNAFSGEKGPSVGTKVAKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISPA----------IKLLYPSYYSFQDYLKLYGTTKFSDKVPRLESMK 770
            +L KLAE+L +L+CENLGLEK Y+KNAF G KGP+ GTKV+ YP CP P+L++GLR HTDAGGIILL QDD+V GL+  KDG+W+ +PP R ++I VN GDQ+EV++NG+Y+S +HRV+ +K+G+R+S+A+FYNP +DA+I PA           K +YP +  F DY+KLY   KF  K PR E+MK
Sbjct:  120 RLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMR-HSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFV-FDDYMKLYAGLKFQAKEPRFEAMK 305          
BLAST of CX077933 vs. ExPASy Swiss-Prot
Match: ACCO2_MALDO (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.166e-57
Identity = 107/186 (57.53%), Postives = 141/186 (75.81%), Query Frame = -3
Query:  237 QLIKLAEKLSELMCENLGLEKSYIKNAFSGEKGPSVGTKVAKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISPAIKLL------YPSY--YSFQDYLKLYGTTKFSDKVPRLESMK 770
            +L KLAEKL +L+CENLGLEK Y+K AF G KGP+ GTKV+ YP CP P+L++GLR HTDAGGIILL QDD+V GL+  KDGEW+ +PP  +++I +N GDQ+EV++NG+Y+S +HRV+ + +G+R+SIA+FYNP +DA ISPA  LL       P+Y  + F DY+KLY   KF  K PR E+MK
Sbjct:  120 ELEKLAEKLLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWMDVPPV-HHSIVINLGDQIEVITNGKYKSIMHRVIAQSDGTRMSIASFYNPGDDAFISPAPALLEEKSEVSPTYPKFLFDDYMKLYSGLKFQAKEPRFEAMK 304          
BLAST of CX077933 vs. ExPASy Swiss-Prot
Match: ACCO4_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 4.135e-57
Identity = 105/184 (57.07%), Postives = 140/184 (76.09%), Query Frame = -3
Query:  237 QLIKLAEKLSELMCENLGLEKSYIKNAFSGEKGPSVGTKVAKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISPAIKLL------YPSYYSFQDYLKLYGTTKFSDKVPRLESMK 770
            +L KLAE+L +L+CENLGLEK Y+KNAF G KGP+ GTKV+ YP CP P+L++GLR HTDAGGIILL QDD+V GL+  KD +W+ +PP R ++I VN GDQ+EV++NG+Y+S +HRV+ + +G+R+S+A+FYNP NDA+I PA  L+      YP +  F DY+KLY   KF  K PR E+MK
Sbjct:  120 RLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDEQWIDVPPMR-HSIVVNLGDQLEVITNGKYKSVMHRVIAQTDGTRMSLASFYNPGNDAVIYPAPSLIEESKQVYPKFV-FDDYMKLYAGLKFQPKEPRFEAMK 301          
BLAST of CX077933 vs. ExPASy Swiss-Prot
Match: ACCO1_BRAJU (1-aminocyclopropane-1-carboxylate oxidase OS=Brassica juncea GN=ACO PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 5.401e-57
Identity = 106/183 (57.92%), Postives = 137/183 (74.86%), Query Frame = -3
Query:  237 QLIKLAEKLSELMCENLGLEKSYIKNAFSGEKGPSVGTKVAKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISPAIKLL-----YPSYYSFQDYLKLYGTTKFSDKVPRLESMK 770
            +L  LAE L +L+CENLGLEK Y+K  F G KGP+ GTKV+ YP CP PE+++GLR HTDAGGIILL QDD+V GL+  KDG+W+ +PP  N++I +N GDQ+EV++NGRY+S +HRV+ +K G+R+SIA+FYNP +DA ISPA  L      YPS+  F DY+KLY   KF  K PR E+MK
Sbjct:  123 RLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVSNYPACPKPEMIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGDWIDVPP-LNHSIVINLGDQLEVITNGRYKSMMHRVVTQKEGNRMSIASFYNPGSDAEISPASSLACKETEYPSFV-FDDYMKLYAGVKFQPKEPRFEAMK 303          
BLAST of CX077933 vs. ExPASy Swiss-Prot
Match: ACCO1_MALDO (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 9.213e-57
Identity = 105/186 (56.45%), Postives = 140/186 (75.27%), Query Frame = -3
Query:  237 QLIKLAEKLSELMCENLGLEKSYIKNAFSGEKGPSVGTKVAKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISPAIKLL------YPSY--YSFQDYLKLYGTTKFSDKVPRLESMK 770
            +L KLAEKL +L+CENLGLEK Y+K  F G KGP+ GTKV+ YP CP P+L++GLR H+DAGGIILL QDD+V GL+  KDGEWV +PP  +++I +N GDQ+EV++NG+Y+S +HRV+ + +G+R+SIA+FYNP ND+ ISPA  +L       P+Y  + F DY+KLY   KF  K PR E+MK
Sbjct:  120 ELEKLAEKLLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHSDAGGIILLFQDDKVSGLQLLKDGEWVDVPP-MHHSIVINLGDQIEVITNGKYKSVMHRVIAQSDGTRMSIASFYNPGNDSFISPAPAVLEKKTEDAPTYPKFVFDDYMKLYSGLKFQAKEPRFEAMK 304          
BLAST of CX077933 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.681e-56
Identity = 105/189 (55.56%), Postives = 140/189 (74.07%), Query Frame = -3
Query:  237 QLIKLAEKLSELMCENLGLEKSYIKNAFSGEKGPSVGTKVAKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISPA-----------IKLLYPSYYSFQDYLKLYGTTKFSDKVPRLESMK 770
            +L KLAE+L +L+CENLGLEK Y+K AF G KGP+ GTKV+ YP CP P+L++GLR HTDAGGIILL QDD+V GL+  KDG+W+ +PP R ++I VN GDQ+EV++NG+Y+S LHRV+ + +G+R+S+A+FYNP +DA+I PA            K +YP +  F DY+KLY   KF  K PR E+MK
Sbjct:  120 RLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMR-HSIVVNLGDQLEVITNGKYKSVLHRVIAQTDGTRMSLASFYNPGSDAVIYPAPTLVEKEADQECKQVYPKFV-FDDYMKLYAGLKFQAKEPRFEAMK 306          
BLAST of CX077933 vs. ExPASy Swiss-Prot
Match: ACCO_ACTDE (1-aminocyclopropane-1-carboxylate oxidase OS=Actinidia deliciosa GN=ACO PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 5.972e-56
Identity = 103/192 (53.65%), Postives = 143/192 (74.48%), Query Frame = -3
Query:  225 QLIKLAEKLSELMCENLGLEKSYIKNAFSGEKGPSVGTKVAKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISPA----------IKLLYPSYYSFQDYLKLYGTTKFSDKVPRLESMKEIAN 770
            +L KLAE+L +L+CEN+GLEK Y+K AF G KGP+ GTKV+ YP CP PEL++GLR HTDAGGIILL QD++V GL+  KDGEW+ +PP + ++I +N GDQ+EV++NG+Y+S +HRV+ + +G+R+SIA+FYNP +DA++ PA           K +YP +  F+DY+KLY   KF  K PR E+MK + N
Sbjct:  120 KLEKLAEQLLDLLCENVGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPRPELIKGLRAHTDAGGIILLFQDNKVSGLQLLKDGEWIDVPPMK-HSIVINIGDQLEVITNGKYKSVMHRVIAQPDGNRMSIASFYNPGSDAVMYPAPALVDKEEDQQKQVYPKFV-FEDYMKLYAGLKFQAKEPRFEAMKAMEN 309          
BLAST of CX077933 vs. ExPASy Swiss-Prot
Match: ACCO1_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2)

HSP 1 Score: 217.624 bits (553), Expect = 5.972e-56
Identity = 105/188 (55.85%), Postives = 140/188 (74.47%), Query Frame = -3
Query:  237 QLIKLAEKLSELMCENLGLEKSYIKNAFSGEKGPSVGTKVAKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISPAIKL----------LYPSYYSFQDYLKLYGTTKFSDKVPRLESMK 770
            +L KLAE+L +L+CENLGLEK Y+KNAF G KGP+ GTKV+ YP CP P+L++GLR HTDAGGIILL QDD+V GL+  KD +W+ +PP R ++I VN GDQ+EV++NG+Y+S LHRV+ + +G+R+S+A+FYNP +DA+I PA  L          +YP +  F DY+KLY   KF  K PR E+MK
Sbjct:  120 RLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDEQWIDVPPMR-HSIVVNLGDQLEVITNGKYKSVLHRVIAQTDGTRMSLASFYNPGSDAVIYPAKTLVEKEAEESTQVYPKFV-FDDYMKLYAGLKFQAKEPRFEAMK 305          
BLAST of CX077933 vs. ExPASy Swiss-Prot
Match: ACCO_DIACA (Probable 1-aminocyclopropane-1-carboxylate oxidase OS=Dianthus caryophyllus GN=ACO PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.019e-55
Identity = 103/188 (54.79%), Postives = 142/188 (75.53%), Query Frame = -3
Query:  237 AQLIKLAEKLSELMCENLGLEKSYIKNAFSGEKGPSVGTKVAKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISPAIKLL---------YPSYYSFQDYLKLYGTTKFSDKVPRLESMK 773
            AQ+ +L+E+L +L+CENLGLEK+Y+KNAF G  GP+ GTKV+ YP CP P+L++GLR HTDAGGIILL QDD+V GL+  KDG WV +PP + ++I VN GDQ+EV++NG+Y+S +HRV+ + +G+R+SIA+FYNP +DA+I PA  L+         YP +  F+DY+ LY   KF +K PR E+MK
Sbjct:  125 AQIERLSEQLLDLLCENLGLEKAYLKNAFYGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGHWVDVPPMK-HSIVVNLGDQLEVITNGKYKSVMHRVIAQTDGNRMSIASFYNPGSDAVIYPAPTLVEKEEEKCRAYPKFV-FEDYMNLYLKLKFQEKEPRFEAMK 310          
The following BLAST results are available for this feature:
BLAST of CX077933 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
ACCO2_SOLLC1.088e-5756.611-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
ACCO1_PETHY2.424e-5756.381-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
ACCO2_MALDO3.166e-5757.531-aminocyclopropane-1-carboxylate oxidase 2 OS=Mal... [more]
ACCO4_SOLLC4.135e-5757.071-aminocyclopropane-1-carboxylate oxidase 4 OS=Sol... [more]
ACCO1_BRAJU5.401e-5757.921-aminocyclopropane-1-carboxylate oxidase OS=Brass... [more]
ACCO1_MALDO9.213e-5756.451-aminocyclopropane-1-carboxylate oxidase 1 OS=Mal... [more]
ACCO3_PETHY2.681e-5655.561-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
ACCO_ACTDE5.972e-5653.651-aminocyclopropane-1-carboxylate oxidase OS=Actin... [more]
ACCO1_SOLLC5.972e-5655.851-aminocyclopropane-1-carboxylate oxidase 1 OS=Sol... [more]
ACCO_DIACA1.019e-5554.79Probable 1-aminocyclopropane-1-carboxylate oxidase... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_5H07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-5H07-O13-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX077933 ID=CX077933; Name=CX077933; organism=Citrus sinensis; type=EST; length=778bp
TATAACCTTATTAGTATATTCATCAGTATAGATGAATGATAAACATAGGA
AATAGAAAGTGTCATTTTCATCTCCTTTAGAATTTAACAACATAACTCTT
TATGCTAGTTAAGAATTTAAAGAACATATTCTATGCAGAAAACATAACAG
CATCAAACTGATGATCCCTTACATAGCAATCATTTAAGTAGTCGATAATT
TTATGAAAGGAGGATCTGGTGTCCATTGGCAATCTCCTTCATGGATTCAA
GTCTAGGGACCTTGTCTGAGAACTTGGTGGTGCCGTAAAGCTTCAGGTAG
TCTTGAAAACTGTAGTAACTGGGGTATAAGAGTTTGATAGCTGGAGAAAT
AATAGCATCGTTAGCAGGATTATAGAAGGTTGCAATGGAGAGTCTGCTTC
CATTCTTTTCAGGCATGACGCGGTGCAAAGCACTTTGATACCTCCCATTA
CTCAAAACTTCCACTTGGTCACCTGTGTTAACAAATATGGTGTTGTTTCT
GGATGGAGGGATCTTTACCCACTCTCCATCTTTGAAAAATTCAAGACCTG
GAACTTGGTCATCTTGGAGCAAGAGGATGATTCCACCCGCGTCAGTGTGT
TCTCGTAGTCCTCTGACGAGTTCCGGATAAGGACATTGAGGGTATTTTGC
TACTTTTGTCCCCACAGAAGGACCCTTTTCCCCTGAGAATGCATTCTTTA
TGTAACTCTTCTCTAAACCAAGATTCTCACACATGAGCTCAGAAAGCTTC
TCTGCTAGCTTTATTAGTTGAGCTATGT
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